BLASTX nr result

ID: Rehmannia23_contig00017326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00017326
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS61296.1| hypothetical protein M569_13501 [Genlisea aurea]        84   3e-14
ref|XP_006339701.1| PREDICTED: F-box protein At5g51380-like isof...    63   5e-08
ref|XP_006339700.1| PREDICTED: F-box protein At5g51380-like isof...    63   5e-08
ref|XP_004231218.1| PREDICTED: F-box protein At5g07670-like [Sol...    60   5e-07

>gb|EPS61296.1| hypothetical protein M569_13501 [Genlisea aurea]
          Length = 584

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 51/106 (48%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
 Frame = -3

Query: 309 KQRLSSWSDPFSNG-RFDPNEALKHAILKMRRRRPIXXXXXXXXXXXXXXXXXXSNPNL- 136
           K+R SSWS+ F  G R D NEAL+H ILKMR                         P   
Sbjct: 99  KKRSSSWSEQFHPGDRVDANEALRHVILKMRLHSISNSESSTPHSESEPDSADSFTPTPP 158

Query: 135 FSASADYTSLLSDELLLKVFDKIS-DAKQHLANSLVCRRWCVLCGK 1
               ADY SLLSDELLL V  + S D KQH++NSLVCRRWC+L GK
Sbjct: 159 CDGGADYFSLLSDELLLNVLTRASPDGKQHISNSLVCRRWCILIGK 204


>ref|XP_006339701.1| PREDICTED: F-box protein At5g51380-like isoform X2 [Solanum
           tuberosum]
          Length = 416

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -3

Query: 312 AKQRLSSWSDPFSNGRFDPNEALKHAILKMRRRRPIXXXXXXXXXXXXXXXXXXSNPN-- 139
           AK+R SS SD ++N      +ALK  +L+MR +                      +P   
Sbjct: 19  AKKRRSSLSDIWNN---KDTQALKQLVLQMRAQSVSNSTTPPSEPESDIQSLTLDDPEPT 75

Query: 138 LFSASADYTSLLSDELLLKVFDKISDAKQHLANSLVCRRWCVLCGK 1
            FS+  DYT++LSD+LLL V  K+ + +QH +NSLVC+RWC   GK
Sbjct: 76  RFSSGPDYTAVLSDKLLLSVLSKLPE-QQHTSNSLVCKRWCKFSGK 120


>ref|XP_006339700.1| PREDICTED: F-box protein At5g51380-like isoform X1 [Solanum
           tuberosum]
          Length = 499

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -3

Query: 312 AKQRLSSWSDPFSNGRFDPNEALKHAILKMRRRRPIXXXXXXXXXXXXXXXXXXSNPN-- 139
           AK+R SS SD ++N      +ALK  +L+MR +                      +P   
Sbjct: 19  AKKRRSSLSDIWNN---KDTQALKQLVLQMRAQSVSNSTTPPSEPESDIQSLTLDDPEPT 75

Query: 138 LFSASADYTSLLSDELLLKVFDKISDAKQHLANSLVCRRWCVLCGK 1
            FS+  DYT++LSD+LLL V  K+ + +QH +NSLVC+RWC   GK
Sbjct: 76  RFSSGPDYTAVLSDKLLLSVLSKLPE-QQHTSNSLVCKRWCKFSGK 120


>ref|XP_004231218.1| PREDICTED: F-box protein At5g07670-like [Solanum lycopersicum]
          Length = 621

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -3

Query: 309 KQRLSSWSDPFSNGRFDPNEALKHAILKMRRRRPIXXXXXXXXXXXXXXXXXXSN--PNL 136
           K+R SS SD ++N      +ALK  +L+MR +                      +  P  
Sbjct: 22  KKRRSSLSDIWNN---KDAQALKQLVLQMRAQSVSNSTTPPSEPESDIQSLTQDDGEPTR 78

Query: 135 FSASADYTSLLSDELLLKVFDKISDAKQHLANSLVCRRWCVLCGK 1
           FS+  DYT++LSD+LLL V  K+ +  QH++ SLVC+RWC L GK
Sbjct: 79  FSSGPDYTAVLSDKLLLNVLSKLPE-HQHISYSLVCKRWCKLSGK 122


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