BLASTX nr result
ID: Rehmannia23_contig00016694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00016694
(857 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 280 5e-73
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 276 5e-72
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 273 4e-71
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 269 8e-70
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 269 1e-69
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 263 5e-68
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 263 6e-68
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 263 6e-68
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 262 1e-67
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 262 1e-67
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 261 2e-67
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 258 3e-66
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 254 2e-65
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 254 4e-65
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 253 5e-65
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 252 1e-64
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 252 1e-64
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 249 9e-64
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 248 3e-63
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 248 3e-63
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform 1 [Solanum lycopersicum]
gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like isoform 2 [Solanum
lycopersicum]
Length = 237
Score = 280 bits (716), Expect = 5e-73
Identities = 139/241 (57%), Positives = 185/241 (76%), Gaps = 1/241 (0%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 190
MSRS + ++LKRKRP++ GLVDAE +LN++KSK++ G+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDK 59
Query: 191 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 370
+ SL+ K LIK+V +IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 371 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 550
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSI 178
Query: 551 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 727
PIG CYR+A GV GP+ +G A+IPCGACPRIS+CT DG+IS TCVY+TKWL I+
Sbjct: 179 PIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIE 236
Query: 728 F 730
F
Sbjct: 237 F 237
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum tuberosum]
Length = 237
Score = 276 bits (707), Expect = 5e-72
Identities = 138/241 (57%), Positives = 183/241 (75%), Gaps = 1/241 (0%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 190
MSRS + +++KRKR ++ GLVDAE +LN++KSK++LG+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDK 59
Query: 191 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 370
+ SL+ K LIK+V IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 371 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 550
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSI 178
Query: 551 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 727
PIG CYR+A G GP+ +G A+IPCGACPRIS+CT DG+IS TCVYYTKWL I+
Sbjct: 179 PIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIE 236
Query: 728 F 730
F
Sbjct: 237 F 237
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 273 bits (699), Expect = 4e-71
Identities = 139/241 (57%), Positives = 172/241 (71%), Gaps = 3/241 (1%)
Frame = +2
Query: 5 EGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADN 178
EGMSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DN
Sbjct: 60 EGMSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 117
Query: 179 VVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALK 358
VVTKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 118 VVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILK 177
Query: 359 LVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGD 538
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G+
Sbjct: 178 KTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGE 237
Query: 539 YYSIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKW 715
+ SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKW
Sbjct: 238 FSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297
Query: 716 L 718
L
Sbjct: 298 L 298
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (688), Expect = 8e-70
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 184
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 185 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 364
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118
Query: 365 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 544
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 545 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (687), Expect = 1e-69
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 184
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 185 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 364
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 365 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 544
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 545 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 263 bits (673), Expect = 5e-68
Identities = 130/229 (56%), Positives = 166/229 (72%), Gaps = 2/229 (0%)
Frame = +2
Query: 38 SLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLA 211
+LKRK+PE+ P L + E + N+I SK+D+GIWTR++K ET L DNVV KS+K L A
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 212 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 391
K LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD + I LK VC + + K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 392 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 571
VATLEG+ + IK++G+ +++ QQI EI+ ++VLDN +IEVKS G+ ++ IPIGK CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 572 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
