BLASTX nr result
ID: Rehmannia23_contig00015882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00015882
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 146 2e-33
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 142 3e-32
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 135 4e-30
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 130 2e-28
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 129 3e-28
emb|CAA73803.1| reverse transcriptase [Allium cepa] 128 9e-28
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 128 9e-28
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 127 2e-27
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 127 2e-27
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 127 2e-27
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 127 2e-27
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 127 2e-27
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 126 3e-27
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 125 6e-27
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 124 1e-26
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 123 3e-26
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 122 4e-26
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 121 8e-26
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana] 121 1e-25
gb|ABD96942.1| hypothetical protein [Cleome spinosa] 120 1e-25
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 146 bits (369), Expect = 2e-33
Identities = 61/113 (53%), Positives = 88/113 (77%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPIACC V+YK+I+K+L ++++ ++ ++++ AQS FI GR+I DNI LA E+IR Y R
Sbjct: 515 RPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKH 574
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
+SPRC +KVD++KAYD++ WSFLE +L GFP F+ W+MECVST SYS+ +
Sbjct: 575 MSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLV 627
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 142 bits (359), Expect = 3e-32
Identities = 63/113 (55%), Positives = 86/113 (76%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPIACC+ +YK+I+KIL +L++V+ +++D AQ+ FI R+I DNI LA E+IR Y R
Sbjct: 518 RPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRH 577
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
+SPRC IKVD++KAYD++ W FLE +L LGFP +FI W+M CV T SYSI +
Sbjct: 578 VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILL 630
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 135 bits (341), Expect = 4e-30
Identities = 59/111 (53%), Positives = 87/111 (78%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ V+P I QSAF+ R + +N+ LA E++++Y +
Sbjct: 945 RPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDT 1004
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
IS RCAIK+D+ KA+D++ WSFL+ VL+ L FPP F+ WVM CV+TAS+S+
Sbjct: 1005 ISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCVTTASFSV 1055
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 130 bits (326), Expect = 2e-28
Identities = 55/113 (48%), Positives = 87/113 (76%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPIACC+V+YK+I+KIL S+++ V+ ++ QSAF+ GR I DNI L+ E++++Y+R
Sbjct: 198 RPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKG 257
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
ISPRC +K+DL+KAY+++ W F++ ++ LGF F++WVM C++TASY+ I
Sbjct: 258 ISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNI 310
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 129 bits (325), Expect = 3e-28
Identities = 57/111 (51%), Positives = 85/111 (76%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ V+P+ I QSAFI R + +N+ LA E++++Y +
Sbjct: 48 RPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDS 107
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
+S RCAIK+D+ KA+D++ WSFL VL L FP F+ W+M CV+TAS+S+
Sbjct: 108 VSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSV 158
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 128 bits (321), Expect = 9e-28
Identities = 52/113 (46%), Positives = 85/113 (75%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCN +YK I+K+LAS+L+ V+P L+ P Q+A++SGRNI D++ L+ E+I+ Y R
Sbjct: 4 RPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRKS 63
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
+PR +K+D+ KA+DT+ W+ + ++L + FPP I+W+ EC+S+ ++SI I
Sbjct: 64 ATPRAMLKLDIMKAFDTLQWNSIVRILGYMNFPPHIIAWIYECISSPTFSINI 116
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 128 bits (321), Expect = 9e-28
Identities = 54/111 (48%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ V+PK I QSAF+ R + +N+ LA EI+++Y +
Sbjct: 418 RPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDS 477
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
+S RCA+K+D+ KA+D++ W FL VL + FPP F W+ C++TAS+S+
Sbjct: 478 VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSV 528
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 127 bits (318), Expect = 2e-27
Identities = 53/113 (46%), Positives = 80/113 (70%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
R I CC V+YK+I+K++ +++ V+ +I +Q FI GR I++NI LA E++ +Y R
Sbjct: 183 RTITCCTVLYKIISKVITNRMHDVIHNVICDSQVGFILGRKISENILLAHELVNSYTRKN 242
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
ISPR +K+DL+K YD++ W FL+QV+ GLGFP +F WVM CV T +Y+I +
Sbjct: 243 ISPRSMLKIDLQKVYDSVEWPFLKQVMVGLGFPDMFTQWVMHCVKTVNYTIVV 295
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 127 bits (318), Expect = 2e-27
Identities = 50/111 (45%), Positives = 85/111 (76%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RP++CCNV+YK+I+KI+A++L+ V+PK I Q+AF+ R + +N+ LA E++++Y +
