BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00016977
         (1031 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   261   2e-67
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           261   2e-67
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   258   3e-66
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   253   1e-64
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668...   250   7e-64
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   249   1e-63
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   242   2e-61
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659...   239   1e-60
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       239   1e-60
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   234   5e-59
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   233   9e-59
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   224   6e-56
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   224   6e-56
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   221   4e-55
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              219   1e-54
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   219   1e-54
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   219   2e-54
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   219   2e-54
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   215   3e-53
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256...   213   1e-52

>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  261 bits (668), Expect = 2e-67
 Identities = 133/326 (40%), Positives = 203/326 (62%), Gaps = 2/326 (0%)
 Frame = -1

Query: 974  SPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNY 795
            S  NA LE      + +   L+ AE+ F+ Q+++  +    D  T +FH M       N 
Sbjct: 187  SVSNAALELEA---QRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNT 243

Query: 794  ISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQ--SQPTDPAILANGQSLNREEWDGL 621
            I+SL   +G L +S + +    V YYE+L G+     S   +   L      ++++   L
Sbjct: 244  INSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSEL 303

Query: 620  TAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQW 441
                TD+E+ +A K++  +K++GPDG+S +FF+ TW+I+G + LAA+ EFF SGQLLKQW
Sbjct: 304  EKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQW 363

Query: 440  NHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGR 261
            N   + LIPKT++  T+S+FRPISC +  YKVISK+L +RL  +L  +I  +Q+AF+ GR
Sbjct: 364  NATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGR 423

Query: 260  SIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWV 81
            S+ +N+ L  E++ GYNR  ISPR ++K+DLKKAFDSV W+F+   L+ L  P  +I+W+
Sbjct: 424  SLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWI 483

Query: 80   MECVTSTSFSLSVNGGLFGHFQGKKG 3
             +C+T+ SF++SVNG   G F+  KG
Sbjct: 484  HQCITTPSFTISVNGATGGFFRSTKG 509


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  261 bits (668), Expect = 2e-67
 Identities = 133/326 (40%), Positives = 203/326 (62%), Gaps = 2/326 (0%)
 Frame = -1

Query: 974  SPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNY 795
            S  NA LE      + +   L+ AE+ F+ Q+++  +    D  T +FH M       N 
Sbjct: 187  SVSNAALELEA---QRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNT 243

Query: 794  ISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQ--SQPTDPAILANGQSLNREEWDGL 621
            I+SL   +G L +S + +    V YYE+L G+     S   +   L      ++++   L
Sbjct: 244  INSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSEL 303

Query: 620  TAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQW 441
                TD+E+ +A K++  +K++GPDG+S +FF+ TW+I+G + LAA+ EFF SGQLLKQW
Sbjct: 304  EKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQW 363

Query: 440  NHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGR 261
            N   + LIPKT++  T+S+FRPISC +  YKVISK+L +RL  +L  +I  +Q+AF+ GR
Sbjct: 364  NATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGR 423

Query: 260  SIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWV 81
            S+ +N+ L  E++ GYNR  ISPR ++K+DLKKAFDSV W+F+   L+ L  P  +I+W+
Sbjct: 424  SLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWI 483

Query: 80   MECVTSTSFSLSVNGGLFGHFQGKKG 3
             +C+T+ SF++SVNG   G F+  KG
Sbjct: 484  HQCITTPSFTISVNGATGGFFRSTKG 509


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  258 bits (659), Expect = 3e-66
 Identities = 140/347 (40%), Positives = 213/347 (61%), Gaps = 5/347 (1%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R ++A   LK  Q+ L ++P +        + R  A  LA AE+ F  QK++  +L   D
Sbjct: 305  RVVQAAQNLKTCQNNLLAAPSSYLAGLEKEAHRSWAE-LALAEERFLCQKSRVLWLKCGD 363

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTDPA 669
              T FFH M       N I  L  + G    + +++    V+++++LFG+       +  
Sbjct: 364  SNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGI 423

Query: 668  ILANGQSLNREEWDG-----LTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIV 504
               N  SL R + D      L AEV++ ++ S    +  +KS GPDG++S+FFKKTW+IV
Sbjct: 424  SQIN--SLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIV 481

