BLASTX nr result
ID: Rehmannia23_contig00019029
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00019029
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 144 1e-32
ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, I... 143 2e-32
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5... 143 2e-32
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 142 6e-32
ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, I... 141 8e-32
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe... 141 1e-31
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g... 141 1e-31
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 141 1e-31
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g... 141 1e-31
ref|NP_001149707.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 140 2e-31
ref|XP_001769186.1| predicted protein [Physcomitrella patens] gi... 140 2e-31
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 140 2e-31
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 140 2e-31
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 140 2e-31
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun... 140 2e-31
ref|NP_001152395.1| LOC100286035 [Zea mays] gi|195655855|gb|ACG4... 140 2e-31
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 140 2e-31
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 140 2e-31
gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea] 139 3e-31
gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subun... 139 3e-31
>ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|224030055|gb|ACN34103.1| unknown [Zea mays]
gi|413916302|gb|AFW56234.1| LOW QUALITY PROTEIN:
DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 242
Score = 144 bits (363), Expect = 1e-32
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3
Query: 349 KLKRRLETVKQ*GKGLRNPSKAKMIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDA 170
KL RL + + AKMIIPVRCFTCGKVIGNKWD+YLDLLQADYSEGDALDA
Sbjct: 149 KLDERLHLPLRYSSNDTAAAAAKMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDA 208
Query: 169 LSLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 74
L L RYCCRRMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 209 LELFRYCCRRMLMTHVDLIEKLLNYNTLEKTE 240
>ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like isoform 2 [Solanum lycopersicum]
gi|565372203|ref|XP_006352686.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5-like
[Solanum tuberosum]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL+LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDEYLDLLQADYAEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSEG 71
NYNTLEKSEG
Sbjct: 61 NYNTLEKSEG 70
>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
gi|566176261|ref|XP_006381558.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSEG 71
NYNTLEKSEG
Sbjct: 61 NYNTLEKSEG 70
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 142 bits (357), Expect = 6e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = -3
Query: 283 KMIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKL 104
+MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKL
Sbjct: 42 RMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 101
Query: 103 LNYNTLEKSE 74
LNYNTLEKSE
Sbjct: 102 LNYNTLEKSE 111
>ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Setaria italica]
Length = 74
Score = 141 bits (356), Expect = 8e-32
Identities = 65/69 (94%), Positives = 69/69 (100%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADY+EGDALDAL+LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEKSE
Sbjct: 61 NYNTLEKSE 69
>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
(abc10) [Oryza sativa Japonica Group]
gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
Os11g0194800 [Oryza sativa Japonica Group]
gi|215766304|dbj|BAG98532.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 74
Score = 141 bits (355), Expect = 1e-31
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEKSE
Sbjct: 61 NYNTLEKSE 69
>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
Japonica Group]
Length = 72
Score = 141 bits (355), Expect = 1e-31
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>ref|NP_001149707.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|242082992|ref|XP_002441921.1| hypothetical protein
SORBIDRAFT_08g004910 [Sorghum bicolor]
gi|194696346|gb|ACF82257.1| unknown [Zea mays]
gi|195616462|gb|ACG30061.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195617954|gb|ACG30807.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195627516|gb|ACG35588.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195629628|gb|ACG36455.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|241942614|gb|EES15759.1| hypothetical protein
SORBIDRAFT_08g004910 [Sorghum bicolor]
gi|413916300|gb|AFW56232.1| DNA-directed RNA polymerase
II polypeptide [Zea mays] gi|413916301|gb|AFW56233.1|
DNA-directed RNA polymerase II polypeptide [Zea mays]
gi|413951725|gb|AFW84374.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 71
Score = 140 bits (353), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADYSEGDALDAL L RYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>ref|XP_001769186.1| predicted protein [Physcomitrella patens]
gi|162679612|gb|EDQ66058.1| predicted protein
[Physcomitrella patens]
Length = 73
Score = 140 bits (353), Expect = 2e-31
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDAL+LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLE++E
Sbjct: 61 NYNTLERNE 69
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 140 bits (352), Expect = 2e-31
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK++
Sbjct: 61 NYNTLEKTD 69
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKNE 69
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEKS+
Sbjct: 61 NYNTLEKSD 69
>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
isoform X1 [Glycine max]
gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X2
[Glycine max] gi|571449919|ref|XP_006578280.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein-like isoform X3 [Glycine max]
gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X4
[Glycine max]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTL+KS+
Sbjct: 61 NYNTLDKSD 69
>ref|NP_001152395.1| LOC100286035 [Zea mays] gi|195655855|gb|ACG47395.1| DNA-directed
RNA polymerase II 8.2 kDa polypeptide [Zea mays]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD+YLDLLQADYSEGDALDAL L RYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDVYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLE+SE
Sbjct: 61 NYNTLERSE 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 140 bits (352), Expect = 2e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea]
Length = 71
Score = 139 bits (351), Expect = 3e-31
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIG+KWD YLDLLQADY+EGDALDALSLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGDKWDTYLDLLQADYTEGDALDALSLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEKS+
Sbjct: 61 NYNTLEKSD 69
>gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Triticum urartu]
Length = 71
Score = 139 bits (351), Expect = 3e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 280 MIIPVRCFTCGKVIGNKWDMYLDLLQADYSEGDALDALSLVRYCCRRMLMTHVDLIEKLL 101
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 100 NYNTLEKSE 74
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69