BLASTX nr result
ID: Rehmannia23_contig00018339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018339
(481 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS59971.1| hypothetical protein M569_14833, partial [Genlise... 73 3e-11
ref|XP_004229247.1| PREDICTED: putative E3 ubiquitin-protein lig... 62 6e-08
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|5... 59 9e-07
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 58 1e-06
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 58 1e-06
ref|XP_006597728.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 3e-06
ref|XP_006597729.1| PREDICTED: putative E3 ubiquitin-protein lig... 56 4e-06
ref|XP_006489062.1| PREDICTED: putative E3 ubiquitin-protein lig... 55 7e-06
ref|XP_006489061.1| PREDICTED: putative E3 ubiquitin-protein lig... 55 7e-06
ref|XP_006489060.1| PREDICTED: putative E3 ubiquitin-protein lig... 55 7e-06
ref|XP_006419552.1| hypothetical protein CICLE_v10004156mg [Citr... 55 7e-06
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 55 7e-06
ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein lig... 55 1e-05
>gb|EPS59971.1| hypothetical protein M569_14833, partial [Genlisea aurea]
Length = 792
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLLXXXXXXXXXXXXXXX----RWMA 170
FLQ+VL+ PR++ ++FAPGI + LFPLFI + EK +W+A
Sbjct: 141 FLQSVLVFPRLVYSKFAPGICRSLFPLFIGHEDEKSSSGESLIVKAVLSDDCDEVLKWIA 200
Query: 171 KRYKPWLMYYQIMSTGDFRQG 233
KR+KPWLMYYQIM+TGD G
Sbjct: 201 KRFKPWLMYYQIMATGDSSLG 221
>ref|XP_004229247.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
lycopersicum]
Length = 1326
Score = 62.4 bits (150), Expect = 6e-08
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLLXXXXXXXXXXXXXXXRWMAKRYK 182
FLQA+ +SPR++ TE A + ++L L I + MA+RYK
Sbjct: 156 FLQALAVSPRLLHTEIATELCRQLSVLCIEKE-------PYSKDENEVYAMMVKMARRYK 208
Query: 183 PWLMYYQIMSTGD---FRQGNQVSLADDQSHCTMKRVQRSRSIESQNSHQNLE------- 332
WLMYYQIMS+G+ R G S+ Q ++SRS S +S +N
Sbjct: 209 AWLMYYQIMSSGEDGSLRNGESSSVTSTQHELQQIMSKKSRSTRSSDSCKNENTQCSSSN 268
Query: 333 -EMQHPNSQENITNDVSEESVNISTSMLESHKKIVAYSEKSCIREATRS 476
E HP + +N + EE+ I TS + +K VA +E S + E ++
Sbjct: 269 FEKVHPFNAKNDAKNEKEET--IITSNECTKEKQVAITELSGVAEIPKN 315
>ref|XP_002328632.1| predicted protein [Populus trichocarpa]
gi|566185338|ref|XP_006380148.1| transducin family
protein [Populus trichocarpa]
gi|550333669|gb|ERP57945.1| transducin family protein
[Populus trichocarpa]
Length = 1305
Score = 58.5 bits (140), Expect = 9e-07
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 37/180 (20%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLLXXXXXXXXXXXXXXXRWMAKRYK 182
+LQA+L+SPR++ TEFAP + LFPL + ++E R +A+RYK
Sbjct: 150 YLQAMLVSPRLVRTEFAPEFCRVLFPLSNKSEIED--ESSWDFGEDNTDEAIRQIARRYK 207
Query: 183 PWLMYYQIM----STGDFRQGNQVS---LADDQSHCTMKRVQRSRSIES----QNSHQNL 329
WLMY QIM ++G R N S + D SH S S++ N H+ L
Sbjct: 208 HWLMYCQIMLHGETSGHCRSRNTSSPDKESQDLSHVMKSSSDLSNSVKQGHCLHNYHKKL 267
Query: 330 EEMQ--HP----------NSQENITNDVSE--------------ESVNISTSMLESHKKI 431
+ + HP + E ++ND+ E VNI + LE K I
