BLASTX nr result
ID: Rehmannia23_contig00017478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00017478
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY08704.1| Retrotransposon, unclassified-like protein [Theob... 69 5e-10
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 69 6e-10
ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303... 64 2e-08
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 64 3e-08
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 63 5e-08
gb|EEC81552.1| hypothetical protein OsI_24974 [Oryza sativa Indi... 63 5e-08
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 62 6e-08
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 62 6e-08
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 62 6e-08
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 62 8e-08
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 62 8e-08
gb|EMJ27538.1| hypothetical protein PRUPE_ppa022315mg, partial [... 62 8e-08
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 62 8e-08
gb|EMJ07778.1| hypothetical protein PRUPE_ppa020293mg, partial [... 62 8e-08
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 62 8e-08
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6... 62 8e-08
gb|EEC68446.1| hypothetical protein OsI_36656 [Oryza sativa Indi... 62 8e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 62 8e-08
gb|ABA94593.2| retrotransposon protein, putative, unclassified [... 62 8e-08
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 62 1e-07
>gb|EOY08704.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 279
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +2
Query: 44 SSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLAV 223
S+SS+ K+WK IW L +P KI VF W F + LPT++AL R + +D + +C V
Sbjct: 78 SASSNDDAFKVWKKIWNLHIPRKILVFIWRIFHSCLPTRVALAKRKVAIDTICPLCSQTV 137
Query: 224 ETEEHALRDCSWTEFLWESS 283
ET H +C++T +W S+
Sbjct: 138 ETNLHVFWECTFTRAVWLST 157
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 38 DNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGL 217
++SSSS KK+W +W +P K+KVF+W N LPT + + R EL V + CGL
Sbjct: 842 ESSSSSGNDTKKVWNHVWKCNIPQKVKVFSWRAISNCLPTMVNKKKRNPELSDVCSFCGL 901
Query: 218 AVETEEHALRDCSWTEFLWE-SSSL*IILPAQECRGHLADWFKDFMK 355
E HAL C W+ SS + G +DW DF++
Sbjct: 902 EPEDVAHALWRCPHARRYWDLMSSEMQVQRILYGSGEGSDWILDFLE 948
>ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303799 [Fragaria vesca
subsp. vesca]
Length = 351
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +2
Query: 23 HKECADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVG 202
H E +SSSS IWK +W + VP K+++ W +LPTK L+ +G++L V
Sbjct: 75 HMETIASSSSSQGGWGFIWKKVWKVNVPPKVRMHAWRILKEVLPTKWVLKKKGVDLGVEC 134
Query: 203 NICGLAVETEEHALRDCSWTEFLWESSSL---*IILPAQECRGHLAD 334
CG E H ++C LW+ SSL PA E + L D
Sbjct: 135 PFCGGDKEDGLHIFKNCGVVNQLWKCSSLTSTPSTHPAMEIKAWLCD 181
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
+S+S+S++ ++IW IW VP K+K+ W +ILPT LRT+ + +D + +C A
Sbjct: 524 SSASTSSQVEQIWHHIWRSNVPRKVKINAWKACGSILPTVSQLRTKHVYIDALCYLCNSA 583
Query: 221 VETEEHALRDCSW 259
VE EH +RDC +
Sbjct: 584 VEIVEHVVRDCPY 596
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 20 IHKECADNSSSSSTRN-KKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDV 196
I + AD SSSSS +N +KIW IW VP K+KVF W N L + + R +E
Sbjct: 1596 ISLDYADESSSSSGQNPQKIWDLIWKCNVPQKVKVFCWRAANNCLANQENKKKRNLERSE 1655
Query: 197 VGNICGLAVETEEHALRDCSWTEFLWES 280
+ ICG E HAL C LWE+
Sbjct: 1656 ICCICGNETEDVSHALSRCPHAVHLWEA 1683
>gb|EEC81552.1| hypothetical protein OsI_24974 [Oryza sativa Indica Group]
Length = 1015
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 20 IHKECADNSSSSSTRN-KKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDV 196
I + AD SSSSS +N +KIW IW VP K+KVF W N L + + R +E
Sbjct: 854 ISLDYADESSSSSGQNPQKIWDLIWKCNVPQKVKVFCWRAANNCLANQENKKKRNLERSE 913
Query: 197 VGNICGLAVETEEHALRDCSWTEFLWES 280
+ ICG E HAL C LWE+
Sbjct: 914 ICCICGNETEDVSHALSRCPHAVHLWEA 941
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +2
Query: 35 ADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICG 214
A + S+S N K WK +W++E+P K+K+F W N+LPT L R D + C
Sbjct: 1002 APDEPSNSGSNSKRWKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCN 1061
Query: 215 LAVETEEHALRDCSWTEFLW 274
VET HAL DC +W
Sbjct: 1062 REVETVRHALLDCKAARKIW 1081
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +2
Query: 38 DNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGL 217
D +SSS N +WK IW + KI+ F W N +PT L R + +CGL
Sbjct: 592 DRASSSHAVNSDVWKVIWRAHITPKIRNFMWRALTNSIPTCANLFGRKLARSPTCRLCGL 651
Query: 218 AVETEEHALRDCSWTEFLW 274
ET EH L CSWT +W
Sbjct: 652 FPETVEHLLLLCSWTRAVW 670
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +2
Query: 38 DNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGL 217
