BLASTX nr result
ID: Rehmannia23_contig00015614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00015614
(559 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006441032.1| hypothetical protein CICLE_v10019503mg [Citr... 303 2e-80
ref|XP_006478018.1| PREDICTED: pentatricopeptide repeat-containi... 298 6e-79
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,... 298 8e-79
ref|XP_004243988.1| PREDICTED: pentatricopeptide repeat-containi... 295 4e-78
ref|XP_006346048.1| PREDICTED: pentatricopeptide repeat-containi... 294 9e-78
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu... 294 1e-77
gb|EOY13804.1| Pentatricopeptide repeat (PPR) superfamily protei... 293 2e-77
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi... 288 6e-76
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi... 288 6e-76
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi... 286 2e-75
ref|XP_002317023.2| hypothetical protein POPTR_0011s14750g [Popu... 285 7e-75
ref|XP_006598186.1| PREDICTED: pentatricopeptide repeat-containi... 283 3e-74
gb|EXB79988.1| hypothetical protein L484_004026 [Morus notabilis] 282 3e-74
ref|XP_006389923.1| hypothetical protein EUTSA_v10018334mg [Eutr... 281 6e-74
gb|ESW21266.1| hypothetical protein PHAVU_005G056300g [Phaseolus... 280 2e-73
ref|XP_006585428.1| PREDICTED: pentatricopeptide repeat-containi... 277 1e-72
ref|XP_004294203.1| PREDICTED: pentatricopeptide repeat-containi... 277 1e-72
ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containi... 277 1e-72
ref|XP_002300545.1| pentatricopeptide repeat-containing family p... 273 2e-71
gb|AAC17075.1| Contains repeats similar to RECA protein gb|L2610... 271 6e-71
>ref|XP_006441032.1| hypothetical protein CICLE_v10019503mg [Citrus clementina]
gi|557543294|gb|ESR54272.1| hypothetical protein
CICLE_v10019503mg [Citrus clementina]
Length = 568
Score = 303 bits (775), Expect = 2e-80
Identities = 149/185 (80%), Positives = 167/185 (90%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNLN+SLQF++RL+QKGLVPNA+TYS LLEAAYKERGV EA +L
Sbjct: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHEAMKL 225
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R EEAIR FRDLP+KGF PNVVSYNILLRSLC
Sbjct: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM G DRSP+IVTYNILIGSLA+HG+TD AL+VLD++ + GRF P+A+
Sbjct: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAA 344
Query: 543 SYNPI 557
SYNPI
Sbjct: 345 SYNPI 349
Score = 81.6 bits (200), Expect = 1e-13
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERG-VDEAKRL 182
+ +YN ++ LC G ++ ++ ++++ + PN TY+ L A E G V EA +
Sbjct: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCEVGKVQEAFAI 399
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
+ + K + Y ++T LC + + +A +L ++ GF P+ +Y+ L+R LC
Sbjct: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTTYGFTPDSYTYSSLIRGLCM 459
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E EEA E+ M D P + +N L+ L RTD +LEV + G+ PN +
Sbjct: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNET 518
Query: 543 SY 548
+Y
Sbjct: 519 TY 520
Score = 75.9 bits (185), Expect = 6e-12
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 35/200 (17%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + +ER++ KG P+ + LL K + +A ++++ +++ G P+ SY
Sbjct: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------- 359
++ LC + V A++L + G+ N V+YN L+R LC
Sbjct: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
Query: 360 ---------------YEARW-EEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQAL 491
Y+ R EA +LL +++ P++V+YN+L+ L GRT++A+
Sbjct: 199 LVPNAFTYSFLLEAAYKERGVHEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
Query: 492 EVLDDLFRDGRFNPNASSYN 551
DL G F PN SYN
Sbjct: 259 RFFRDLPSKG-FEPNVVSYN 277
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/168 (27%), Positives = 83/168 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN L LC G + ++ I+ L K Y ++ + ++ +A +LL
Sbjct: 377 NEGTYNGLAM-LCEVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E +EEA+ +F + + P+V ++N LL LC