+ G A PR+GA A+IPCG CPRIS CT DG+IS TCVYY+KWL
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 263 bits (672), Expect = 6e-68
Identities = 132/239 (55%), Positives = 167/239 (69%), Gaps = 2/239 (0%)
Frame = +2
Query: 8 GMSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNV 181
GMSR + PSSLKRKRPE P L + E + ++I+SK+D+GIWTR++K E KL DNV
Sbjct: 52 GMSR-VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNV 110
Query: 182 VTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKL 361
V KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISGG WY G LD + I++L+
Sbjct: 111 VNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQ 170
Query: 362 VCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDY 541
+C R + + VATLE V + I D++ QQI EIL +++LDN I+EVKS G+G++
Sbjct: 171 LCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEF 230
Query: 542 YSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIP GK CYR + P+ GA A+IPCG CPRIS CT DG+IS TCVYY KWL
Sbjct: 231 ASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWL 289
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 263 bits (672), Expect = 6e-68
Identities = 133/239 (55%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 184
MSRS SLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 185 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 364
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 365 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 544
C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 545 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+IS +C YY KWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 262 bits (670), Expect = 1e-67
Identities = 132/238 (55%), Positives = 167/238 (70%), Gaps = 2/238 (0%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 184
MSR L PSSLKRKRPE P L + E + ++I+SK+D+GIWTR++K E KL DNVV
Sbjct: 1 MSR-LQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVV 59
Query: 185 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 364
KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISGG WY G LD + I++LK +
Sbjct: 60 NKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 119
Query: 365 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 544
C R + + VATLE V + I D++ QQI EIL +++LDN I+EVKS G+G++
Sbjct: 120 CKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFA 179
Query: 545 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIP G+ CY+ G+ P+ GA A+IPCG CPRIS CT DG+IS TCVYY KWL
Sbjct: 180 SIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWL 237
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 262 bits (669), Expect = 1e-67
Identities = 129/234 (55%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Frame = +2
Query: 23 LVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSV 196
L SSLKRKR + L L D E + NLI SK+D+GIWT ++K ET L D++V KS+
Sbjct: 4 LQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 197 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 376
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG WYN G LD I+ +K VC +Y
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123
Query: 377 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 556
+ QKVAT +GV +K+GV ++++QQI EIL ++VLD++I+EVKSTG GD+ S+P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183
Query: 557 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
G+ CYR G + GA A+IPCG CPRI+ CT DG+IS TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 261 bits (668), Expect = 2e-67
Identities = 124/231 (53%), Positives = 168/231 (72%), Gaps = 2/231 (0%)
Frame = +2
Query: 32 PSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSL 205
PS+LKRK+P++ P L + E + ++I+SK+D+GIWTR++K E L DN+V KS+KSL
Sbjct: 4 PSALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 206 LAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRM 385
AK LIKEVVN+Q+K +K YMA EFEPSKE++GG+WY+NG LDK I +K + +
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQ 123
Query: 386 QKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKT 565
KVATLEG+ +E+KK+G+ + QQI EIL +VLD + EVKSTG+G++ S P+GK
Sbjct: 124 LKVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKV 183
Query: 566 CYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
CY+ G + P++GA A+IPCG CPRIS CT DG+IS TCVY+TKWL
Sbjct: 184 CYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWL 234
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 258 bits (658), Expect = 3e-66
Identities = 128/234 (54%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Frame = +2
Query: 23 LVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSV 196
L SSLKRKR + L + D E + NLI SK+D+GIWT ++K ET L D++V KS+
Sbjct: 4 LQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 197 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 376
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG+WY G LD I+ +K VC +
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKC 123
Query: 377 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 556
+ QKVAT +GV +K+GV T ++++QQI EIL ++VLD++I EVKSTGLGD+ S+P+
Sbjct: 124 IFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPV 183
Query: 557 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
G+ CYR G + GA A+IPCG CPRI+ CT DG+IS TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 254 bits (650), Expect = 2e-65
Identities = 125/229 (54%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
Frame = +2
Query: 44 KRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETK--LADNVVTKSVKSLLA 211
KRKRPE+ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 212 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 391
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 392 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 571
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 572 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
+ G P+ G+ A+IPCG CP+I++CT DGVIS TCVYYT WL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWL 231