Sbjct: 57 RPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKES 116
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
+S RCAIK+D+ KA++++ WSF+ +L + FP F+ W+M C+STAS+S+
Sbjct: 117 VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSV 167
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 127 bits (318), Expect = 2e-27
Identities = 56/111 (50%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YK I+KILA++L+ ++PK I QSAF+ R + +N+ LA E++++Y +
Sbjct: 251 RPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDS 310
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
IS RCA+K+D+ KA+D++ WSFL VL + FP FI W+ C+STAS+SI
Sbjct: 311 ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSI 361
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 127 bits (318), Expect = 2e-27
Identities = 55/111 (49%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YK I+K+LA++L+ ++P+ I P QSAFIS R + +N+ LA E++++Y +
Sbjct: 796 RPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDG 855
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
+SPRCA+K+DL KA+D++ W FL L L P FI W+ C+STAS+S+
Sbjct: 856 LSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSV 906
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 127 bits (318), Expect = 2e-27
Identities = 50/111 (45%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCN +YKVI+K+LA +LE+++P I P+QSAF+ GR +T+N+ LA E+++ + +
Sbjct: 523 RPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQAN 582
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
IS R +KVDL+KA+D++ W F+ + L PP F++W+ +C+++ S+SI
Sbjct: 583 ISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSI 633
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 126 bits (316), Expect = 3e-27
Identities = 56/111 (50%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ V+PK I QSAF+ R + +N+ LA E++++Y +
Sbjct: 530 RPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDT 589
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
IS RCAIK+D+ KA+D++ W FL V LGFP FI W+ C++TAS+S+
Sbjct: 590 ISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSV 640
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 125 bits (314), Expect = 6e-27
Identities = 53/111 (47%), Positives = 83/111 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ ++P+ I QSAF+ R + +N+ LA E++++Y +
Sbjct: 177 RPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDS 236
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
IS RCAIK+D+ KA+D++ WSFL L + F P FI W+ C++TAS+S+
Sbjct: 237 ISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSV 287
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 124 bits (312), Expect = 1e-26
Identities = 48/113 (42%), Positives = 84/113 (74%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCN+VYKVI+KI+A++L+ ++ + P Q+AF+ GR++ +N+ LA E+IR+Y +
Sbjct: 4 RPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYNKSS 63
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
+KVD++KA+DT+ W F+ ++L GFPP+F+SW+ EC+++ +S+ +
Sbjct: 64 CLRSSMLKVDIRKAFDTVCWDFVIKILRAQGFPPLFVSWIQECITSPRFSVAL 116
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 123 bits (308), Expect = 3e-26
Identities = 52/111 (46%), Positives = 81/111 (72%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ ++P I QSAF+ R + +N+ LA E++++Y +
Sbjct: 103 RPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDS 162
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
ISPRCA+K+D+ KA+D++ W FL L L FP F W+ C+STA++S+
Sbjct: 163 ISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSV 213
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 122 bits (307), Expect = 4e-26
Identities = 51/111 (45%), Positives = 81/111 (72%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KILA++L+ ++P I QSAF+ R + +N+ LA E++++Y +
Sbjct: 827 RPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKES 886
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
++PRCA+K+D+ KA+D++ W FL L L FP F W+ C+STA++S+
Sbjct: 887 VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSV 937
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 121 bits (304), Expect = 8e-26
Identities = 52/111 (46%), Positives = 81/111 (72%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV+YKVI+KI+A++L+ ++P I QSAF+ R + +N+ LA E++++Y +
Sbjct: 672 RPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDS 731
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
ISPRCA+K+D+ KA+D++ W FL L L FP F W+ C+STA++S+
Sbjct: 732 ISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSV 782
>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
Length = 458
Score = 121 bits (303), Expect = 1e-25
Identities = 51/111 (45%), Positives = 80/111 (72%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCNV++KVI KI+A+ L+ V+P + QSAF+ R + +N+ LA E++++Y +
Sbjct: 271 RPISCCNVIFKVILKIIANPLKRVLPNFVVGNQSAFVQDRLLIENVLLATELVKDYHKES 330
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSI 335
+S CAIK+D+ KA+D++ WS L +VL + FP FI W+M CV+T S+S+
Sbjct: 331 VSTGCAIKIDISKAFDSVQWSVLRKVLEAMKFPLFFIHWIMLCVTTTSFSV 381
>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
Length = 402
Score = 120 bits (302), Expect = 1e-25
Identities = 51/113 (45%), Positives = 82/113 (72%)
Frame = +3
Query: 3 RPIACCNVVYKVITKILASKLESVVPKLIDPAQSAFISGRNITDNIFLAQEIIRNYARVR 182
RPI+CCN +YKVI+KI+A++L+ ++P LI Q+AF GR++ D+I LA E++++Y R
Sbjct: 34 RPISCCNFLYKVISKIIANRLQLLLPWLISGNQAAFQKGRSMGDHIMLAAELVKDYNRPS 93
Query: 183 ISPRCAIKVDLKKAYDTISWSFLEQVLNGLGFPPIFISWVMECVSTASYSICI 341
P +K+D+KKA+D+ISW F+ +L L P +FI W+ EC+++ S+S+ I
Sbjct: 94 AEPSAMLKIDIKKAFDSISWDFILDILRALDLPLVFIGWIRECITSPSFSVAI 146