BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00016919
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    75   1e-11
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    72   6e-11
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ...    68   1e-09
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    66   4e-09
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A...    66   4e-09
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    66   4e-09
gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003...    66   4e-09
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    66   5e-09
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    65   9e-09
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    64   3e-08
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    63   5e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   5e-08
gb|EOY19540.1| Ribonuclease H protein, putative [Theobroma cacao]      62   6e-08
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    62   6e-08
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    61   1e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    61   1e-07
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    61   1e-07
ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    61   2e-07
ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein A...    60   2e-07

>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -3

Query: 301  KNGGKIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWK 122
            K+  KIK+F+WR L   LP AD +I+RG++IDP C++CG+  E   H+LF CS  + VW 
Sbjct: 826  KSSPKIKMFLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWA 885

Query: 121  LAPV 110
            L+ V
Sbjct: 886  LSGV 889


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/60 (51%), Positives = 42/60 (70%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
            KIK+F+WR L + LP A  +I+RG+ IDP C+VCGE  E + H+LF CS  + VW L+ V
Sbjct: 1056 KIKLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGV 1115


>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
            K+K+F+W+ L   +P  + L++R + IDP CK CG +NE + H+LFHC   Q VW LAP+
Sbjct: 1259 KVKLFVWKVLKGAVPVGERLLERHIDIDPRCKRCG-SNESITHLLFHCQFAQRVWHLAPL 1317


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
            K+KIF+WR L NILPTA+NL KR    +PIC+ C    E + H+L  C   + +W LAP+
Sbjct: 1144 KVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPL 1203


>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 335

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
           KIKIF+W+   N+LPTA+NL KRG+  +  CK CG   E + H+L  C   + VW+ +PV
Sbjct: 28  KIKIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPV 87


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 765

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
           K+KIF+WR L NILPTA+NL KR    +PIC+ C    E + H+L  C   + +W LAP+
Sbjct: 457 KVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPL 516


>gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana]
          Length = 1557

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCS 143
            KIK+F+WR L   LP AD +++RG+ +DP C++CG+  E + H+LF CS
Sbjct: 1328 KIKLFLWRILSAALPVADQILRRGMNVDPCCQICGQEGESINHVLFTCS 1376


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
           KIK F WR  HN LPTA NL +R L  D  C+ CGEA+E + H+LF C  ++ +W+ A +
Sbjct: 509 KIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHI 568

Query: 109 R 107
           +
Sbjct: 569 K 569


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 494

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
           KIKIFIWR   N+LPTA+NL KR +  +  CK CG   E   H L  C   + VW+L+P+
Sbjct: 219 KIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKKVWQLSPM 278

Query: 109 RS 104
            S
Sbjct: 279 AS 280


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKL 119
           KIK F+WR LHN  P  DNLI+RG+ I P C VC +  E   H+ F C   + VW+L
Sbjct: 153 KIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMARQVWEL 209


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLA 116
            KIKIF+WR + N+LPTA NL +R +   PIC+ CG  NE + H L  C   + VW+ A
Sbjct: 930  KIKIFMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNA 987


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 24/61 (39%), Positives = 38/61 (62%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
            K+K+F W+ +HN L    N+ KRG+ ID  C  CGE  E  EH+++ C ++   W ++P+
Sbjct: 1062 KVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPL 1121

Query: 109  R 107
            R
Sbjct: 1122 R 1122


>gb|EOY19540.1| Ribonuclease H protein, putative [Theobroma cacao]
          Length = 288

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = -3

Query: 298 NGGKIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVW 125
           +  K+++F+WR LH+ LPTA  L  RGL   P+C  CG + E++ H+L  CS+ +  W
Sbjct: 159 SSNKVRMFVWRVLHDSLPTASWLQNRGLVYSPVCLSCGYSEEQLIHVLHDCSRVKRTW 216


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLA 116
            KIK FIWRCL   L T   L  R +  DP C+ C  A+E + HI+F CS  Q+VW+ A
Sbjct: 1396 KIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSA 1453


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLA 116
           KIKIF+WR + N+LPT  NL +R +   PIC+ CG  NE + H L  C   + VW+ A
Sbjct: 133 KIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNA 190


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/64 (40%), Positives = 36/64 (56%)
 Frame = -3

Query: 289  KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
            KI+IF+W+ LH  +P  D L  RG+  D  C +C   NE + HILF C   + VW +  +
Sbjct: 1053 KIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHL 1112

Query: 109  RSLG 98
             S G
Sbjct: 1113 SSAG 1116


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/62 (41%), Positives = 37/62 (59%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKLAPV 110
           KIK+F+W+ L   +   D L  RG+ I+  C +C E NE + HILF C   + VW L P+
Sbjct: 783 KIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPM 842

Query: 109 RS 104
           +S
Sbjct: 843 QS 844


>ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 677

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/55 (47%), Positives = 34/55 (61%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVW 125
           K+  F W+ L N LPT +NL KR +   P+CK+CG   E +EH L  C  T+LVW
Sbjct: 432 KVSNFTWKALANALPTCENLHKRNIGNSPLCKICGLFPETIEHCLLLCEWTELVW 486


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWKL 119
           KIKIF+W  L+N++ T DNLIKR    DP C  C + +E + H+ FHCS  + VW +
Sbjct: 665 KIKIFLWLLLNNVILTKDNLIKRKWIGDPTCYFC-DQDESVSHLFFHCSTAKAVWAI 720


>ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 434

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -3

Query: 289 KIKIFIWRCLHNILPTADNLIKRGLTIDPICKVCGEANERMEHILFHCSKTQLVWK 122
           K+KIF+WR + N+LPTA NL KR + ++ +C  CG   E + H L  C   + VWK
Sbjct: 209 KVKIFMWRAVKNLLPTASNLWKRKIVVELVCVRCGCRREDVAHALLECKAARRVWK 264