BLASTX nr result
ID: Rehmannia23_contig00022317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00022317
(584 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL31683.1|AC092390_4 putative polyprotein [Oryza sativa Japo... 173 2e-58
gb|AEV42258.1| hypothetical protein [Beta vulgaris] 175 5e-57
gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [... 172 9e-57
gb|EOY00066.1| Retrotransposon protein [Theobroma cacao] 170 2e-56
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 167 3e-56
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 170 3e-56
emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group] gi|1... 167 6e-56
emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group] 167 6e-56
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 170 6e-56
gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] 169 8e-56
gb|ABF97102.1| retrotransposon protein, putative, Ty3-gypsy subc... 170 1e-55
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc... 166 1e-55
gb|AAK92672.1|AC090714_5 putative polyprotein [Oryza sativa Japo... 170 1e-55
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum] 167 1e-55
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao] 168 2e-55
gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subc... 165 2e-55
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 164 3e-55
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 164 3e-55
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 164 3e-55
emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group] 164 3e-55
>gb|AAL31683.1|AC092390_4 putative polyprotein [Oryza sativa Japonica Group]
gi|108709934|gb|ABF97729.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 962
Score = 173 bits (438), Expect(2) = 2e-58
Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
+EDIP T F IRY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSK
Sbjct: 426 QEDIPKTAFVIRYGLYEFTVMAFGLTNAPAYFMNLMNKIFMEYLDQFVVVFIDDILIYSK 485
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
N E+H++HL VLE L Q +L K K EFWLD+V FLG ++T +G+ + QK+K +
Sbjct: 486 NEEEHKQHLRLVLEKLRQHQLYAKLSKCEFWLDQVAFLGHIITKEGVAVDPQKIKA-VME 544
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
W P + +E+ SFLG+ GYYRRFIK FS IA MT
Sbjct: 545 WKTPTSVSEIRSFLGLAGYYRRFIKDFSAIAKPMT 579
Score = 79.0 bits (193), Expect(2) = 2e-58
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GAS+FSKIDLRSGYHQLK++++ P
Sbjct: 386 VTIKNKYPLPRIDDLFDQLKGASIFSKIDLRSGYHQLKIRQEDIP 430
>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 175 bits (443), Expect(2) = 5e-57
Identities = 88/155 (56%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
+ DIP T FR RY HYEFTVMPFGL+NA A+FM+LMNR+F PYLD+FV+VFID IL YSK
Sbjct: 694 DHDIPKTAFRTRYGHYEFTVMPFGLTNAPAVFMDLMNRIFRPYLDKFVVVFIDDILIYSK 753
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
N+E+HE HL +L+TL +L K K EFWL+RV FLG ++ +G+ + K+K +
Sbjct: 754 NKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVSFLGHFISKEGVLVDPAKIKA-VSE 812
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
W P N ++ SFLG+ GYYRRF+K FS IA MT
Sbjct: 813 WPTPKNVTDIRSFLGLAGYYRRFVKDFSKIAKPMT 847
Score = 72.4 bits (176), Expect(2) = 5e-57
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKV 119
+T+KNKYPLPRI+DLFDQL GA +FSKIDLRSGYHQL++
Sbjct: 654 VTVKNKYPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRI 692
>gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [Prunus persica]
Length = 747
Score = 172 bits (435), Expect(2) = 9e-57
Identities = 87/148 (58%), Positives = 109/148 (73%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
EED+P T FR RY HYEF VMPFGL+N A FM+LMNRVF YLD+FVIVFID IL YSK
Sbjct: 470 EEDVPKTAFRTRYGHYEFLVMPFGLTNVPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSK 529
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
+++ H KHL+ VL TL + +L K KY+FWLDRV FLG V++ +GI + QK++
Sbjct: 530 SQKAHMKHLNLVLRTLRRRQLYAKFGKYQFWLDRVSFLGHVISAEGIYVDPQKIEA-VVN 588
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFS 565
WL P + E+ SFLG+ GYYRRF++GFS
Sbjct: 589 WLRPTSITEIRSFLGLAGYYRRFVEGFS 616
Score = 74.7 bits (182), Expect(2) = 9e-57
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+T++N+YPLPRI+DLFDQL GA VFSKIDLRSGYHQL+V+++ P
Sbjct: 430 ITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVP 474
>gb|EOY00066.1| Retrotransposon protein [Theobroma cacao]
Length = 381
Score = 170 bits (431), Expect(2) = 2e-56
Identities = 86/149 (57%), Positives = 109/149 (73%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