Sbjct: 436 YEMTTYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + E+ M+ + P+ TY IL+ +A + + EVL +L
Sbjct: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Frame = +3
Query: 138 EAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFN 317
+ +++ +++A L+ +++KG P++V +L LC +++++AI++ + + G
Sbjct: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
Query: 318 PNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEV 497
P+ SY L+ LC + A +L+ +M + VTYN L+ L G +Q+L+
Sbjct: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
Query: 498 LDDLFRDGRFNPNASSYN 551
LD L + G PNA +Y+
Sbjct: 191 LDRLIQKG-LVPNAFTYS 207
>ref|XP_006478018.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Citrus sinensis]
Length = 568
Score = 298 bits (763), Expect = 6e-79
Identities = 146/185 (78%), Positives = 166/185 (89%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNLN+SLQF++RL+QKGLVPNA+TYS LLEAAYKERGV A +L
Sbjct: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R EEAIR FR+LP+KGF PNVVSYNILLRSLC
Sbjct: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRNLPSKGFEPNVVSYNILLRSLCM 285
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM G DRSP++VTYNILIGSLA+HG+TD AL+VLD++ + GRF P+A+
Sbjct: 286 EGRWEEANELLAEMDGGDRSPTVVTYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAA 344
Query: 543 SYNPI 557
SYNPI
Sbjct: 345 SYNPI 349
Score = 80.1 bits (196), Expect = 3e-13
Identities = 49/181 (27%), Positives = 89/181 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
+ +YN ++ LC G ++ ++ ++++ + PN TY+ L + V EA ++
Sbjct: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK-VQEAFAII 400
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
+ K + Y ++T LC + + +A +L ++ GF P+ +Y+ L+R LC E
Sbjct: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASS 545
EEA E+ M D P + +N L+ L RTD +LEV + G+ PN ++
Sbjct: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETT 519
Query: 546 Y 548
Y
Sbjct: 520 Y 520
Score = 73.9 bits (180), Expect = 2e-11
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 35/200 (17%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + +ER++ KG P+ + LL K + +A ++++ +++ G P+ SY
Sbjct: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------- 359
++ LC + V A++L + G+ N V+YN L+R LC
Sbjct: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
Query: 360 -----------YEARWEE-----ANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQAL 491
EA ++E A +LL +++ P++V+YN+L+ L GRT++A+
Sbjct: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
Query: 492 EVLDDLFRDGRFNPNASSYN 551
+L G F PN SYN
Sbjct: 259 RFFRNLPSKG-FEPNVVSYN 277
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/168 (27%), Positives = 83/168 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN L LC G + ++ I+ L K Y ++ + ++ +A +LL
Sbjct: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E +EEA+ +F + + P+V ++N LL LC
Sbjct: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + E+ M+ + P+ TY IL+ +A + + EVL +L
Sbjct: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Frame = +3
Query: 138 EAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFN 317
+ +++ +++A L+ +++KG P++V +L LC +++++AI++ + + G
Sbjct: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
Query: 318 PNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEV 497
P+ SY L+ LC + A +L+ +M + VTYN L+ L G +Q+L+
Sbjct: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
Query: 498 LDDLFRDGRFNPNASSYN 551
LD L + G PNA +Y+
Sbjct: 191 LDRLIQKG-LVPNAFTYS 207
>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 567
Score = 298 bits (762), Expect = 8e-79
Identities = 146/184 (79%), Positives = 168/184 (91%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
NTVTYN+LV+GLC+ GNLNKSLQF++RLMQKGLVPNA+TYS LLEAAYKERGV+EA RLL
Sbjct: 166 NTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLL 225
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D+IIAKGG PNLVSYNV+LTGLC E R+EEAIRLF++LP+KGF+PNVVSYNILLRSLCYE
Sbjct: 226 DEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYE 285
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASS 545
RWEEANELLAEM G +RSPSIVTYNILIGSLAFHG+ +QAL+V+D++ G F P A+S
