BLASTX nr result
ID: Rehmannia23_contig00017181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00017181
(671 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 100 3e-19
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp... 90 7e-16
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp... 90 7e-16
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i... 89 2e-15
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm... 88 2e-15
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe... 86 1e-14
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat... 86 1e-14
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu... 86 1e-14
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao] 85 2e-14
ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Ar... 85 2e-14
emb|CBI15459.3| unnamed protein product [Vitis vinifera] 85 2e-14
tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea m... 85 2e-14
ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [A... 84 4e-14
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp... 84 4e-14
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i... 84 4e-14
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i... 84 4e-14
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao] 84 5e-14
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp... 84 5e-14
ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [S... 83 7e-14
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 884
Score = 100 bits (250), Expect = 3e-19
Identities = 58/103 (56%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
GVLVSV+RTPKGY IIVYRGKNYQRP A RP+NLLTKRQALARSIELQR EA
Sbjct: 752 GVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDL 811
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDSR-TGDFSDDEDLEIDE 308
+M + N + SR G +S DED+E DE
Sbjct: 812 EERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDEDMEEDE 854
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 100 bits (250), Expect = 3e-19
Identities = 58/103 (56%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
GVLVSV+RTPKGY IIVYRGKNYQRP A RP+NLLTKRQALARSIELQR EA
Sbjct: 749 GVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDL 808
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDSR-TGDFSDDEDLEIDE 308
+M + N + SR G +S DED+E DE
Sbjct: 809 EERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDEDMEEDE 851
>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 820
Score = 89.7 bits (221), Expect = 7e-16
Identities = 52/97 (53%), Positives = 59/97 (60%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
G+LVS+++T +GY II+YRGKNYQRP FRP+NLLTKRQALARSIELQRREA
Sbjct: 713 GLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITAL 772
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDSRTGDFSDDED 293
D ET SR D SDDED
Sbjct: 773 QDKIQNLKSELEDTNMVEEIDEETLFSRL-DASDDED 808
>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum lycopersicum]
Length = 812
Score = 89.7 bits (221), Expect = 7e-16
Identities = 52/97 (53%), Positives = 59/97 (60%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
G+LVS+++T +GY II+YRGKNYQRP FRP+NLLTKRQALARSIELQRREA
Sbjct: 705 GLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITEL 764
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDSRTGDFSDDED 293
D ET SR D SDDED
Sbjct: 765 QDKIQNLKSELEDTEMVEEIDEETLFSRL-DASDDED 800
>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 873
Score = 88.6 bits (218), Expect = 2e-15
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDL 806
Query: 183 XXXXXXXXXXXXDMMSANN-NVAETSDSRTGDFS-DDEDLEIDEWSD 317
+M + +V +TS SR DED+E EW +
Sbjct: 807 QEKIELMKSELEEMKTGKEIDVDKTSYSRLNKAPLFDEDIEEGEWEE 853
>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical
protein [Ricinus communis]
Length = 930
Score = 88.2 bits (217), Expect = 2e-15
Identities = 52/100 (52%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
GVLVS+ERT KGY IIVYRGKNY P RP+NLLTKRQAL RSIELQRREA
Sbjct: 811 GVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKRQALVRSIELQRREALKHHISDL 870
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDSRTGDFS-DDEDLE 299
DM S + SR D S D D+E
Sbjct: 871 QERIELLKLELEDMESGKEIDVDKMSSRLDDSSISDSDVE 910