Query: 503  GNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILAT 324
            G   +AAV+EFF SG+LL QWN   V ++PK  +   +++FRPISCC+  YKVISK+LA 
Sbjct: 482  GPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLAR 541

Query: 323  RLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVS 144
            RL ++L   I+ +Q+AFVKGR + +N+ L  EL++G+ +  IS R ++K+DL+KAFDSV 
Sbjct: 542  RLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVG 601

Query: 143  WKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
            W F+ E LK  + PP F++W+ +C+TSTSFS++V+G L G+F+G KG
Sbjct: 602  WGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKG 648


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  253 bits (645), Expect = 1e-64
 Identities = 139/344 (40%), Positives = 201/344 (58%), Gaps = 3/344 (0%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R  +A   L +AQ     +P    +E    +   R   +A+ E+ + +Q +K  +L   D
Sbjct: 727  RTREAYLSLCQAQQSNSQNPSQRAMEIESEAY-VRWDRIASIEEKYLKQVSKLHWLKVGD 785

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYE---QLFGTEHQSQPT 678
            K  K FH  A   A +N I  + +EDGS   + + +  E   +++   QL   +++    
Sbjct: 786  KNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKNETERFFQEFLQLIPNDYEGITV 845

Query: 677  DPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGN 498
            +          +  E D LTA V+ +E+  AL ++ +DKS GPDG++S+F+K+ W I+G 
Sbjct: 846  EKLTSLLPYHCSPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGA 905

Query: 497  DFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRL 318
            +F+ AVK FF  G L K  N  I+ALIPK      + D+RPISCC+V YKVISKI+A RL
Sbjct: 906  EFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRL 965

Query: 317  SSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWK 138
              VL   I   Q+AFVK R +++N+ L  EL++ Y++  IS RC IKID+ KAFDSV W 
Sbjct: 966  KHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWS 1025

Query: 137  FLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKK 6
            FL+ +L  LDFPP F+ WVM CVT+ SFS+ VNG L G+FQ  +
Sbjct: 1026 FLKNVLSALDFPPEFVHWVMLCVTTASFSVQVNGELAGYFQSSR 1069


>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
          Length = 603

 Score =  250 bits (638), Expect = 7e-64
 Identities = 121/276 (43%), Positives = 179/276 (64%)
 Frame = -1

Query: 932 RERATFLATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNS 753
           R +   L   E   + Q  K K+L+ +DKC+KFFHA+ KRN    +I+++  EDG  T+S
Sbjct: 154 RGQTIMLRKTESLKFSQLIKNKYLLQADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSS 213

Query: 752 LEQVGKELVNYYEQLFGTEHQSQPTDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNV 573
            +++    VN++  LF     +Q    +I   G  +  + +  L    + +EV + +  +
Sbjct: 214 QDEIALAFVNHFRNLFSAHELTQTPSISICNRGPKVPIDCFAALLCPTSKQEVWNVISVM 273

Query: 572 EDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPT 393
           +++K+ GPDGF+  FFKK W I+G+D   AV EFF +G++LKQ NHAI+ALIPK      
Sbjct: 274 DNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQ 333

Query: 392 VSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGY 213
           V+ FRPISCC++ YK++SKILA R++ VL  II E Q AF+K + ++DNI L+QE+LR Y
Sbjct: 334 VNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKY 393

Query: 212 NRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDF 105
             K  SPRC++KIDL KA+DS+SW+FL+ MLK + F
Sbjct: 394 AWKRSSPRCLLKIDLHKAYDSISWEFLDWMLKSIGF 429


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  249 bits (636), Expect = 1e-63
 Identities = 126/336 (37%), Positives = 197/336 (58%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1007 ELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSDKCTKFFH 828
            +L++ QSQ +    N  ++    S+       +  E    QQK++  +L   D  +K F 
Sbjct: 306  QLQDLQSQ-DDFDHNDIMQTDAKSIMNDLRHWSHIEDSILQQKSRITWLQQGDTNSKLFF 364

Query: 827  AMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQS-QPTDPAILANGQ 651
               K     N I  L  EDG +    ++V +E++ +Y++L GT   +    D   +  G+
Sbjct: 365  TAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLLGTRASTLMGVDLNTVRGGK 424