Sbjct: 286 GRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMM-GPFKPTATS 344
Query: 546 YNPI 557
YNPI
Sbjct: 345 YNPI 348
Score = 79.7 bits (195), Expect = 4e-13
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Frame = +3
Query: 12 VTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDD 191
VTYN L+ L G + ++LQ I+ +M P A +Y+ ++ KE V+ LD
Sbjct: 308 VTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQ 367
Query: 192 IIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAK--------------------- 308
+I +PN ++N I LC E +V+EA L + L K
Sbjct: 368 MIFGRCSPNEGTFNAIAV-LCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGN 426
Query: 309 --------------GFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNI 446
GF P+ +Y+ L+R LC E EA E+ + D P I +N
Sbjct: 427 TYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNA 486
Query: 447 LIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
LI RTD +LEV + + G + P+ ++Y
Sbjct: 487 LILGFCKSHRTDLSLEVFEMMIEKG-YTPSETTY 519
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/136 (28%), Positives = 71/136 (52%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
++ + +A L+ I+ G P++V +L LC +++++AIR+ + + G P+
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ LC A +L+ +M + VTYN L+ L HG +++L+ LD L
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193
Query: 510 FRDGRFNPNASSYNPI 557
+ G PNA +Y+ +
Sbjct: 194 MQKG-LVPNAFTYSSL 208
Score = 70.1 bits (170), Expect = 3e-10
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E +++ G P+ + LL K + +A R+++ +I+ G P+ SY ++ LC
Sbjct: 85 LEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCK 144
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC-------------------------- 359
V A++L + G+ N V+YN L++ LC
Sbjct: 145 RGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFT 204
Query: 360 --------YEARW-EEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
Y+ R EA LL E++ P++V+YN+L+ L GR ++A+ + +L
Sbjct: 205 YSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLP 264
Query: 513 RDGRFNPNASSYN 551
G F+PN SYN
Sbjct: 265 SKG-FSPNVVSYN 276
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/129 (26%), Positives = 64/129 (49%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y +V LC GN + + + + G P++YTYS L+ E + EA + +
Sbjct: 414 YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P++ ++N ++ G C R + ++ +F + KG+ P+ +Y IL+ + +E E
Sbjct: 474 EDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKE 533
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 534 LAAEVLREL 542
Score = 62.8 bits (151), Expect = 5e-08
Identities = 43/168 (25%), Positives = 79/168 (47%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N T+N++ LC G + ++ I+ L K Y ++ K+ A LL
Sbjct: 376 NEGTFNAIAV-LCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E + EA+ +F+ L + P++ ++N L+ C
Sbjct: 435 YEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKS 494
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + E+ M+ +PS TY IL+ + + A EVL +L
Sbjct: 495 HRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLREL 542
>ref|XP_004243988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Solanum lycopersicum]
Length = 577
Score = 295 bits (756), Expect = 4e-78
Identities = 141/185 (76%), Positives = 167/185 (90%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSL+RGLC+ GNLNKSLQF+E+L+QKGLVPNAYTYSILLEA+YKE+GV+EA L
Sbjct: 173 TNTVTYNSLIRGLCMRGNLNKSLQFVEKLIQKGLVPNAYTYSILLEASYKEKGVNEAMLL 232
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E R++EA + FR+LP+KGFNPNVVSYNILLRSLC+
Sbjct: 233 LDNIIAKGGKPNLVSYNVLLTGLCKEGRIDEAKQFFRNLPSKGFNPNVVSYNILLRSLCF 292
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANE LAEMVG+DRSPSIVTYNILI SLA HG+TD A+++LD+++ +F P A+
Sbjct: 293 EGRWEEANEFLAEMVGEDRSPSIVTYNILISSLALHGQTDHAIKILDEMYFGEQFKPIAA 352
Query: 543 SYNPI 557
SYNPI
Sbjct: 353 SYNPI 357
Score = 77.4 bits (189), Expect = 2e-12
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Frame = +3
Query: 15 TYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERG-VDEAKRLLDD 191