>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVLVS+++T KGY II+YRGKNYQ PL RPRNLLT+RQALARS+ELQRREA
Sbjct: 777 GVLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSVELQRREA 828
>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 859
Score = 85.5 bits (210), Expect = 1e-14
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVLVS+++T KGY I+VYRGKNYQ PL RP+NLLT+RQALARS+ELQRREA
Sbjct: 732 GVLVSIDKTIKGYAILVYRGKNYQSPLKIRPQNLLTRRQALARSVELQRREA 783
>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
gi|550336383|gb|EEE92740.2| hypothetical protein
POPTR_0006s15340g [Populus trichocarpa]
Length = 977
Score = 85.5 bits (210), Expect = 1e-14
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVLVSV+RT KGY IIVYRGKNY RP A RP NLLT+RQALARS+ELQR EA
Sbjct: 849 GVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQRYEA 900
>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
Length = 876
Score = 85.1 bits (209), Expect = 2e-14
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVLVSV+R KGY IIVYRGK+YQRP RP+NLLTKR+ALARSIELQRREA
Sbjct: 725 GVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRREA 776
>ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM)
domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 85.1 bits (209), Expect = 2e-14
Identities = 51/108 (47%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
GVLVSV++T KGY II+YRGKNYQ P RP NLLT+++A ARSIELQRREA
Sbjct: 716 GVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADL 775
Query: 183 XXXXXXXXXXXXDMMSANNNVAETSDS-----RTGDFSDDEDLEIDEW 311
D M N E ++ DFS DED E EW
Sbjct: 776 EERIELLKTGQDDDMETRNKSDEEEENLYLRVDESDFSSDED-ESLEW 822
>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 85.1 bits (209), Expect = 2e-14
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 182
G+LV++ER PKGY +I YRGKNY+RP++ RPRNLLTK +AL RS+ +QR EA
Sbjct: 693 GILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISEL 752
Query: 183 XXXXXXXXXXXXDMMSAN-------------NNVAETSDSRTGDFSDDEDLEIDEWSD 317
D A + V+E+ D +G SD +D+E +W D
Sbjct: 753 ERTIEQMKMEIGDSKDAEDKDSWSTEGHGQFDQVSESEDEASGMDSDADDVEDIDWKD 810
>tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVL+S+++T KGYVII YRGKNY+RP +PRNLLT+RQALARSIELQRREA
Sbjct: 837 GVLISLDKTTKGYVIIFYRGKNYRRPQIMKPRNLLTRRQALARSIELQRREA 888
>ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [Amborella trichopoda]
gi|548842074|gb|ERN02031.1| hypothetical protein
AMTR_s00045p00114550 [Amborella trichopoda]
Length = 1059
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVL+SV++T KGY II+YRGKNYQRP RP NLLTKR+ALARS+ELQRREA
Sbjct: 954 GVLISVDKTTKGYAIILYRGKNYQRPSMVRPGNLLTKRKALARSVELQRREA 1005
>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Setaria italica]
Length = 963
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVL+SV++T KGY II YRGKNY+RP +PRNLLT+RQALARSIELQRREA
Sbjct: 836 GVLISVDKTTKGYAIIFYRGKNYRRPQIVKPRNLLTRRQALARSIELQRREA 887
>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5
[Theobroma cacao] gi|508783180|gb|EOY30436.1| CRS1 /
YhbY domain-containing protein, putative isoform 5
[Theobroma cacao]
Length = 822
Score = 84.0 bits (206), Expect = 4e-14
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREA 798
>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4
[Theobroma cacao]
Length = 818
Score = 84.0 bits (206), Expect = 4e-14
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREA 798
>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
Length = 856
Score = 83.6 bits (205), Expect = 5e-14
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRRE 155
GVLVSV+R KGY IIVYRGK+YQRP RP+NLLTKR+ALARSIELQRRE
Sbjct: 725 GVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRRE 775
>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 933
Score = 83.6 bits (205), Expect = 5e-14
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRRE 155
G+LVS+++T KGY II+YRGKNYQ PL RPRNLLT+RQALARSIELQRRE
Sbjct: 805 GLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRRE 855
>ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein
SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 3 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 158
GVL+S+++T KGY II YRGKNY+RP +PRNLLT+RQALARSIELQRREA
Sbjct: 833 GVLISLDKTSKGYAIIFYRGKNYRRPQIMKPRNLLTRRQALARSIELQRREA 884