E+D+P T FR RY HYEF VMPFGL+NA A+FM+LMNRVF+PYLD+FVIVFID IL YSK
Sbjct: 185 EQDVPKTAFRTRYGHYEFLVMPFGLTNAPAVFMDLMNRVFHPYLDKFVIVFIDDILVYSK 244
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
N ++H HL VL+TL + +L K K EFWL VVFLG VV+ GI + +K++ +
Sbjct: 245 NDDEHAAHLRIVLQTLRERQLYAKFSKCEFWLKEVVFLGHVVSGAGIYVDPKKIEA-ILQ 303
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFSI 568
W P E+ SFLG+ GYYRRF++GFS+
Sbjct: 304 WEQPRTVTEIRSFLGLAGYYRRFVQGFSL 332
Score = 75.1 bits (183), Expect(2) = 2e-56
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGY+QL++K++ P
Sbjct: 145 VTIKNKYPLPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVP 189
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 167 bits (422), Expect(2) = 3e-56
Identities = 83/149 (55%), Positives = 108/149 (72%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
E+D+P T FR RY HYEF VMPFGL+NA A FM+LMNRVF+PYLD+FVIVFID IL YS+
Sbjct: 679 EQDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFHPYLDKFVIVFIDDILVYSR 738
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
+ ++H HL VL+TL + +L K K EFWL VVFLG +V+ GI + +K++ +
Sbjct: 739 DNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVFLGHIVSRTGIYVDPKKVEA-ILQ 797
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFSI 568
W P E+ SFLG+ GYYRRF++GFS+
Sbjct: 798 WEQPKTVTEIRSFLGLAGYYRRFVQGFSL 826
Score = 78.2 bits (191), Expect(2) = 3e-56
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA+VFSK+DLRSGYHQL++K++ P
Sbjct: 639 MTIKNKYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVP 683
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 170 bits (431), Expect(2) = 3e-56
Identities = 87/148 (58%), Positives = 109/148 (73%)
Frame = +2
Query: 122 EEDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSK 301
EED+P T FR RY HYEF VMPFGL+NA A FM+LMNRVF YLD+FVIVFID IL YSK
Sbjct: 367 EEDMPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSK 426
Query: 302 NREQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKK 481
+++ H KHL+ VL TL + +L K K +FWLDRV FLG V++ +GI + QK++
Sbjct: 427 SQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEA-VVN 485
Query: 482 WLAPMNTNEMCSFLGIIGYYRRFIKGFS 565
WL P + E+ SFLG+ GYYRRF++GFS
Sbjct: 486 WLRPTSVTEIRSFLGLAGYYRRFVEGFS 513
Score = 74.7 bits (182), Expect(2) = 3e-56
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+T++N+YPLPRI+DLFDQL GA VFSKIDLRSGYHQL+V+++ P
Sbjct: 327 ITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDMP 371
>emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group]
gi|116309615|emb|CAH66670.1| OSIGBa0110B10.7 [Oryza
sativa Indica Group]
Length = 1603
Score = 167 bits (423), Expect(2) = 6e-56
Identities = 87/154 (56%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 888 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 947
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLGLV++ G+++ K++ W
Sbjct: 948 EEEHVEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGLVISFNGVEVDPSKVEA-VLAW 1006
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1007 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1040
Score = 76.6 bits (187), Expect(2) = 6e-56
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 847 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRTEDIP 891
>emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group]
Length = 1523
Score = 167 bits (423), Expect(2) = 6e-56
Identities = 87/154 (56%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 888 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 947
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLGLV++ G+++ K++ W
Sbjct: 948 EEEHVEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGLVISFNGVEVDPSKVEA-VLAW 1006
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1007 NPPKNVSEIRSFLGLTGYYRRFIEGFSKLARPMT 1040
Score = 76.6 bits (187), Expect(2) = 6e-56
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 847 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRTEDIP 891
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 170 bits (430), Expect(2) = 6e-56
Identities = 85/147 (57%), Positives = 110/147 (74%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T FR RY HYEF VM FGL+NA A FM+LMNRVF PYLD+FV+VFID IL YSK+
Sbjct: 649 EDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKS 708
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
RE+HE+HL VL+ L + +L K K EFWL+ V FLG VV+ +GI++ +K++ +KW
Sbjct: 709 REEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEA-VEKW 767