+YN ++ LC ++ ++ +++++++ PN TY+ + A + G V EA +L
Sbjct: 353 SYNPIIARLCKDRKVDAVIKCLDQMLERHCSPNEGTYNSI--AVLCDEGLVHEAFSILQA 410
Query: 192 IIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEAR 371
+ K + + Y +++GLC + A +L D+ A GF P+ +Y+ L+R LC E
Sbjct: 411 LRIKQSSSSHDFYRAVISGLCRKGNTFAAFQLLYDMTAHGFTPDSYTYSSLIRGLCLEKM 470
Query: 372 WEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
A ++ M + P + +N L+ L RTD +L+V +D+ G + PN +Y
Sbjct: 471 LVAAVDVFYMMEENGYRPDVDNFNALVLGLCKSKRTDLSLKVFEDMISKG-YMPNEITYT 529
Query: 552 PI 557
I
Sbjct: 530 II 531
Score = 76.6 bits (187), Expect = 4e-12
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N V+YN L+R LC G ++ +F+ ++ + P+ TY+IL+ + D A ++L
Sbjct: 279 NVVSYNILLRSLCFEGRWEEANEFLAEMVGEDRSPSIVTYNILISSLALHGQTDHAIKIL 338
Query: 186 DDI-IAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
D++ + P SYN I+ LC + +V+ I+ + + +PN +YN + LC
Sbjct: 339 DEMYFGEQFKPIAASYNPIIARLCKDRKVDAVIKCLDQMLERHCSPNEGTYN-SIAVLCD 397
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E EA +L + S S Y +I L G T A ++L D+ G F P++
Sbjct: 398 EGLVHEAFSILQALRIKQSSSSHDFYRAVISGLCRKGNTFAAFQLLYDMTAHG-FTPDSY 456
Query: 543 SYNPI 557
+Y+ +
Sbjct: 457 TYSSL 461
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/129 (27%), Positives = 72/129 (55%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y +++ GLC GN + Q + + G P++YTYS L+ E+ + A + +
Sbjct: 423 YRAVISGLCRKGNTFAAFQLLYDMTAHGFTPDSYTYSSLIRGLCLEKMLVAAVDVFYMME 482
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
G P++ ++N ++ GLC R + ++++F D+ +KG+ PN ++Y I++ + +E E
Sbjct: 483 ENGYRPDVDNFNALVLGLCKSKRTDLSLKVFEDMISKGYMPNEITYTIIVEGIIHEDHKE 542
Query: 378 EANELLAEM 404
A+ +L E+
Sbjct: 543 LASVVLREL 551
Score = 69.3 bits (168), Expect = 6e-10
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 35/194 (18%)
Frame = +3
Query: 75 FIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLC 254
++E ++ KG P+ + LL + +A R+++ +++ G P+ SY ++ LC
Sbjct: 92 YLEYMVGKGQKPDKTHATQLLYDLCNCNKLRKAARVMEMMVSSGTIPDAASYTFLVNNLC 151
Query: 255 NEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------------- 359
V A++L + G+ N V+YN L+R LC
Sbjct: 152 KRGNVGHAMQLVDKMEEYGYPTNTVTYNSLIRGLCMRGNLNKSLQFVEKLIQKGLVPNAY 211
Query: 360 -----YEARWEE--ANE---LLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
EA ++E NE LL ++ P++V+YN+L+ L GR D+A + +L
Sbjct: 212 TYSILLEASYKEKGVNEAMLLLDNIIAKGGKPNLVSYNVLLTGLCKEGRIDEAKQFFRNL 271
Query: 510 FRDGRFNPNASSYN 551
G FNPN SYN
Sbjct: 272 PSKG-FNPNVVSYN 284
Score = 68.6 bits (166), Expect = 1e-09
Identities = 43/170 (25%), Positives = 84/170 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYNS+ LC G ++++ ++ L K + Y ++ ++ A +LL
Sbjct: 385 NEGTYNSIAV-LCDEGLVHEAFSILQALRIKQSSSSHDFYRAVISGLCRKGNTFAAFQLL 443
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D+ A G P+ +Y+ ++ GLC E + A+ +F + G+ P+V ++N L+ LC
Sbjct: 444 YDMTAHGFTPDSYTYSSLIRGLCLEKMLVAAVDVFYMMEENGYRPDVDNFNALVLGLCKS 503
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFR 515
R + + ++ +M+ P+ +TY I++ + + A VL +L R
Sbjct: 504 KRTDLSLKVFEDMISKGYMPNEITYTIIVEGIIHEDHKELASVVLRELHR 553
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/134 (28%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE + +A L+ ++ KG P+ +L LCN +++ +A R+ + + G P+
Sbjct: 82 KELRLYDAFLYLEYMVGKGQKPDKTHATQLLYDLCNCNKLRKAARVMEMMVSSGTIPDAA 141
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ +LC A +L+ +M + VTYN LI L G +++L+ ++ L
Sbjct: 142 SYTFLVNNLCKRGNVGHAMQLVDKMEEYGYPTNTVTYNSLIRGLCMRGNLNKSLQFVEKL 201
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 202 IQKG-LVPNAYTYS 214
Score = 60.1 bits (144), Expect = 4e-07
Identities = 34/115 (29%), Positives = 64/115 (55%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
++ TY+SL+RGLC+ L ++ + + G P+ ++ L+ K + D + ++
Sbjct: 454 DSYTYSSLIRGLCLEKMLVAAVDVFYMMEENGYRPDVDNFNALVLGLCKSKRTDLSLKVF 513
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLR 350
+D+I+KG PN ++Y +I+ G+ +ED E A + R+L K V+S N + R
Sbjct: 514 EDMISKGYMPNEITYTIIVEGIIHEDHKELASVVLRELHRK----EVISRNTVER 564
>ref|XP_006346048.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Solanum tuberosum]
