BLASTX nr result
ID: Rehmannia23_contig00016828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00016828
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293... 113 2e-23
ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307... 112 5e-23
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 111 1e-22
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 108 7e-22
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 107 2e-21
ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292... 107 2e-21
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 103 2e-20
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao] 101 9e-20
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 100 2e-19
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 99 4e-19
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo... 99 8e-19
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi... 99 8e-19
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 99 8e-19
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 98 1e-18
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao] 98 1e-18
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 98 1e-18
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 97 2e-18
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 97 2e-18
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 97 2e-18
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 97 3e-18
>ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293221 [Fragaria vesca
subsp. vesca]
Length = 461
Score = 113 bits (283), Expect = 2e-23
Identities = 53/113 (46%), Positives = 74/113 (65%)
Frame = -3
Query: 341 LISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAA 162
+I +V+ +N LT IPS E+K A F M SAPGPDGF G FY WD++ +VVA
Sbjct: 289 VIPSLVTNAENDWLTVIPSTEEIKNAVFAMDASSAPGPDGFPGCFYQSCWDIVGSDVVAC 348
Query: 161 IRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILAT 3
+R FF+ +N +F+ L+PK ++A+ + FRPI ++NFLFKII KILA+
Sbjct: 349 VRQFFMQNWLLPNINCNFLVLLPKVQDAHEITQFRPITLANFLFKIILKILAS 401
>ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307720 [Fragaria vesca
subsp. vesca]
Length = 326
Score = 112 bits (280), Expect = 5e-23
Identities = 55/113 (48%), Positives = 75/113 (66%)
Frame = -3
Query: 344 HLISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVA 165
++I +VS +N L AIP+ EVK F M DSAPG DG++G F+ WD++ V+
Sbjct: 149 NVIPSVVSYSENDSLLAIPTADEVKNVVFSMNADSAPGKDGYTGHFFQACWDVVGLYVIG 208
Query: 164 AIRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
AI+ FF T LN++F+ALIPK +EA+V+ F+PI M+NF FKIIT ILA
Sbjct: 209 AIKSFFQTGYILPNLNSNFVALIPKVQEADVITQFQPIAMANFSFKIITHILA 261
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 111 bits (277), Expect = 1e-22
Identities = 52/106 (49%), Positives = 71/106 (66%)
Frame = -3
Query: 323 SMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYFFV 144
+ + N LT IPS E+K+A F + DSAPGPDGF FY +WD++ E+V+ A+ FF
Sbjct: 105 NQIANHALTMIPSNDEIKQAVFSLNNDSAPGPDGFGSCFYQIYWDIVKEDVIKAVLQFFN 164
Query: 143 TASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
T NA+ + LIPKT+ A+ ++ FRPI M+NF FKII+KILA
Sbjct: 165 TGWILPNFNANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILA 210
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 108 bits (270), Expect = 7e-22
Identities = 50/110 (45%), Positives = 69/110 (62%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
I P+VS DN LT IP++ EVK+A F + APGPDGF+ FYH +W +IS +V I
Sbjct: 307 IEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREI 366
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKIL 9
R FF + +FP +N + + LIPK V D+RPI + N +KI+ KI+
Sbjct: 367 RLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIM 416
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 107 bits (267), Expect = 2e-21
Identities = 49/111 (44%), Positives = 72/111 (64%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
I +VS VDN L +P EVK A F + D APGP+GF G FY +WD++ +V+ ++