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS 565
P + +E+ SF+G+ GYYRRF+K FS
Sbjct: 768 PRPTSVSEIRSFVGLAGYYRRFVKDFS 794
Score = 73.9 bits (180), Expect(2) = 6e-56
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+T+KNKYPLPRI+DLFDQL GA FSKIDLRSGYHQL+++ + P
Sbjct: 608 VTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIP 652
>gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]
Length = 1052
Score = 169 bits (429), Expect(2) = 8e-56
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T FR RY HYEF VM FGL+NA A FM+LMNRVF PYLD+FV+VFID IL YSK+
Sbjct: 607 EDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKS 666
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
RE+HE+HL VL+ L + +L K K EFWL+ V FLG VV+ +GI++ +K++ +KW
Sbjct: 667 REEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEA-VEKW 725
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS 565
P + E+ SF+G+ GYYRRF+K FS
Sbjct: 726 PRPTSVTEIRSFVGLAGYYRRFVKDFS 752
Score = 73.9 bits (180), Expect(2) = 8e-56
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+T+KNKYPLPRI+DLFDQL GA FSKIDLRSGYHQL+++ + P
Sbjct: 566 VTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIP 610
>gb|ABF97102.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 2985
Score = 170 bits (431), Expect(2) = 1e-55
Identities = 88/154 (57%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F +RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 2339 EDIPKTAFSMRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 2398
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K KYEFWLDRV FLG V++ G+K+ K++ W
Sbjct: 2399 EEEHAEHLRLIMEKLRDHQLFAKFSKYEFWLDRVAFLGHVISSNGVKVDPSKVEA-VLAW 2457
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 2458 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 2491
Score = 72.4 bits (176), Expect(2) = 1e-55
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 9 IKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+KNKYPLPRI+DLF+QL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 2300 VKNKYPLPRIDDLFNQLKGARVFSKIDLRSGYHQLKIRSEDIP 2342
>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 166 bits (419), Expect(2) = 1e-55
Identities = 86/154 (55%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFI+ IL YSKN
Sbjct: 936 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFINDILIYSKN 995
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K KYEFWLDRV FLG V++ G+++ K++ W
Sbjct: 996 EEEHAEHLRLIMEKLRDHQLFAKFSKYEFWLDRVAFLGHVISPNGVEVDPSKVEA-VLAW 1054
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1055 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1088
Score = 77.0 bits (188), Expect(2) = 1e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 895 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 939
>gb|AAK92672.1|AC090714_5 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 170 bits (431), Expect(2) = 1e-55
Identities = 88/154 (57%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F +RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 656 EDIPKTAFSMRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 715
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K KYEFWLDRV FLG V++ G+K+ K++ W
Sbjct: 716 EEEHAEHLRLIMEKLRDHQLFAKFSKYEFWLDRVAFLGHVISSNGVKVDPSKVEA-VLAW 774
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 775 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 808
Score = 72.4 bits (176), Expect(2) = 1e-55
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 9 IKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+KNKYPLPRI+DLF+QL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 617 VKNKYPLPRIDDLFNQLKGARVFSKIDLRSGYHQLKIRSEDIP 659
>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 624
Score = 167 bits (422), Expect(2) = 1e-55
Identities = 86/153 (56%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Frame = +2
Query: 128 DIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKNR 307
D+P T FR RY HYEF VM FGL+NA A FM+LMN +F PYLD FVIVFID IL YSK++
Sbjct: 145 DVPKTAFRTRYGHYEFVVMSFGLTNAPAAFMSLMNGIFKPYLDLFVIVFIDDILIYSKSK 204
Query: 308 EQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKWL 487
E+HE+HL VLE L ++KL K K EFWLD V FLG VV+ G+ + K++ K W+
Sbjct: 205 EEHEEHLRMVLEMLREKKLYAKFSKCEFWLDTVSFLGHVVSKDGVMVDPSKIET-VKNWV 263
Query: 488 APMNTNEMCSFLGIIGYYRRFIKGF-SIADSMT 583
P N +E+ SF+G+ YYR+F+KGF SIA +T
Sbjct: 264 RPTNVSEIRSFVGLASYYRQFVKGFSSIASQLT 296
Score = 75.9 bits (185), Expect(2) = 1e-55