Length = 577
Score = 294 bits (753), Expect = 9e-78
Identities = 140/185 (75%), Positives = 167/185 (90%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSL+RGLC+ GNLNKSLQF+E+L+QKGLVPNAYTYSILLEA+YKE+GV+EA L
Sbjct: 173 TNTVTYNSLIRGLCMRGNLNKSLQFVEKLIQKGLVPNAYTYSILLEASYKEKGVNEAMLL 232
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E R++EA + FR+LP+KGFNPNVVSYNILLRSLC+
Sbjct: 233 LDNIIAKGGKPNLVSYNVLLTGLCKEGRIDEAKQFFRNLPSKGFNPNVVSYNILLRSLCF 292
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANE LAEMVG+DRSPSIVTYNILI SLA HG+ D A+++LD+++ + +F P A+
Sbjct: 293 EGRWEEANEFLAEMVGEDRSPSIVTYNILISSLALHGQPDHAIKILDEMYFEEQFKPIAA 352
Query: 543 SYNPI 557
SYNPI
Sbjct: 353 SYNPI 357
Score = 76.6 bits (187), Expect = 4e-12
Identities = 37/129 (28%), Positives = 72/129 (55%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y +++ GLC GN + Q + + G P++YTYS L+ E+ + A + +
Sbjct: 423 YGAVISGLCRKGNTFAAFQLLYDMTAHGFTPDSYTYSSLIRGLCLEKMLVAAVDVFYMME 482
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
G P++ ++N ++ GLC R + ++++F D+ +KG+ PN ++Y IL+ + +E E
Sbjct: 483 ENGYRPDVDNFNALVLGLCKSKRTDLSLKVFEDMISKGYMPNEITYTILVEGIIHEDHKE 542
Query: 378 EANELLAEM 404
A+ +L E+
Sbjct: 543 LASVVLKEL 551
Score = 75.9 bits (185), Expect = 6e-12
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Frame = +3
Query: 12 VTYNSLVRGLCICGNLNKSLQFIERL-MQKGLVPNAYTYSILLEAAYKERGVDEAKRLLD 188
VTYN L+ L + G + +++ ++ + ++ P A +Y+ ++ K+R VD + LD
Sbjct: 316 VTYNILISSLALHGQPDHAIKILDEMYFEEQFKPIAASYNPIIARLCKDRKVDAVIKCLD 375
Query: 189 DIIAKGGNPNLVSYN----------------------------------VILTGLCNEDR 266
++ + +PN +YN +++GLC +
Sbjct: 376 QMLERHCSPNEGTYNSIAVLCDEGLVHEAFSILQALRIKQSFSSHDFYGAVISGLCRKGN 435
Query: 267 VEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNI 446
A +L D+ A GF P+ +Y+ L+R LC E A ++ M + P + +N
Sbjct: 436 TFAAFQLLYDMTAHGFTPDSYTYSSLIRGLCLEKMLVAAVDVFYMMEENGYRPDVDNFNA 495
Query: 447 LIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
L+ L RTD +L+V +D+ G + PN +Y
Sbjct: 496 LVLGLCKSKRTDLSLKVFEDMISKG-YMPNEITY 528
Score = 73.6 bits (179), Expect = 3e-11
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N V+YN L+ GLC G ++++ QF L KG PN +Y+ILL + E +EA L
Sbjct: 244 NLVSYNVLLTGLCKEGRIDEAKQFFRNLPSKGFNPNVVSYNILLRSLCFEGRWEEANEFL 303
Query: 186 DDIIAKGGNPNLVSYNV------------------------------------ILTGLCN 257
+++ + +P++V+YN+ I+ LC
Sbjct: 304 AEMVGEDRSPSIVTYNILISSLALHGQPDHAIKILDEMYFEEQFKPIAASYNPIIARLCK 363
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVT 437
+ +V+ I+ + + +PN +YN + LC E EA +L + S
Sbjct: 364 DRKVDAVIKCLDQMLERHCSPNEGTYN-SIAVLCDEGLVHEAFSILQALRIKQSFSSHDF 422
Query: 438 YNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYNPI 557
Y +I L G T A ++L D+ G F P++ +Y+ +
Sbjct: 423 YGAVISGLCRKGNTFAAFQLLYDMTAHG-FTPDSYTYSSL 461
Score = 70.5 bits (171), Expect = 3e-10
Identities = 44/170 (25%), Positives = 84/170 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYNS+ LC G ++++ ++ L K + Y ++ ++ A +LL
Sbjct: 385 NEGTYNSIAV-LCDEGLVHEAFSILQALRIKQSFSSHDFYGAVISGLCRKGNTFAAFQLL 443
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D+ A G P+ +Y+ ++ GLC E + A+ +F + G+ P+V ++N L+ LC
Sbjct: 444 YDMTAHGFTPDSYTYSSLIRGLCLEKMLVAAVDVFYMMEENGYRPDVDNFNALVLGLCKS 503
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFR 515
R + + ++ +M+ P+ +TY IL+ + + A VL +L R
Sbjct: 504 KRTDLSLKVFEDMISKGYMPNEITYTILVEGIIHEDHKELASVVLKELHR 553
Score = 69.3 bits (168), Expect = 6e-10
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 35/194 (18%)
Frame = +3
Query: 75 FIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLC 254
++E ++ KG P+ + LL + +A R+++ +++ G P+ SY ++ LC
Sbjct: 92 YLEYMVGKGQKPDKTHATQLLYDLCNCNKLRKAARVMEMMVSSGTIPDAASYTFLVNNLC 151
Query: 255 NEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------------- 359
V A++L + G+ N V+YN L+R LC
Sbjct: 152 KRGNVGHAMQLVDKMEEYGYPTNTVTYNSLIRGLCMRGNLNKSLQFVEKLIQKGLVPNAY 211
Query: 360 -----YEARWEE--ANE---LLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
EA ++E NE LL ++ P++V+YN+L+ L GR D+A + +L