Sbjct: 268 MQYEKVHPLDLQGNRIEGTANEPMSNDIQEFQYYSNALKHLDQVPKVNIQNANLEKCKSI 327
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 58.2 bits (139), Expect = 1e-06
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKL------LXXXXXXXXXXXXXXXRW 164
FLQA+++SPR+I TEFAPG+ + LF + + + R
Sbjct: 151 FLQALMVSPRLIQTEFAPGLCENLFLTHSISERQNVGGRSFRSVSLMNSDEGKPGEAIRE 210
Query: 165 MAKRYKPWLMYYQIMSTGDFRQG----NQVSLADDQS-----HCTMKRVQRSRSIESQN- 314
AKRYK WLMYYQ+M G+ Q N + DQS + + S SI N
Sbjct: 211 TAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSMYGKSSSTKSSSSIAHGNT 270
Query: 315 ---SHQNLEEMQHPNSQENITNDVSEES-VNISTSMLESHKKIVAYSEKSCIREATRSS 479
+++N +++ + QE+I + +++ + + ++ ++K + S++ ++ RSS
Sbjct: 271 SLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEIQDYRKALNNSDQVSRQDIKRSS 329
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 58.2 bits (139), Expect = 1e-06
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKL------LXXXXXXXXXXXXXXXRW 164
FLQA+++SPR+I TEFAPG+ + LF + + + R
Sbjct: 151 FLQALMVSPRLIQTEFAPGLCENLFLTHSISERQNVGGRSFRSVSLMNSDEGKPGEAIRE 210
Query: 165 MAKRYKPWLMYYQIMSTGDFRQG----NQVSLADDQS-----HCTMKRVQRSRSIESQN- 314
AKRYK WLMYYQ+M G+ Q N + DQS + + S SI N
Sbjct: 211 TAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSXYGKSSSTKSSSSIAHGNT 270
Query: 315 ---SHQNLEEMQHPNSQENITNDVSEES-VNISTSMLESHKKIVAYSEKSCIREATRSS 479
+++N +++ + QE+I + +++ + + ++ ++K + S++ ++ RSS
Sbjct: 271 SLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEIQDYRKALNNSDQVSRQDIKRSS 329
>ref|XP_006597728.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X1 [Glycine max]
Length = 1304
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFP---LFIRPKVEKLLXXXXXXXXXXXXXXXRWMAK 173
FLQAVL+SP+++ TEFA + + LFP + + + + +A+
Sbjct: 132 FLQAVLVSPKLVWTEFASQLCESLFPQSGITMMQRNSSSRSLESVSSEDEMDEAIKEVAR 191
Query: 174 RYKPWLMYYQIMSTGD--------FRQGNQVSLADDQSHCTMKRVQRSRSIESQNSHQNL 329
+YK WL+YYQ+M G+ +Q + + S + VQ ++S N ++ +
Sbjct: 192 KYKEWLVYYQVMLYGETPWWRSYCSKQSPRSVDVPNTSCVSSTSVQHEPRLKSCNMYEKV 251
Query: 330 EEMQHPNSQENITNDVSEESVN-ISTSMLESHKK 428
HP +N+T+ + ES + + E HKK
Sbjct: 252 ----HPLDSQNVTHTMEHESKQFMDIAEYEGHKK 281
>ref|XP_006597729.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X2 [Glycine max]
Length = 1302
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFP---LFIRPKVEKLLXXXXXXXXXXXXXXXRWMAK 173
FLQAVL+SP+++ TEFA + + LFP + + + + +A+
Sbjct: 132 FLQAVLVSPKLVWTEFASQLCESLFPQSGITMMQRNSSSRSLESVSSEDEMDEAIKEVAR 191
Query: 174 RYKPWLMYYQIMSTGDFRQGNQVSLADDQSHCTMKRVQRSRSI--ESQNSHQNLEEMQHP 347
+YK WL+YYQ+M G+ S S+ E + N+ E HP
Sbjct: 192 KYKEWLVYYQVMLYGETPWWRSYCSKQSPRDVPNTSCVSSTSVQHEPRLKSCNMYEKVHP 251
Query: 348 NSQENITNDVSEESVN-ISTSMLESHKK 428
+N+T+ + ES + + E HKK
Sbjct: 252 LDSQNVTHTMEHESKQFMDIAEYEGHKK 279
>ref|XP_006489062.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X3 [Citrus sinensis]
Length = 1349
Score = 55.5 bits (132), Expect = 7e-06
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLL-XXXXXXXXXXXXXXXRWMAKRY 179
FLQA+ + PR+I TEFAP + + LFP PK++ + R +A+RY
Sbjct: 154 FLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSGRKILESDETNGSDAMRLIARRY 213