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ P
Sbjct: 103 VTIKNKYPLPRIDDLFDQLQGACVFSKIDLRSGYHQLKIRATDVP 147
>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1480
Score = 168 bits (426), Expect(2) = 2e-55
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T FR RY HYEF VM FGL+NA A FM+LMNRVF PYLD+FV+VFID IL YSK+
Sbjct: 746 EDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKS 805
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
RE+HE+HL VL+ L + +L K K EFWL+RV FLG VV+ +GI++ +K++ +KW
Sbjct: 806 REEHEQHLKIVLQILREHRLYAKFSKCEFWLERVAFLGHVVSREGIQVDTKKIEA-VEKW 864
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS 565
+ E+ SF+G+ GYYRRF+K FS
Sbjct: 865 PRSTSVTEIRSFVGLAGYYRRFVKDFS 891
Score = 73.9 bits (180), Expect(2) = 2e-55
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+T+KNKYPLPRI+DLFDQL GA FSKIDLRSGYHQL+++ + P
Sbjct: 705 VTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIP 749
>gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 165 bits (417), Expect(2) = 2e-55
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 945 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILVYSKN 1004
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLG V++ G+++ K++ W
Sbjct: 1005 EEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEA-VLAW 1063
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1064 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1097
Score = 77.0 bits (188), Expect(2) = 2e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 904 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 948
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 164 bits (416), Expect(2) = 3e-55
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 1054 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 1113
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLG V++ G+++ K++ W
Sbjct: 1114 EEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEA-VLAW 1172
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1173 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1206
Score = 77.0 bits (188), Expect(2) = 3e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 1013 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 1057
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 164 bits (416), Expect(2) = 3e-55
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 1028 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 1087
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLG V++ G+++ K++ W
Sbjct: 1088 EEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEA-VLAW 1146
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1147 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1180
Score = 77.0 bits (188), Expect(2) = 3e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 987 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 1031
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 164 bits (416), Expect(2) = 3e-55
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 1028 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 1087
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLG V++ G+++ K++ W
Sbjct: 1088 EEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEA-VLAW 1146
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1147 NPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1180
Score = 77.0 bits (188), Expect(2) = 3e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 987 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 1031
>emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 164 bits (416), Expect(2) = 3e-55
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Frame = +2
Query: 125 EDIPMTTFRIRYVHYEFTVMPFGLSNALAIFMNLMNRVFYPYLDQFVIVFIDAILGYSKN 304
EDIP T F RY YEFTVM FGL+NA A FMNLMN++F YLDQFV+VFID IL YSKN
Sbjct: 1028 EDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKN 1087
Query: 305 REQHEKHLDRVLETLCQEKLDVKSKKYEFWLDRVVFLGLVVTMKGIKLTRQKLKM*KKKW 484
E+H +HL ++E L +L K K EFWLDRV FLG V++ G+++ K++ W
Sbjct: 1088 EEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEA-VLAW 1146
Query: 485 LAPMNTNEMCSFLGIIGYYRRFIKGFS-IADSMT 583
P N +E+ SFLG+ GYYRRFI+GFS +A MT
Sbjct: 1147 NPPTNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 1180
Score = 77.0 bits (188), Expect(2) = 3e-55
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 LTIKNKYPLPRIEDLFDQLNGASVFSKIDLRSGYHQLKVKKKIYP 137
+TIKNKYPLPRI+DLFDQL GA VFSKIDLRSGYHQLK++ + P
Sbjct: 987 VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIP 1031