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 254 bits (648), Expect = 4e-65
Identities = 131/238 (55%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Frame = +2
Query: 2 IEGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLAD 175
I GMSRS SLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L D
Sbjct: 88 ILGMSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPD 145
Query: 176 NVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDAL 355
NVVTKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I L
Sbjct: 146 NVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKIL 205
Query: 356 KLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLG 535
K C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G
Sbjct: 206 KETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSG 265
Query: 536 DYYSIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYY 706
++ SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+IS + V+Y
Sbjct: 266 EFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 253 bits (647), Expect = 5e-65
Identities = 124/229 (54%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
Frame = +2
Query: 44 KRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETK--LADNVVTKSVKSLLA 211
KRKRP++ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 212 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 391
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 392 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 571
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 572 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
+ G P+ G+ A+IPCG CP+I++C DGVIS TCVYYTKWL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWL 231
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 252 bits (643), Expect = 1e-64
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 5/230 (2%)
Frame = +2
Query: 44 KRKRPETQLPG--LVDAEHAILNLIKS-KRDLGIWTREIKLETK--LADNVVTKSVKSLL 208
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 209 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 388
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 389 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 568
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 569 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
Y+ G P+ G+ A++PCG CP+I+ CT DGVIS TCVYYTKWL
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 232
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 252 bits (643), Expect = 1e-64
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 5/230 (2%)
Frame = +2
Query: 44 KRKRPETQLPG--LVDAEHAILNLIKS-KRDLGIWTREIKLETK--LADNVVTKSVKSLL 208
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 209 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 388
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 389 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 568
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 569 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
Y+ G P+ G+ A++PCG CP+I+ CT DGVIS TCVYYTKWL
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 250
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 249 bits (636), Expect = 9e-64
Identities = 123/236 (52%), Positives = 167/236 (70%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 190
MSR L P++LKRKRP L + E + ++I+ K+D+GI R++K E L DN+VTK
Sbjct: 1 MSR-LQGPNALKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTK 59
Query: 191 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 370
+KSLLAK LIKEV NIQN+ +K +++ EFEPS EI+GG WY G LD + I+ LK C+
Sbjct: 60 CLKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCW 119
Query: 371 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 550
R + KVATLEGV + IK++ V ++S QQI EI+ ++VLDN+++EVKS+G G++ SI
Sbjct: 120 RKIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASI 179
Query: 551 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
P+GK CY+ G G P++G A+IPCG CP+IS CT DG+IS TCVYY KWL
Sbjct: 180 PVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWL 235
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 248 bits (632), Expect = 3e-63
Identities = 119/238 (50%), Positives = 176/238 (73%), Gaps = 2/238 (0%)
Frame = +2
Query: 11 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 184
MSR L PSSLKRK+P+++ P L + E I N+I+SK+D+GIW +++K K+ DNV
Sbjct: 1 MSR-LQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVA 59
Query: 185 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 364
K++KSL K LIKEVVNIQ + KK Y+A EFEP+ EI+GG WY+NG++D +I+ LK
Sbjct: 60 NKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119
Query: 365 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 544
C +++ Q+VATLEG+ + I+K+G+ ++++ QI E++ ++VLDN+++EVKS G+G++
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFD 179
Query: 545 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
SIP+GK CY+ + G P++GA ++IPCG CPRIS CT DG+IS TC YY++WL
Sbjct: 180 SIPVGKVCYK-STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWL 236
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 248 bits (632), Expect = 3e-63
Identities = 125/227 (55%), Positives = 159/227 (70%), Gaps = 2/227 (0%)
Frame = +2
Query: 44 KRKRPETQ--LPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLAKG 217
KRK+PE+ L + E A+ N I+SK+D+GIWTR++K ET L D VV KS+K L AK
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 218 LIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVA 397
LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD I LK C + + KVA
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 398 TLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCYRV 577
T+E V + I + GV T ++ QQI EIL ++VLDN + EVKS G+G++ SIP+GK CY+
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYK- 186
Query: 578 AGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 718
+ G G + P++GA A+IPCG CPRI CT +G+IS TCVYY KWL
Sbjct: 187 SIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWL 233