Sbjct: 212 TYSILLEASYKEKGVNEAMLLLDNIIAKGGKPNLVSYNVLLTGLCKEGRIDEAKQFFRNL 271
Query: 510 FRDGRFNPNASSYN 551
G FNPN SYN
Sbjct: 272 PSKG-FNPNVVSYN 284
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/134 (28%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE + +A L+ ++ KG P+ +L LCN +++ +A R+ + + G P+
Sbjct: 82 KELRLYDAFLYLEYMVGKGQKPDKTHATQLLYDLCNCNKLRKAARVMEMMVSSGTIPDAA 141
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ +LC A +L+ +M + VTYN LI L G +++L+ ++ L
Sbjct: 142 SYTFLVNNLCKRGNVGHAMQLVDKMEEYGYPTNTVTYNSLIRGLCMRGNLNKSLQFVEKL 201
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 202 IQKG-LVPNAYTYS 214
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/115 (27%), Positives = 64/115 (55%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
++ TY+SL+RGLC+ L ++ + + G P+ ++ L+ K + D + ++
Sbjct: 454 DSYTYSSLIRGLCLEKMLVAAVDVFYMMEENGYRPDVDNFNALVLGLCKSKRTDLSLKVF 513
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLR 350
+D+I+KG PN ++Y +++ G+ +ED E A + ++L K V+S N + R
Sbjct: 514 EDMISKGYMPNEITYTILVEGIIHEDHKELASVVLKELHRK----EVISRNTVER 564
>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 294 bits (752), Expect = 1e-77
Identities = 146/185 (78%), Positives = 163/185 (88%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNL +SLQ ++RL+QKGLVPNAYTYS LLEAAYKERG DEA +L
Sbjct: 165 TNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E R E+AIRLFR+LP+KGF+PNVVSYNILLRSLC
Sbjct: 225 LDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCN 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN LLAEM GD+RSPS VTYNILIGSLA HGRT+ ALEVL+++ R RF P AS
Sbjct: 285 EGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIR-ARFKPTAS 343
Query: 543 SYNPI 557
SYNPI
Sbjct: 344 SYNPI 348
Score = 88.6 bits (218), Expect = 9e-16
Identities = 54/184 (29%), Positives = 94/184 (51%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
+TVTYN L+ L + G +L+ +E +++ P A +Y+ ++ K+ +D + L
Sbjct: 306 STVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCL 365
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D ++ + NPN +YN I T LC E V+EA + + L K + Y I++ SLC +
Sbjct: 366 DQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRK 424
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASS 545
A +LL EM +P TY+ LI L G ++A+E+ + + + P+ +
Sbjct: 425 GNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNK--PDTEN 482
Query: 546 YNPI 557
YN +
Sbjct: 483 YNSL 486
Score = 75.1 bits (183), Expect = 1e-11
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 35/193 (18%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E +++KG P+ + + LL K + +A ++++ +I G P+ SY +++ LC
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCR 144
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC-------------------------- 359
+ V A++L + G+ N V+YN L+R LC
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 360 --------YEARW-EEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
Y+ R +EA++LL E++ P++V+YN+L+ L GRT+ A+ + +L
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264
Query: 513 RDGRFNPNASSYN 551
G F+PN SYN
Sbjct: 265 SKG-FSPNVVSYN 276
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/129 (26%), Positives = 67/129 (51%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + + + G P+++TYS L+ E ++EA + ++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VM 472
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
+ P+ +YN ++ G C R + A+ +F + KG+ PN +Y IL+ + +E +
Sbjct: 473 EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMD 532
Query: 378 EANELLAEM 404
A ++L E+
Sbjct: 533 LATKVLREL 541
Score = 67.0 bits (162), Expect = 3e-09
Identities = 42/139 (30%), Positives = 71/139 (51%)
Frame = +3
Query: 135 LEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGF 314
+E KE + +A L+ ++ KG P++ +L LC ++ +AI++ + G
Sbjct: 69 VEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGI 128
Query: 315 NPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALE 494
P+ SY L+ SLC + A +L+ +M + VTYN L+ L HG Q+L+
Sbjct: 129 IPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQ 188
Query: 495 VLDDLFRDGRFNPNASSYN 551
