BLASTX nr result

ID: Rehmannia23_contig00019535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00019535
         (390 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230974.1| PREDICTED: snakin-2-like [Solanum lycopersic...    99   8e-19
gb|ACC91329.1| antimicrobial peptide snakin [Capsicum annuum] gi...    97   2e-18
emb|CAC44011.1| snakin2 [Solanum tuberosum]                            96   5e-18
ref|NP_001275092.1| snakin-2 precursor [Solanum tuberosum] gi|75...    96   5e-18
gb|AFQ40007.1| snakin-2 [Solanum chacoense] gi|402240225|gb|AFQ4...    96   5e-18
gb|AFQ40005.1| snakin-2 [Solanum bulbocastanum]                        96   5e-18
gb|AFQ40004.1| snakin-2 [Solanum palustre]                             96   5e-18
gb|AGC92009.1| snakin [Persea americana var. drymifolia]               94   1e-17
ref|XP_006473655.1| PREDICTED: snakin-2-like [Citrus sinensis]         94   2e-17
ref|XP_003603759.1| Gibberellin-regulated protein [Medicago trun...    94   2e-17
ref|XP_004152651.1| PREDICTED: snakin-2-like [Cucumis sativus] g...    93   3e-17
ref|XP_004136382.1| PREDICTED: snakin-2-like [Cucumis sativus] g...    93   3e-17
ref|XP_006473657.1| PREDICTED: gibberellin-regulated protein 1-l...    93   4e-17
ref|XP_006435178.1| hypothetical protein CICLE_v10002984mg [Citr...    93   4e-17
gb|EXC00984.1| hypothetical protein L484_016050 [Morus notabilis]      92   5e-17
gb|AFK46105.1| unknown [Lotus japonicus]                               92   5e-17
emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]                  92   7e-17
gb|ESW08083.1| hypothetical protein PHAVU_009G016800g [Phaseolus...    92   7e-17
ref|XP_003527650.1| PREDICTED: gibberellin-regulated protein 1-l...    92   7e-17
gb|ABK22904.1| unknown [Picea sitchensis]                              92   9e-17

>ref|XP_004230974.1| PREDICTED: snakin-2-like [Solanum lycopersicum]
           gi|313105492|gb|ADR32106.1| snakin-2 precursor [Solanum
           lycopersicum] gi|402240191|gb|AFQ40006.1| snakin-2
           [Solanum lycopersicum] gi|402240223|gb|AFQ40022.1|
           snakin-2 [Solanum nigrum]
          Length = 104

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 38/45 (84%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLCHRACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCHRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104


>gb|ACC91329.1| antimicrobial peptide snakin [Capsicum annuum]
           gi|221158268|gb|ACM07330.1| snakin [Capsicum annuum]
          Length = 104

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 39/45 (86%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC RACGTCCARCNCVPPGTSGN   CPCYA MTTHGNR KCP
Sbjct: 60  PRLCKRACGTCCARCNCVPPGTSGNTQTCPCYANMTTHGNRRKCP 104


>emb|CAC44011.1| snakin2 [Solanum tuberosum]
          Length = 104

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104


>ref|NP_001275092.1| snakin-2 precursor [Solanum tuberosum]
           gi|75249332|sp|Q93X17.1|SNAK2_SOLTU RecName:
           Full=Snakin-2; Flags: Precursor
           gi|14625945|emb|CAC44012.1| snakin2 [Solanum tuberosum]
           gi|308535464|gb|ACF74550.2| snakin-2 [Solanum tuberosum]
           gi|308535465|gb|ACF74551.2| snakin-2 [Solanum tuberosum]
           gi|308535466|gb|ACF74552.2| snakin-2 [Solanum tuberosum]
           gi|332715320|gb|AEE98996.1| snakin-2 [Solanum tuberosum]
           gi|402240213|gb|AFQ40017.1| snakin-2 [Capsicum annuum]
           gi|402240215|gb|AFQ40018.1| snakin-2 [Solanum nigrum]
           gi|402240217|gb|AFQ40019.1| snakin-2 [Petunia x hybrida]
           gi|402240219|gb|AFQ40020.1| snakin-2 [Nicotiana tabacum]
           gi|402240221|gb|AFQ40021.1| snakin-2 [Solanum chacoense]
          Length = 104

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104


>gb|AFQ40007.1| snakin-2 [Solanum chacoense] gi|402240225|gb|AFQ40023.1| snakin-2
           [Solanum nigrum]
          Length = 104

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104


>gb|AFQ40005.1| snakin-2 [Solanum bulbocastanum]
          Length = 104

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCNRACGTCCARCNCVPPGTSGNTQTCPCYANLTTHGNKRKCP 104


>gb|AFQ40004.1| snakin-2 [Solanum palustre]
          Length = 104

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCCARCNCVPPGTSGN   CPCYA +TTHGN+ KCP
Sbjct: 60  PRLCNRACGTCCARCNCVPPGTSGNTETCPCYANLTTHGNKRKCP 104