Sbjct: 426 IPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSV 485
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
+ FF++ +N++ + LIPK A V+ D+RPI ++NF FKII+KILA
Sbjct: 486 QDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILA 536
>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
subsp. vesca]
Length = 851
Score = 107 bits (266), Expect = 2e-21
Identities = 51/113 (45%), Positives = 74/113 (65%)
Frame = -3
Query: 344 HLISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVA 165
++I +V+ +N LT IPS E+ +A M LDSA GPDGF+G F+ WD++ +VV
Sbjct: 365 NIIPSMVTEEENIFLTTIPSPEEILKAVKAMDLDSALGPDGFNGHFFASCWDIVGVDVVN 424
Query: 164 AIRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
A++YFFV A N+ + LIPK + A+ + FRPI +++F+FKII KILA
Sbjct: 425 AVQYFFVNGQLSASFNSGLIILIPKVEHADSTKQFRPIALTDFVFKIIPKILA 477
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 103 bits (258), Expect = 2e-20
Identities = 47/103 (45%), Positives = 69/103 (66%)
Frame = -3
Query: 314 DNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYFFVTAS 135
D+ LLT + + E+K+ F M D +PGPDG++ FY W++I +EV+ AI+ FF
Sbjct: 166 DHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGF 225
Query: 134 FPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
P G+N++ +ALIPK KEA ++D+RPI N L+K I+KILA
Sbjct: 226 LPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILA 268
>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
Length = 2214
Score = 101 bits (252), Expect = 9e-20
Identities = 48/108 (44%), Positives = 68/108 (62%)
Frame = -3
Query: 329 IVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYF 150
I+S DN L A PS EVKEA F++ DS GPDGFS FY H WD+I +++ A+ F
Sbjct: 1265 IISTTDNEFLCATPSLQEVKEAVFNINKDSVAGPDGFSSLFYQHCWDIIKQDLFEAVLDF 1324
Query: 149 FVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
F + P G+ ++ + L+PKT+ + +FRPI + L KI+TK+LA
Sbjct: 1325 FKGSPLPRGITSTTLVLLPKTQNVSQWSEFRPISLCTVLNKIVTKLLA 1372
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 100 bits (249), Expect = 2e-19
Identities = 51/112 (45%), Positives = 69/112 (61%)
Frame = -3
Query: 341 LISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAA 162
L I+S DN L A P+ EVKEA F + +SA GPDGFS FY WD+I+ ++ A
Sbjct: 1260 LCPSIISDTDNGFLCAEPTLQEVKEAVFGIDPESAAGPDGFSSHFYQQCWDIIAHDLFEA 1319
Query: 161 IRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
++ FF A P G+ ++ + LIPKT A+ +FRPI + + KIITKILA
Sbjct: 1320 VKEFFHGADIPQGMTSTTLVLIPKTTSASKWSEFRPISLCTVMNKIITKILA 1371
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/110 (45%), Positives = 65/110 (59%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
+SPI+S N L I S E+KEA F + D APGPDGFS F+H +WD+I +V I
Sbjct: 353 LSPIISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDI 412
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKIL 9
R FFV + LN + + LIPK V D+RPI + N +KI+ KIL
Sbjct: 413 RSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKIL 462
>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
Length = 1256
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = -3
Query: 341 LISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAA 162
LI P V+ N L SE E+ A F +G APGPDGF GRFY W ++ +++V A
Sbjct: 490 LIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRA 549
Query: 161 IRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKIL 9
++ FF + + P+G+N + + LIPKT++ ++DFRPI + N ++KI++K L
Sbjct: 550 VQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCL 600
>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
Length = 633
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = -3
Query: 341 LISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAA 162
LI P V+ N L SE E+ A F +G APGPDGF GRFY W ++ +++V A
Sbjct: 490 LIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRA 549
Query: 161 IRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKIL 9
++ FF + + P+G+N + + LIPKT++ ++DFRPI + N ++KI++K L