D +SSS N +WK IW + KI+ F W N +PT L R + +CGL
Sbjct: 904 DRASSSHAVNSDVWKVIWRAHITPKIRNFMWRALTNSIPTCANLFGRKLARSPTCRLCGL 963
Query: 218 AVETEEHALRDCSWTEFLW 274
ET EH L CSWT +W
Sbjct: 964 FPETVEHLLLLCSWTRAVW 982
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/100 (34%), Positives = 52/100 (52%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
N SS + ++WK W L++P K+K+F W NILPT L R + + C L
Sbjct: 1121 NEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQ 1180
Query: 221 VETEEHALRDCSWTEFLWESSSL*IILPAQECRGHLADWF 340
VET H L +C +W+ + L I+ P+++ H D+F
Sbjct: 1181 VETVSHVLIECKAARKIWDLAPL-IVQPSKD---HNQDFF 1216
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/100 (34%), Positives = 52/100 (52%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
N SS + ++WK W L++P K+K+F W NILPT L R + + C L
Sbjct: 434 NEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQ 493
Query: 221 VETEEHALRDCSWTEFLWESSSL*IILPAQECRGHLADWF 340
VET H L +C +W+ + L I+ P+++ H D+F
Sbjct: 494 VETVSHVLIECKAARKIWDLAPL-IVQPSKD---HNQDFF 529
>gb|EMJ27538.1| hypothetical protein PRUPE_ppa022315mg, partial [Prunus persica]
Length = 307
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +2
Query: 20 IHKECADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVV 199
+H SSS+S + W +W VP ++K F W ILPTK L + + LD
Sbjct: 73 LHSSTGRASSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEE 132
Query: 200 GNICGLAVETEEHALRDCSWTEFLWESSSL 289
+C VE+ H LRDC + W SS+L
Sbjct: 133 CMLCEGPVESSIHILRDCPFAICAWRSSTL 162
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/103 (32%), Positives = 51/103 (49%)
Frame = +2
Query: 29 ECADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNI 208
EC++ S S WK IWAL+VP KI++F W C+ N+L + LR R ++++ +
Sbjct: 198 ECSNQSGQSGP-----WKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDVEADCLL 252
Query: 209 CGLAVETEEHALRDCSWTEFLWESSSL*IILPAQECRGHLADW 337
CG +TE H C W +S + + E L+ W
Sbjct: 253 CGNNGKTEVHLFFRCEIARLFWFASPSHLDVHGVEGEDFLSCW 295
>gb|EMJ07778.1| hypothetical protein PRUPE_ppa020293mg, partial [Prunus persica]
Length = 270
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
++ + S+ + K+WK IW ++VP KI+ F W LN + TK L R I +DV C
Sbjct: 194 STGTGSSLSPKLWKHIWKMKVPAKIQHFLWRFALNGISTKAVLFHRKIAMDVTCFCCSTG 253
Query: 221 VETEEHALRDCS 256
ET HALRDCS
Sbjct: 254 CETTIHALRDCS 265
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
+SSSS +K W+ +W VP K+K+FTW N LPT + R +E+ ICG+
Sbjct: 1398 SSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGME 1457
Query: 221 VETEEHALRDCSWTEFLW 274
E HAL C + LW
Sbjct: 1458 KEDTMHALCRCPQAKHLW 1475
>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
III subunit RPC6 [Medicago truncatula]
Length = 456
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 71 KIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLAVETEEHALRD 250
K+WK IW L +P +++ F W NI+PT+ LR RG+ LD V +C A E+ H
Sbjct: 258 KLWKLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMA 317
Query: 251 CSWTEFLWESSSL*IILPAQ-ECRGHLADW 337
C T +W +S L P Q + L W
Sbjct: 318 CPMTLQVWFASPLGFQPPPQTDLNAWLLSW 347
>gb|EEC68446.1| hypothetical protein OsI_36656 [Oryza sativa Indica Group]
Length = 314
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/84 (39%), Positives = 40/84 (47%)
Frame = +2
Query: 29 ECADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNI 208
E D SSS+ K WK IWA VP K+++F W N LPT + R +EL I
Sbjct: 40 ETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPTMKNKKKRNLELLSTCCI 99
Query: 209 CGLAVETEEHALRDCSWTEFLWES 280
CG E HAL C LW +
Sbjct: 100 CGAEEEDVAHALCHCQQARNLWSA 123
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = +2
Query: 41 NSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGLA 220
+SSSS +K W+ +W VP K+K+FTW N LPT + R +E+ ICG+
Sbjct: 1426 SSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGME 1485
Query: 221 VETEEHALRDCSWTEFLW 274
E HAL C + LW
Sbjct: 1486 KEDTMHALCRCPQAKHLW 1503
>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1469
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/84 (39%), Positives = 40/84 (47%)
Frame = +2
Query: 29 ECADNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNI 208
E D SSS+ K WK IWA VP K+++F W N LPT + R +EL I
Sbjct: 1175 ETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPTMKNKKKRNLELLSTCCI 1234
Query: 209 CGLAVETEEHALRDCSWTEFLWES 280
CG E HAL C LW +
Sbjct: 1235 CGAEEEDVAHALCHCQQARNLWSA 1258
>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +2
Query: 38 DNSSSSSTRNKKIWKWIWALEVPIKIKVFTWICFLNILPTKMALRTRGIELDVVGNICGL 217
D SSSS++ +W+ IW VP K+K+F W +ILPTK L +G+++ + CG
Sbjct: 601 DESSSSNSDTSMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGD 660
Query: 218 AVETEEHALRDCSWTEFLWESSSL 289
E+ H L C + W S L
Sbjct: 661 ITESALHVLAMCPFAVATWNISLL 684