Query: 180 KPWLMYYQIMSTGDFRQGN----QVSL----ADDQSHCTMKRVQRSRSIE------SQNS 317
K WLMYYQ++ + Q + +VS A +H R + S SIE + ++
Sbjct: 214 KHWLMYYQVLLHEETPQRHCGYREVSSSGVEAQFHTHEIRGRSESSSSIEHVPKLQTSSN 273
Query: 318 HQNLEEMQHP-NSQENITNDVS 380
L HP + QE++TND +
Sbjct: 274 KLMLYAKVHPLDPQEDVTNDTT 295
>ref|XP_006489061.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X2 [Citrus sinensis]
Length = 1351
Score = 55.5 bits (132), Expect = 7e-06
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLL-XXXXXXXXXXXXXXXRWMAKRY 179
FLQA+ + PR+I TEFAP + + LFP PK++ + R +A+RY
Sbjct: 154 FLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSGRKILESDETNGSDAMRLIARRY 213
Query: 180 KPWLMYYQIMSTGDFRQGN----QVSL----ADDQSHCTMKRVQRSRSIE------SQNS 317
K WLMYYQ++ + Q + +VS A +H R + S SIE + ++
Sbjct: 214 KHWLMYYQVLLHEETPQRHCGYREVSSSGVEAQFHTHEIRGRSESSSSIEHVPKLQTSSN 273
Query: 318 HQNLEEMQHP-NSQENITNDVS 380
L HP + QE++TND +
Sbjct: 274 KLMLYAKVHPLDPQEDVTNDTT 295
>ref|XP_006489060.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X1 [Citrus sinensis]
Length = 1351
Score = 55.5 bits (132), Expect = 7e-06
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLL-XXXXXXXXXXXXXXXRWMAKRY 179
FLQA+ + PR+I TEFAP + + LFP PK++ + R +A+RY
Sbjct: 154 FLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSGRKILESDETNGSDAMRLIARRY 213
Query: 180 KPWLMYYQIMSTGDFRQGN----QVSL----ADDQSHCTMKRVQRSRSIE------SQNS 317
K WLMYYQ++ + Q + +VS A +H R + S SIE + ++
Sbjct: 214 KHWLMYYQVLLHEETPQRHCGYREVSSSGVEAQFHTHEIRGRSESSSSIEHVPKLQTSSN 273
Query: 318 HQNLEEMQHP-NSQENITNDVS 380
L HP + QE++TND +
Sbjct: 274 KLMLYAKVHPLDPQEDVTNDTT 295
>ref|XP_006419552.1| hypothetical protein CICLE_v10004156mg [Citrus clementina]
gi|557521425|gb|ESR32792.1| hypothetical protein
CICLE_v10004156mg [Citrus clementina]
Length = 1349
Score = 55.5 bits (132), Expect = 7e-06
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLL-XXXXXXXXXXXXXXXRWMAKRY 179
FLQA+ + PR+I TEFAP + + LFP PK++ + R +A+RY
Sbjct: 154 FLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSGRKILESDETNGSDAMRLIARRY 213
Query: 180 KPWLMYYQIMSTGDFRQGN----QVSL----ADDQSHCTMKRVQRSRSIE------SQNS 317
K WLMYYQ++ + Q + +VS A +H R + S SIE + ++
Sbjct: 214 KHWLMYYQVLLHEETPQRHCGYREVSSSGVEAQFHTHEIRGRSESSSSIEHVPKLQTSSN 273
Query: 318 HQNLEEMQHP-NSQENITNDVS 380
L HP + QE++TND +
Sbjct: 274 KLMLYAKVHPLDPQEDVTNDTT 295
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLLXXXXXXXXXXXXXXXRWMAKRYK 182
FLQA+++SPR+I TEFAPG+ + LF + + + R AKRYK
Sbjct: 151 FLQALMVSPRLIQTEFAPGLCENLFLTHSISERQNV--------------AIRETAKRYK 196
Query: 183 PWLMYYQIMSTGDFRQ 230
WLMYYQ+M G+ Q
Sbjct: 197 SWLMYYQVMQYGETPQ 212
>ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like
[Fragaria vesca subsp. vesca]
Length = 1331
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +3
Query: 3 FLQAVLISPRIICTEFAPGIFQRLFPLFIRPKVEKLLXXXXXXXXXXXXXXXRWMAKRYK 182
FLQAVL+SPR++ TEFA +++ +FP P+ +++ + MA+ Y+
Sbjct: 161 FLQAVLVSPRLVQTEFAHDLYESVFPTCAGPERQEIRESKSLESIDKDEATMQ-MARIYR 219
Query: 183 PWLMYYQIMSTGDFRQG 233
WLMYY++M G+ QG
Sbjct: 220 DWLMYYKVMLYGETPQG 236