Sbjct: 550 VQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCL 600
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/106 (40%), Positives = 68/106 (64%)
Frame = -3
Query: 323 SMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYFFV 144
S ++ LLT + + E+K+ F M D +PGPDGF+ F+ W+++ E + AI+ FF
Sbjct: 850 SETEHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFA 909
Query: 143 TASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
P G+N + +ALIPK KEA ++D+RPI N ++K+I+KI+A
Sbjct: 910 KGFLPKGINTTILALIPKKKEAKEMKDYRPISCCNVIYKVISKIIA 955
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/102 (46%), Positives = 68/102 (66%)
Frame = -3
Query: 311 NALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYFFVTASF 132
NA+L A S+ EVKEA F+M L+ +PGPDG + FY FW ++ ++V++A F SF
Sbjct: 406 NAMLLAPFSDIEVKEALFEMHLEKSPGPDGMNPTFYQKFWHIVGKDVISACLKFIHDCSF 465
Query: 131 PAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
P GLN + + LIPK + ++ D RPI + N L+KII+K+LA
Sbjct: 466 PVGLNDTSIVLIPKKHKPELLSDTRPIALCNVLYKIISKMLA 507
>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
Length = 2249
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -3
Query: 341 LISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAA 162
LI I+S +N LL A PS EVK+A F + +SA GPDGFS FY W++I+++++ A
Sbjct: 1295 LIPSIISNSENELLCAEPSLQEVKDAVFGINSESAAGPDGFSSYFYQQCWNIIAQDLLDA 1354
Query: 161 IRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
+R FF A+ P G+ ++ + L+PK A+ DFRPI + + KIITK+L+
Sbjct: 1355 VRDFFHGANIPRGVTSTTLILLPKKSSASKWSDFRPISLCTVMNKIITKLLS 1406
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/111 (42%), Positives = 67/111 (60%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
I +V N LLT +P++ EVK A FD+ D APGPD F F+ +W+++ ++V A+
Sbjct: 161 IPKLVDATTNRLLTMLPTKEEVKNAVFDLNSDDAPGPDVFGACFFQIYWNIVKKDVYEAV 220
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
FF P NA+ + LIPKT A+ V+ +R I + NF FKII K+LA
Sbjct: 221 LDFFKNGWLPNNFNANSIILIPKTPNADSVDQYRTIALVNFKFKIINKVLA 271
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/112 (41%), Positives = 71/112 (63%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
I PI++ N L +P E++ M SAPGPDGF G+FY +D+I E+++AA+
Sbjct: 320 IKPIITQERNDSLDRLPDMDELRGVIMSMNPHSAPGPDGFGGKFYQVCFDIIKEDLLAAV 379
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILAT 3
+YF++ S P L + + L+PKT ++DFRPI +SNF KII+KI++T
Sbjct: 380 KYFYIGNSMPRYLTHASLILLPKTDHPCRLKDFRPISLSNFANKIISKIIST 431
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/112 (41%), Positives = 70/112 (62%)
Frame = -3
Query: 344 HLISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVA 165
+L+SPIVS DNA LT+ S E+K A FD+ D +PGPDGF F+ +W LI + V
Sbjct: 426 NLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCR 485
Query: 164 AIRYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKIL 9
A++ FF + +N +F+ALIPK + FRPI + + ++K+I+KI+
Sbjct: 486 AVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKII 537
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/106 (42%), Positives = 66/106 (62%)
Frame = -3
Query: 323 SMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAIRYFFV 144
S + +LTA S E++ A F M D +PGPDG++ FY WD+I E V A++ FF
Sbjct: 857 SPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFE 916
Query: 143 TASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
P G+N + +ALIPK EA ++D+RPI N ++K+I+KI+A
Sbjct: 917 KGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIA 962
>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/111 (45%), Positives = 69/111 (62%)
Frame = -3
Query: 338 ISPIVSMVDNALLTAIPSESEVKEAAFDMGLDSAPGPDGFSGRFYHHFWDLISEEVVAAI 159
I ++S DN LL A P EVK+A F + DS GPDGFS FY W +I+E+++AA+
Sbjct: 382 IPQMLSDADNNLLCAEPQLQEVKDAVFAIDKDSVVGPDGFSSFFYQQCWPIIAEDLLAAV 441
Query: 158 RYFFVTASFPAGLNASFMALIPKTKEANVVEDFRPIVMSNFLFKIITKILA 6
R FF A FP G+ ++ + L+ K +A DFRPI + L KI+TK+LA
Sbjct: 442 RDFFKGAVFPRGVTSTTLVLLAKKPDAATWSDFRPISLCTILNKIVTKLLA 492