Query: 650  SLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEF 471
             L+ +  + L  EV   E+  AL  + +DK+ G DGF++ FFKK+W  +  +  A ++EF
Sbjct: 425  CLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEF 484

Query: 470  FASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPIIN 291
            F + ++ +  N  +V L+PK  H   V +FRPI+CC+V YK+ISK+L  R+  ++G ++N
Sbjct: 485  FNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVN 544

Query: 290  EAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGL 111
            EAQ+ F+ GR I DNI L  EL+RGY RK +SPRCI+K+D++KA+DSV W FLE +L   
Sbjct: 545  EAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEF 604

Query: 110  DFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
             FP  F+ W+MECV++ S+S+ VNG     FQ +KG
Sbjct: 605  GFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKG 640


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  242 bits (618), Expect = 2e-61
 Identities = 121/304 (39%), Positives = 192/304 (63%), Gaps = 1/304 (0%)
 Frame = -1

Query: 911 ATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKE 732
           +T E+  + QK++  ++   D  TKFFHA AK    +N I  L  EDG+  +    + +E
Sbjct: 20  STIEEKIWMQKSRANWIQLGDSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKHNLIKEE 79

Query: 731 LVNYYEQLFGTEHQSQP-TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSA 555
           +  +Y +L G+   S P  D  ++  G  L++ + D L ++ T  EV + L +++  K+ 
Sbjct: 80  IRGFYLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAP 139

Query: 554 GPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRP 375
           G DG++  FFK +W I+G+  + A+ +FF +G + K  N   + L+PK  +  +V +FRP
Sbjct: 140 GIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRP 199

Query: 374 ISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWIS 195
           I+CCSV YK+ISKIL +R+  VL  +++E Q+AFVKGR I DNI L  EL++ Y+RK IS
Sbjct: 200 IACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGIS 259

Query: 194 PRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQ 15
           PRC++KIDL+KA++SV W F++ ++  L F   F++WVM C+T+ S++ ++NG L   F 
Sbjct: 260 PRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFA 319

Query: 14  GKKG 3
            KKG
Sbjct: 320 AKKG 323


>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
          Length = 964

 Score =  239 bits (611), Expect = 1e-60
 Identities = 121/296 (40%), Positives = 181/296 (61%)
 Frame = -1

Query: 1031 SRALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYS 852
            +R   A+ E     + ++ +P +  L A     R +   L  AE   + Q  K K+L+ +
Sbjct: 669  NRVELAEAEYNSVLNSIKQNPQDPSLLALANRTRGQTIMLRKAESMKFAQLIKNKYLLQA 728

Query: 851  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTDP 672
            DKC+KFFHA+ KRN    +I+++  EDG  T+S +++    VN++   F     +Q    
Sbjct: 729  DKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDEIALAFVNHFRNFFSAHELTQTPSI 788

Query: 671  AILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDF 492
            +I   G  +  + +  L    + ++V + +  + ++K+ GPDGF+  FFKK W IVG+D 
Sbjct: 789  SICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGDDI 848

Query: 491  LAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSS 312
             AAV EFF +G++LKQ NHAI+ LIPK      V+ FRPISCC++ YK++SKILA R++ 
Sbjct: 849  FAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRPISCCNLLYKIVSKILANRIAP 908

Query: 311  VLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVS 144
            VL  II E Q AF+K R ++DNI L+QE+LR Y RK  SPRC++KIDL KA+D +S
Sbjct: 909  VLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARKRPSPRCLLKIDLHKAYDFIS 964


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  239 bits (611), Expect = 1e-60
 Identities = 127/329 (38%), Positives = 200/329 (60%), Gaps = 3/329 (0%)
 Frame = -1

Query: 980  ESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKK 801
            + +P NA  E        +   L  AE+ F++QK++  +    D  TK+FH MA      
Sbjct: 325  DPTPINASFELEA---ERKWHILTAAEESFFRQKSRISWFAEGDGNTKYFHRMADARNSS 381

Query: 800  NYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTE---HQSQPTDPAILANGQSLNREEW 630
            N IS+L   +G L +S E +     +Y+  L G E   +  +  D  +L + +    +  
Sbjct: 382  NSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYLMEQNDMNLLLSYRCSPAQVC 441