>gb|AGC92009.1| snakin [Persea americana var. drymifolia]
          Length = 105

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC RACGTCCARCNCVP GT+GNL+ CPCYA MTTHGN+ KCP
Sbjct: 61  PRLCKRACGTCCARCNCVPSGTAGNLDECPCYANMTTHGNKRKCP 105


>ref|XP_006473655.1| PREDICTED: snakin-2-like [Citrus sinensis]
          Length = 104

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 37/45 (82%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC RACGTCCARC+CVPPGTSGN + CPCYA MTTHG R KCP
Sbjct: 60  PRLCKRACGTCCARCDCVPPGTSGNYDACPCYANMTTHGGRHKCP 104


>ref|XP_003603759.1| Gibberellin-regulated protein [Medicago truncatula]
           gi|355492807|gb|AES74010.1| Gibberellin-regulated
           protein [Medicago truncatula]
          Length = 103

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LCHRACGTCC+RCNCVPPGTSGN   CPCYA  TTHG R KCP
Sbjct: 59  PHLCHRACGTCCSRCNCVPPGTSGNQEMCPCYANQTTHGGRRKCP 103


>ref|XP_004152651.1| PREDICTED: snakin-2-like [Cucumis sativus]
           gi|449503969|ref|XP_004162241.1| PREDICTED:
           snakin-2-like [Cucumis sativus]
          Length = 61

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 37/45 (82%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           PRLC+RACGTCC RCNCVPPGTSGN + CPCYA MTTHG R KCP
Sbjct: 17  PRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 61


>ref|XP_004136382.1| PREDICTED: snakin-2-like [Cucumis sativus]
           gi|449505754|ref|XP_004162560.1| PREDICTED:
           snakin-2-like [Cucumis sativus]
          Length = 102

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 36/45 (80%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LCHRACGTCCARC+CVPPGTSGN   CPCYA +TTHG R KCP
Sbjct: 58  PNLCHRACGTCCARCSCVPPGTSGNYEACPCYATLTTHGGRRKCP 102


>ref|XP_006473657.1| PREDICTED: gibberellin-regulated protein 1-like [Citrus sinensis]
          Length = 100

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LCHRACGTCCARCNCVPPGT+GN   CPCYA MTTH  R KCP
Sbjct: 56  PNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 100


>ref|XP_006435178.1| hypothetical protein CICLE_v10002984mg [Citrus clementina]
           gi|557537300|gb|ESR48418.1| hypothetical protein
           CICLE_v10002984mg [Citrus clementina]
          Length = 87

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LCHRACGTCCARCNCVPPGT+GN   CPCYA MTTH  R KCP
Sbjct: 43  PNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 87


>gb|EXC00984.1| hypothetical protein L484_016050 [Morus notabilis]
          Length = 99

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P+LC RACGTCCARC+CVPPGTSGN + CPCYA MTTHG R KCP
Sbjct: 55  PKLCKRACGTCCARCDCVPPGTSGNYDACPCYANMTTHGGRRKCP 99


>gb|AFK46105.1| unknown [Lotus japonicus]
          Length = 99

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LC RACGTCC RCNCVPPGTSGN + CPCYA +TTHG +PKCP
Sbjct: 55  PNLCKRACGTCCKRCNCVPPGTSGNHDVCPCYASLTTHGGKPKCP 99


>emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]
          Length = 101

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 36/45 (80%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   PRLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           P LCHRACGTCCARC CVPPGTSGN   CPCY  MTTHG R KCP
Sbjct: 57  PNLCHRACGTCCARCRCVPPGTSGNQKVCPCYYNMTTHGGRRKCP 101


>gb|ESW08083.1| hypothetical protein PHAVU_009G016800g [Phaseolus vulgaris]
          Length = 99

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +3

Query: 6   RLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           R+CHRACGTCC RCNCVPPGTSGN   CPCYA +TTHG R KCP
Sbjct: 56  RMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP 99


>ref|XP_003527650.1| PREDICTED: gibberellin-regulated protein 1-like [Glycine max]
          Length = 100

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +3

Query: 6   RLCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           R+CHRACGTCC RCNCVPPGTSGN   CPCYA +TTHG R KCP
Sbjct: 57  RMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP 100


>gb|ABK22904.1| unknown [Picea sitchensis]
          Length = 109

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +3

Query: 9   LCHRACGTCCARCNCVPPGTSGNLNYCPCYAQMTTHGNRPKCP 137
           +C RACGTCCARCNCVPPGTSGN + CPCYA + THGNRPKCP
Sbjct: 67  MCLRACGTCCARCNCVPPGTSGNQDLCPCYASLKTHGNRPKCP 109


Top