BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00017490
         (537 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ...   187   2e-45
ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III ...   186   4e-45
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu...   185   5e-45
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   185   5e-45
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei...   185   5e-45
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun...   185   7e-45
gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   184   9e-45
ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, I...   184   1e-44
gb|ACJ84175.1| unknown [Medicago truncatula]                          184   1e-44
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   184   1e-44
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I...   184   1e-44
emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera]   184   1e-44
gb|AFK33543.1| unknown [Lotus japonicus]                              183   2e-44
ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II a...   183   3e-44
ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, I...   183   3e-44
gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus...   182   3e-44
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   182   3e-44
ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I...   182   4e-44
ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [A...   181   7e-44
gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus...   181   1e-43

>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Glycine max]
          Length = 142

 Score =  187 bits (474), Expect = 2e-45
 Identities = 91/91 (100%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 52  PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 111

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 112 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Medicago truncatula] gi|124360124|gb|ABN08140.1|
           DNA-directed RNA polymerase, 14 to 18 kDa subunit
           [Medicago truncatula] gi|355500206|gb|AES81409.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Medicago truncatula] gi|388508874|gb|AFK42503.1|
           unknown [Medicago truncatula]
           gi|388517849|gb|AFK46986.1| unknown [Medicago
           truncatula]
          Length = 145

 Score =  186 bits (471), Expect = 4e-45
 Identities = 90/91 (98%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPR+TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 55  PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 114

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 115 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145


>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
           gi|550327061|gb|EEE96460.2| hypothetical protein
           POPTR_0012s13610g [Populus trichocarpa]
          Length = 183

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/91 (98%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 93  PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 152

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 153 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 183


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/91 (98%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PV+RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 52  PVKRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 111

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 112 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 143

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/91 (98%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 53  PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 112

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 113 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
           notabilis]
          Length = 143

 Score =  185 bits (469), Expect = 7e-45
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVE PRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 53  PVEHPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 112

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 113 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  184 bits (468), Expect = 9e-45
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 53  PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 112

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 270
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 113 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Cicer arietinum]
          Length = 145

 Score =  184 bits (467), Expect = 1e-44
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           P ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 55  PGERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 114

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 115 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145


>gb|ACJ84175.1| unknown [Medicago truncatula]
          Length = 145

 Score =  184 bits (467), Expect = 1e-44
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPR+TSKYMTKYERARI GTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 55  PVERPRRTSKYMTKYERARIFGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 114

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 115 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  184 bits (467), Expect = 1e-44
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +1

Query: 4   VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 183
           VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI
Sbjct: 53  VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 112

Query: 184 RRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           RRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 113 RRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
           unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  184 bits (466), Expect = 1e-44
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 51  PVERSRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 110

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 111 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 141


>emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera]
          Length = 140

 Score =  184 bits (466), Expect = 1e-44
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 50  PVERSRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 109

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 110 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 140


>gb|AFK33543.1| unknown [Lotus japonicus]
          Length = 144

 Score =  183 bits (465), Expect = 2e-44
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PV+RPRKTSKYMTKYERARILGTRALQISMNAPVMVEL GETDPLEIAMKELRERKIPFT
Sbjct: 54  PVQRPRKTSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLEIAMKELRERKIPFT 113

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 144


>ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Solanum tuberosum]
          Length = 144

 Score =  183 bits (464), Expect = 3e-44
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 54  PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 113

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 270
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 114 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 143


>ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Solanum lycopersicum]
          Length = 144

 Score =  183 bits (464), Expect = 3e-44
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 54  PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 113

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 270
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 114 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 143


>gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus vulgaris]
          Length = 142

 Score =  182 bits (463), Expect = 3e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +1

Query: 7   ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 186
           ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 54  ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 113

Query: 187 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  182 bits (463), Expect = 3e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +1

Query: 7   ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 186
           ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 36  ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 95

Query: 187 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 96  RYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Fragaria vesca subsp. vesca]
          Length = 142

 Score =  182 bits (462), Expect = 4e-44
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 52  PVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 111

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 112 IRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 142


>ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [Amborella trichopoda]
           gi|548861988|gb|ERN19353.1| hypothetical protein
           AMTR_s00069p00112860 [Amborella trichopoda]
          Length = 144

 Score =  181 bits (460), Expect = 7e-44
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = +1

Query: 7   ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 186
           +RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 56  DRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 115

Query: 187 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 273
           RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 116 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 144


>gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus vulgaris]
           gi|561015895|gb|ESW14699.1| hypothetical protein
           PHAVU_007G009900g [Phaseolus vulgaris]
          Length = 141

 Score =  181 bits (459), Expect = 1e-43
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = +1

Query: 1   PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 180
           PVERPRKTSKYMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 52  PVERPRKTSKYMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 111

Query: 181 IRRYLPDGSYEDWGVDELIVEDSWKRQVG 267
           IRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 112 IRRYLPDGSYEDWGVDELIVEDSWKRQVG 140