Query: 629  DGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLL 450
            + L +  ++E++ +AL ++  +KS GPDGF+++FF  +W+IVG +   A+KEFF+SG LL
Sbjct: 442  E-LESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLL 500

Query: 449  KQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFV 270
            KQWN   + LIPK  +    SDFRPISC +  YKVI+++L  RL  +L  +I+ AQ+AF+
Sbjct: 501  KQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFL 560

Query: 269  KGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFI 90
             GRS+ +N+ L  +L+ GYN   ISPR ++K+DLKKAFDSV W+F+   L+ L  P  FI
Sbjct: 561  PGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFI 620

Query: 89   SWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
            +W+ +C+++ +F++S+NGG  G F+  KG
Sbjct: 621  NWISQCISTPTFTVSINGGNGGFFKSTKG 649


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  234 bits (596), Expect = 5e-59
 Identities = 130/346 (37%), Positives = 198/346 (57%), Gaps = 4/346 (1%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSP--GNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVY 855
            R  +A   L  AQS L +SP   NA +EA     + +   LA AE  F+ Q+++  +L  
Sbjct: 204  RTKEAHDALLLAQSVLLASPCPSNAAIEAET---QRKWRILAEAEASFFYQRSRVNWLRE 260

Query: 854  SDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTD 675
             D  + +FH MA      N+I  L+   G      + +    V Y++   G+E      +
Sbjct: 261  GDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHCVEYFQSNLGSEQGLPLFE 320

Query: 674  PAILANGQSL--NREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVG 501
             A ++N  S   +  +   L    + E++ +A  ++  +K++GPDGFS +FF   W I+G
Sbjct: 321  QADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIG 380

Query: 500  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 321
             +   A+ EFF SG+LLKQWN   + LIPK T+  ++SDFRPISC +  YKVISK+L  R
Sbjct: 381  GEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDR 440

Query: 320  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 141
            L   L   I+ +Q+AF+ GR  ++N+ L  EL+ GYN+K I+P  ++K+DL+KAFDSV W
Sbjct: 441  LKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRW 500

Query: 140  KFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
             F+   L+ L+ P  F  W++EC+++ SFS+ +NG   GHF   KG
Sbjct: 501  DFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKG 546


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  233 bits (594), Expect = 9e-59
 Identities = 128/343 (37%), Positives = 189/343 (55%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R L A   L E     E      DL A+L          +T ++   +QK++ ++L   D
Sbjct: 308  RKLAAVQALPEVSQVSELQEEEKDLIAQLRKW-------STIDESILKQKSRIQWLSLGD 360

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEH-QSQPTDP 672
              +KFF    K    +N I  L  + G       ++  E+ N+Y +L GT   Q +  D 
Sbjct: 361  SNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRLLGTSSSQLEAIDL 420

Query: 671  AILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDF 492
             ++  G  L+      L   +T +E+  AL +++D K+ G DGF+S FFKK+W ++  + 
Sbjct: 421  HVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEI 480

Query: 491  LAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSS 312
               + +FF +G + K  N   V LIPK        D+RPI+CCS  YK+ISKIL  RL +
Sbjct: 481  YEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQA 540

Query: 311  VLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFL 132
            V+  +++ AQ  F+  R I DNI L  EL+RGYNR+ +SPRC+IK+D++KA+DSV W FL
Sbjct: 541  VITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFL 600

Query: 131  EEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
            E MLK L FP +FI W+M CV + S+S+ +NG     F  +KG
Sbjct: 601  ESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKG 643


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  224 bits (570), Expect = 6e-56
 Identities = 126/311 (40%), Positives = 175/311 (56%), Gaps = 7/311 (2%)
 Frame = -1

Query: 914  LATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGK 735
            +A  E+ + +QK+K  +    D+ TK FH  A      N I  +   DG +    +++  
Sbjct: 349  VAILEEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKA 408

Query: 734  ELVNYYEQLFGTEHQSQPTD--PAILANGQSL-----NREEWDGLTAEVTDEEVLSALKN 576
            E   ++ +      Q  P D     +   Q L     +  +   L   VT EE+   L  
Sbjct: 409  EAERFFREFL----QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFR 464