+LD L + G PNA +Y+
Sbjct: 189 LLDRLIQKG-LVPNAYTYS 206
Score = 66.2 bits (160), Expect = 5e-09
Identities = 46/168 (27%), Positives = 79/168 (47%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN++ LC G + ++ I+ L K Y I++ + ++ A +LL
Sbjct: 376 NEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E + EAI +F + P+ +YN L+ C
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKS 493
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + A ++ MVG P+ TY IL+ + D A +VL +L
Sbjct: 494 RRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541
>gb|EOY13804.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 568
Score = 293 bits (750), Expect = 2e-77
Identities = 142/185 (76%), Positives = 167/185 (90%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNLN+SLQ +++L+Q+GLVPNA+TYS LLEAAYKE+GV+EA +L
Sbjct: 165 TNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R +EAIR FR+LPAKGF+PNVVSYNILLR+LCY
Sbjct: 225 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCY 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E +W+EANELLAEM G+DRSPS+VTYNILIGSLA HGRT+ AL+VLD++ R GRF A+
Sbjct: 285 EGQWKEANELLAEMDGEDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIR-GRFKATAT 343
Query: 543 SYNPI 557
SYNPI
Sbjct: 344 SYNPI 348
Score = 79.3 bits (194), Expect = 6e-13
Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +3
Query: 15 TYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERG-VDEAKRLLDD 191
+YN ++ LC ++ ++ +++++ + PN TY+ A E+G V EA ++
Sbjct: 344 SYNPIIARLCQEKKVDLVVKCLDQMIYRRCKPNEGTYNAT--AVLCEQGMVQEAFSIIQS 401
Query: 192 IIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEAR 371
+ +K +P+ Y +++ LC + A +L ++ GFNP+ +Y+ L+R LC E
Sbjct: 402 LGSKQSSPSHDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGM 461
Query: 372 WEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
+EA E++ M + P + +N LI RTD +L+V + + G + PN ++Y
Sbjct: 462 LQEALEIVIVMEESNYRPDVDNFNALILGFCKSHRTDLSLKVFEMIIEKG-YMPNETTY 519
Score = 77.0 bits (188), Expect = 3e-12
Identities = 46/165 (27%), Positives = 84/165 (50%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + +E ++ KG P+ + LL K + ++ R+L+ ++ G P+ SY
Sbjct: 78 LNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAASYTF 137
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDD 416
++ LC V A++L + A G+ N V+YN L+R LC ++ +LL +++
Sbjct: 138 LVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRG 197
Query: 417 RSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
P+ TY+ L+ + ++A+++LDD+ G PN SYN
Sbjct: 198 LVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGG-KPNLVSYN 241
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/129 (27%), Positives = 69/129 (53%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y S++ LC GN + Q + + + G P++YTYS L+ E + EA ++ +
Sbjct: 414 YKSVISSLCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVME 473
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P++ ++N ++ G C R + ++++F + KG+ PN +Y IL+ + +E + E
Sbjct: 474 ESNYRPDVDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIE 533
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 534 LAAEVLKEL 542
Score = 71.2 bits (173), Expect = 2e-10
Identities = 43/168 (25%), Positives = 84/168 (50%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN+ LC G + ++ I+ L K P+ Y ++ + ++ A +LL
Sbjct: 376 NEGTYNATAV-LCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISSLCRKGNTYPAFQLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G NP+ +Y+ ++ GLC E ++EA+ + + + P+V ++N L+ C
Sbjct: 435 YEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPDVDNFNALILGFCKS 494
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + ++ ++ P+ TY IL+ +A G+ + A EVL +L
Sbjct: 495 HRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLKEL 542
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/134 (28%), Positives = 71/134 (52%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
+E +++A ++ ++ KG P++ +L LC ++++++IR+ + G P+
Sbjct: 74 RELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAA 133
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ LC A +L+ +M + VTYN L+ L HG +Q+L++LD L
