BLASTX nr result
ID: Rehmannia23_contig00017415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00017415
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5... 143 2e-32
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe... 141 1e-31
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 140 1e-31
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 140 1e-31
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 140 2e-31
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 139 3e-31
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun... 139 3e-31
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 139 3e-31
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 139 3e-31
ref|XP_001769186.1| predicted protein [Physcomitrella patens] gi... 139 4e-31
ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, I... 139 5e-31
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 139 5e-31
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g... 138 7e-31
ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Gly... 138 7e-31
ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutr... 138 9e-31
ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polyp... 138 9e-31
ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subun... 137 1e-30
gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus... 137 1e-30
ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like pro... 137 1e-30
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g... 137 1e-30
>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
gi|566176261|ref|XP_006381558.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEKSEG+
Sbjct: 64 TLEKSEGS 71
>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 65/68 (95%), Positives = 67/68 (98%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEKSE +
Sbjct: 64 TLEKSENS 71
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 140 bits (354), Expect = 1e-31
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 46 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 105
Query: 183 TLEKSE 200
TLEKSE
Sbjct: 106 TLEKSE 111
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 71
Score = 140 bits (354), Expect = 1e-31
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TLEKSE
Sbjct: 64 TLEKSE 69
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 140 bits (352), Expect = 2e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEKS+ +
Sbjct: 64 TLEKSDNS 71
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 139 bits (351), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TLEK+E
Sbjct: 64 TLEKNE 69
>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
isoform X1 [Glycine max]
gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X2
[Glycine max] gi|571449919|ref|XP_006578280.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein-like isoform X3 [Glycine max]
gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X4
[Glycine max]
Length = 71
Score = 139 bits (351), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TL+KS+
Sbjct: 64 TLDKSD 69
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 139 bits (351), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TLE+SE
Sbjct: 64 TLERSE 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 139 bits (351), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TLEK+E
Sbjct: 64 TLEKTE 69
>ref|XP_001769186.1| predicted protein [Physcomitrella patens]
gi|162679612|gb|EDQ66058.1| predicted protein
[Physcomitrella patens]
Length = 73
Score = 139 bits (350), Expect = 4e-31
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDAL LVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLE++E T
Sbjct: 64 TLERNENT 71
>ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like isoform 2 [Solanum lycopersicum]
gi|565372203|ref|XP_006352686.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5-like
[Solanum tuberosum]
Length = 71
Score = 139 bits (349), Expect = 5e-31
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDEYLDLLQADYAEGDALDALNLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEKSEG+
Sbjct: 64 TLEKSEGS 71
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Brachypodium distachyon]
Length = 71
Score = 139 bits (349), Expect = 5e-31
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEK+E T
Sbjct: 64 TLEKTEAT 71
>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
(abc10) [Oryza sativa Japonica Group]
gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
Os11g0194800 [Oryza sativa Japonica Group]
gi|215766304|dbj|BAG98532.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 74
Score = 138 bits (348), Expect = 7e-31
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSEGT 206
TLEK+E T
Sbjct: 64 TLEKTETT 71
>ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Glycine max]
gi|356502404|ref|XP_003520009.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like [Glycine
max] gi|255631340|gb|ACU16037.1| unknown [Glycine max]
Length = 71
Score = 138 bits (348), Expect = 7e-31
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TL+KS+
Sbjct: 64 TLDKSD 69
>ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutrema salsugineum]
gi|557088483|gb|ESQ29263.1| hypothetical protein
EUTSA_v10023792mg [Eutrema salsugineum]
Length = 71
Score = 138 bits (347), Expect = 9e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDA+GLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
T+EKS+
Sbjct: 64 TMEKSD 69
>ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polypeptide family protein
[Populus trichocarpa] gi|550342885|gb|EEE78446.2|
DNA-directed RNA polymerase II 8.2 kDa polypeptide
family protein [Populus trichocarpa]
Length = 74
Score = 138 bits (347), Expect = 9e-31
Identities = 66/71 (92%), Positives = 68/71 (95%), Gaps = 3/71 (4%)
Frame = +3
Query: 3 PVRCFTCG---KVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 173
PVRCFTCG KVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 4 PVRCFTCGNCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 63
Query: 174 NYNTLEKSEGT 206
NYNTLEKSEG+
Sbjct: 64 NYNTLEKSEGS 74
>ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Citrus sinensis]
Length = 71
Score = 137 bits (346), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADY EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TL+KS+
Sbjct: 64 TLDKSD 69
>gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus vulgaris]
Length = 71
Score = 137 bits (346), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
L+KS+
Sbjct: 64 ALDKSD 69
>ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like protein [Arabidopsis
thaliana] gi|297840381|ref|XP_002888072.1| predicted
protein [Arabidopsis lyrata subsp. lyrata]
gi|565487951|ref|XP_006301615.1| hypothetical protein
CARUB_v10022056mg [Capsella rubella]
gi|11134747|sp|Q9SYA6.1|RPBAL_ARATH RecName:
Full=DNA-directed RNA polymerase subunit 10-like
protein; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=DNA-directed
RNA polymerases I, II, and III subunit RPABC5; Short=RNA
polymerases I, II, and III subunit ABC5; AltName:
Full=RPB10 homolog gi|4508082|gb|AAD21426.1| Putative
RNA polymerase II subunit Rpb10 [Arabidopsis thaliana]
gi|297333913|gb|EFH64331.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332195756|gb|AEE33877.1| DNA-directed RNA polymerases
II-like protein of unknown function [Arabidopsis
thaliana] gi|482570325|gb|EOA34513.1| hypothetical
protein CARUB_v10022056mg [Capsella rubella]
Length = 71
Score = 137 bits (345), Expect = 1e-30
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWDTYL+LLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
T+EKS+
Sbjct: 64 TMEKSD 69
>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
Japonica Group]
Length = 72
Score = 137 bits (345), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 3 PVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 182
PVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN
Sbjct: 4 PVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 63
Query: 183 TLEKSE 200
TLEK+E
Sbjct: 64 TLEKTE 69