Query: 575  VEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEP 396
            +  DKS GPDG++S+FFK TW I+G++F  AV+ FF  G L K  N  I+ALIPK T   
Sbjct: 465  MPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAR 524

Query: 395  TVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRG 216
             + D+RPISCC+V YKVISKI+A RL  VL   I   Q+AFVK R +++N+ L  EL++ 
Sbjct: 525  EMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKD 584

Query: 215  YNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNG 36
            Y++  IS RC IKID+ KAFDSV W FL  +   L FP  FI W+  C+T+ SFS+ VNG
Sbjct: 585  YHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNG 644

Query: 35   GLFGHFQGKKG 3
             L G+FQ  +G
Sbjct: 645  ELAGYFQSSRG 655


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  224 bits (570), Expect = 6e-56
 Identities = 129/348 (37%), Positives = 195/348 (56%), Gaps = 6/348 (1%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R  +A   L E Q+   ++P    +   L +  +  T L+  E+ F +QK+K  ++   D
Sbjct: 609  RTREAHILLCEKQATTLANPSQETIAEELKAYTDW-THLSELEEGFLKQKSKLHWMNVGD 667

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLF----GTEHQSQP 681
                +FH  A+    +N I  +   +     + E++  E   ++ +      G  H    
Sbjct: 668  GNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKGEAERFFNEFLNRQSGDFHGISV 727

Query: 680  TDPAILANGQSLNREEWDG--LTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTI 507
             D   L N  S      D   LT EVT EE+   L  + ++KS GPDG++S+FFK TW++
Sbjct: 728  ED---LRNLMSYRCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSL 784

Query: 506  VGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILA 327
             G DF+AA++ FF  G L K  N  I+ALIPK      + D+RPISCC+V YKVISKILA
Sbjct: 785  TGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILA 844

Query: 326  TRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSV 147
             RL  +L   I + Q+AFVK R +++N+ L  EL++ Y+++ ++PRC +KID+ KAFDSV
Sbjct: 845  NRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSV 904

Query: 146  SWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
             W+FL   L+ L+FP  F  W+  C+++ +FS+ VNG L G F   +G
Sbjct: 905  QWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRG 952


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  221 bits (563), Expect = 4e-55
 Identities = 115/306 (37%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
 Frame = -1

Query: 914  LATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGK 735
            +A  E+ F +Q++K  +L   D+  K FH        +N I  +   DGS+ +  E++  
Sbjct: 237  IAVLEEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKT 296

Query: 734  ELVNYYE---QLFGTEHQSQPTDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDD 564
            E  +++    QL   + +    +          +  + + LT  V+ EE+   + ++ +D
Sbjct: 297  EAEHHFREFLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPND 356

Query: 563  KSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSD 384
            KS GPDG++++F+K  W I+G +F+ A++ FFA G L K  N  I+ALIPK      + D
Sbjct: 357  KSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKD 416

Query: 383  FRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRK 204
            +RPISCC+V YKVISKI+A RL  VL   I   Q+AFVK R +++N+ L  E+++ Y++ 
Sbjct: 417  YRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKD 476

Query: 203  WISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFG 24
             +S RC +KID+ KAFDSV WKFL  +L+ ++FPP F  W+  C+T+ SFS+ VNG L G
Sbjct: 477  SVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAG 536

Query: 23   HFQGKK 6
             F   +
Sbjct: 537  VFSSAR 542


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  219 bits (558), Expect = 1e-54
 Identities = 119/347 (34%), Positives = 196/347 (56%), Gaps = 5/347 (1%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R  ++ T L++ Q +L +SP +  L  R    R++  F A A + F++QK++ ++L   D
Sbjct: 349  RTAQSLTRLEDIQVELLTSPSDT-LFRREHVARKQWIFFAAALESFFRQKSRIRWLHEGD 407

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTDPA 669
              T+FFH     +   N I  L  +DG    +++Q+   L+ YY  L G    S+   P 
Sbjct: 408  ANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIP--SENVTPF 465

Query: 668  ILANGQSLNREEWDG-----LTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIV 504
             +   + L     D      LT   ++EE+   L ++  +K+ GPDGF  +FF + W IV
Sbjct: 466  SVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIV 525

Query: 503  GNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILAT 324
             +  +AA++EFF SG L + +N   + LIPK T    ++ FRP++CC+  YKVI++I++ 
Sbjct: 526  KSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISR 585

Query: 323  RLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVS 144
            RL   +   +   Q  F+KGR + +N+ L  EL+  +     + R  +++D+ KA+D+V+
Sbjct: 586  RLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVN 645

Query: 143  WKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
            W+FL  +LK LD P +FI W+  C++S S+S++ NG L G FQGKKG
Sbjct: 646  WEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKG 692


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  219 bits (558), Expect = 1e-54
 Identities = 119/347 (34%), Positives = 196/347 (56%), Gaps = 5/347 (1%)
 Frame = -1

Query: 1028 RALKAKTELKEAQSQLESSPGNADLEARLPSLRERATFLATAEKHFYQQKAKCKFLVYSD 849
            R  ++ T L++ Q +L +SP +  L  R    R++  F A A + F++QK++ ++L   D
Sbjct: 306  RTAQSLTRLEDIQVELLTSPSDT-LFRREHVARKQWIFFAAALESFFRQKSRIRWLHEGD 364

Query: 848  KCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTDPA 669
              T+FFH     +   N I  L  +DG    +++Q+   L+ YY  L G    S+   P 
Sbjct: 365  ANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIP--SENVTPF 422

Query: 668  ILANGQSLNREEWDG-----LTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIV 504
             +   + L     D      LT   ++EE+   L ++  +K+ GPDGF  +FF + W IV
Sbjct: 423  SVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIV 482

Query: 503  GNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILAT 324
             +  +AA++EFF SG L + +N   + LIPK T    ++ FRP++CC+  YKVI++I++ 
Sbjct: 483  KSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISR 542

Query: 323  RLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVS 144
            RL   +   +   Q  F+KGR + +N+ L  EL+  +     + R  +++D+ KA+D+V+
Sbjct: 543  RLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVN 602

Query: 143  WKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
            W+FL  +LK LD P +FI W+  C++S S+S++ NG L G FQGKKG
Sbjct: 603  WEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKG 649


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  219 bits (557), Expect = 2e-54
 Identities = 118/311 (37%), Positives = 186/311 (59%), Gaps = 7/311 (2%)
 Frame = -1

Query: 914  LATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSL----E 747
            LA AE+ F+ QK+   +L   D  T +FH MA      N I+ L  + G    +     E
Sbjct: 341  LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400

Query: 746  QVGKELVNYYEQLF-GTEHQSQ--PTDPAILANGQSLNREEWDGLTAEVTDEEVLSALKN 576
             + +   N++E L  G E ++    +D  +L + +  + ++ + L    +D ++  A  +
Sbjct: 401  GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRC-SVDQINDLERSFSDLDIQEAFFS 459

Query: 575  VEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEP 396
            +  +K++GPDG+SS+FFK  W +VG +   AV+EFF SGQLLKQWN   + LIPK T+  
Sbjct: 460  LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519

Query: 395  TVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRG 216
             ++DFRPISC +  YKVI+K+L +RL  +L  +I+ +Q+AF+ GR + +N+ L  E++ G
Sbjct: 520  KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579

Query: 215  YNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNG 36
            YN K IS R ++K+DL+KAFDSV W F+    + L  P  F+ W+ +C+++  FS+ VNG
Sbjct: 580  YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNG 639

Query: 35   GLFGHFQGKKG 3
               G F+  KG
Sbjct: 640  SSSGFFKSNKG 650


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  219 bits (557), Expect = 2e-54
 Identities = 118/311 (37%), Positives = 186/311 (59%), Gaps = 7/311 (2%)
 Frame = -1

Query: 914  LATAEKHFYQQKAKCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSL----E 747
            LA AE+ F+ QK+   +L   D  T +FH MA      N I+ L  + G    +     E
Sbjct: 341  LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400

Query: 746  QVGKELVNYYEQLF-GTEHQSQ--PTDPAILANGQSLNREEWDGLTAEVTDEEVLSALKN 576
             + +   N++E L  G E ++    +D  +L + +  + ++ + L    +D ++  A  +
Sbjct: 401  GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRC-SVDQINDLERSFSDLDIQEAFFS 459

Query: 575  VEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEP 396
            +  +K++GPDG+SS+FFK  W +VG +   AV+EFF SGQLLKQWN   + LIPK T+  
Sbjct: 460  LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519

Query: 395  TVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRG 216
             ++DFRPISC +  YKVI+K+L +RL  +L  +I+ +Q+AF+ GR + +N+ L  E++ G
Sbjct: 520  KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579

Query: 215  YNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNG 36
            YN K IS R ++K+DL+KAFDSV W F+    + L  P  F+ W+ +C+++  FS+ VNG
Sbjct: 580  YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNG 639

Query: 35   GLFGHFQGKKG 3
               G F+  KG
Sbjct: 640  SSSGFFKSNKG 650


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  215 bits (547), Expect = 3e-53
 Identities = 113/294 (38%), Positives = 171/294 (58%), Gaps = 3/294 (1%)
 Frame = -1

Query: 875 KCKFLVYSDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGT- 699
           KC+  V  D+  K FH         N I  +   DG +  S + +  E VNY++    T 
Sbjct: 84  KCQTDV-GDRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTI 142

Query: 698 --EHQSQPTDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFF 525
             +++    +          + ++   LT  VT EE+   + ++  DKS GPDG++S+F+
Sbjct: 143 PADYEGMCVEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFY 202

Query: 524 KKTWTIVGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKV 345
           K +W I+G++ + A++ FFA G L K  N  I+ALIPK      + D+RPISCC+V YK 
Sbjct: 203 KASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKA 262

Query: 344 ISKILATRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLK 165
           ISKILA RL  +L   I   Q+AFVK R +++N+ L  EL++ Y++  IS RC +KID+ 
Sbjct: 263 ISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDIS 322

Query: 164 KAFDSVSWKFLEEMLKGLDFPPLFISWVMECVTSTSFSLSVNGGLFGHFQGKKG 3
           KAFDS+ W FL  +L  ++FP  FI W+  C+++ SFS+ VNG L G+F+  +G
Sbjct: 323 KAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARG 376


>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
            lycopersicum]
          Length = 421

 Score =  213 bits (541), Expect = 1e-52
 Identities = 111/326 (34%), Positives = 186/326 (57%), Gaps = 2/326 (0%)
 Frame = -1

Query: 1007 ELKEAQSQLESSPGNADL--EARLPSLRERATFLATAEKHFYQQKAKCKFLVYSDKCTKF 834
            EL E + QL +   +  +  E  LP   E+ + +   E+   +QKA+ K++   D   K+
Sbjct: 2    ELAEIEEQLYNKENDKLITKEEELPIKLEKWSMI---EESAQRQKARAKWIQLGDANNKY 58

Query: 833  FHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHQSQPTDPAILANG 654
            F ++ K   +  +I ++    G +    +++  E+V +Y+ L GT               
Sbjct: 59   FSSVIKERTQNKHIRNILSIHGRMLYEPQEIQDEVVLFYKSLMGT--------------- 103

Query: 653  QSLNREEWDGLTAEVTDEEVLSALKNVEDDKSAGPDGFSSKFFKKTWTIVGNDFLAAVKE 474
                        + VT+E++ +AL+++ +DK+ G DG+++ FFK TW I+ ND +  V+ 
Sbjct: 104  ------------SAVTEEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDIIEVVQS 151

Query: 473  FFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPII 294
            FF  G+L K +N  +V+LIPK      V ++R I+CC+V YK+ISK++  R+  V+  +I
Sbjct: 152  FFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDVIHNVI 211

Query: 293  NEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKG 114
             ++Q  F+ GR I +NI L  EL+  Y RK ISPR ++KIDL+K +DSV W FL++++ G
Sbjct: 212  CDSQVGFILGRKISENILLAHELVNSYTRKNISPRSMLKIDLQKVYDSVEWPFLKQVMVG 271

Query: 113  LDFPPLFISWVMECVTSTSFSLSVNG 36
            L FP +F  WVM CV + ++++ VNG
Sbjct: 272  LGFPDMFTQWVMHCVKTVNYTIVVNG 297