Sbjct: 134 SYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 193
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 194 IQRG-LVPNAFTYS 206
>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 288 bits (737), Expect = 6e-76
Identities = 142/185 (76%), Positives = 161/185 (87%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNT TYNSLVRGLC+ GNL +SLQ ++RL+QKGLVPNAYTYS LLEAAYKERG DEA +L
Sbjct: 165 TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E R E+A++LFR+LP+KGF+PNVVSYNILLRSLC
Sbjct: 225 LDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCN 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN LLAEM GD+RSPS VTYNILIGSL HGRT+ ALEVL+++ R RF P AS
Sbjct: 285 EGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR-ARFKPTAS 343
Query: 543 SYNPI 557
SYNPI
Sbjct: 344 SYNPI 348
Score = 102 bits (255), Expect = 5e-20
Identities = 54/175 (30%), Positives = 101/175 (57%)
Frame = +3
Query: 27 LVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKG 206
L+ LC + K+++ +E ++ G++P+A +Y+ L+ + ++ V A +L+D + G
Sbjct: 103 LLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 207 GNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEAN 386
N +YN ++ GLC + ++++L L KG PN +Y+ LL + E +EA+
Sbjct: 163 YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 387 ELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
+LL E++ P++V+YN+L+ L GRT+ A+++ +L G F+PN SYN
Sbjct: 223 KLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG-FSPNVVSYN 276
Score = 87.4 bits (215), Expect = 2e-15
Identities = 53/164 (32%), Positives = 85/164 (51%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
+TVTYN L+ L + G +L+ +E +++ P A +Y+ ++ K+R VD + L
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCL 365
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D ++ + NPN +YN I T LC E V+EA + + L K Y I++ SLC +
Sbjct: 366 DQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRK 424
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEV 497
A +LL EM +P TY+ LI L G ++A+E+
Sbjct: 425 GNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEI 468
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/139 (29%), Positives = 71/139 (51%)
Frame = +3
Query: 135 LEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGF 314
L+ KE +++A L+ ++ KG P++ +L LC ++ +AI++ + G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 315 NPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALE 494
P+ SY L+ SLC + A +L+ +M + TYN L+ L HG Q+L+
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 495 VLDDLFRDGRFNPNASSYN 551
+LD L + G PNA +Y+
Sbjct: 189 LLDRLIQKG-LVPNAYTYS 206
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/129 (25%), Positives = 65/129 (50%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + + + G P+++TYS L+ E ++EA + ++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VM 472
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
+ + +YN ++ G C R + A+ +F + KG+ N +Y IL+ + +E +
Sbjct: 473 EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMD 532
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 533 LATEVLREL 541
>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 288 bits (737), Expect = 6e-76
Identities = 142/185 (76%), Positives = 161/185 (87%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNT TYNSLVRGLC+ GNL +SLQ ++RL+QKGLVPNAYTYS LLEAAYKERG DEA +L
Sbjct: 165 TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E R E+A++LFR+LP+KGF+PNVVSYNILLRSLC
Sbjct: 225 LDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCN 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN LLAEM GD+RSPS VTYNILIGSL HGRT+ ALEVL+++ R RF P AS
Sbjct: 285 EGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR-ARFKPTAS 343
Query: 543 SYNPI 557
SYNPI
Sbjct: 344 SYNPI 348
Score = 102 bits (255), Expect = 5e-20
Identities = 54/175 (30%), Positives = 101/175 (57%)
Frame = +3
Query: 27 LVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKG 206
L+ LC + K+++ +E ++ G++P+A +Y+ L+ + ++ V A +L+D + G
Sbjct: 103 LLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 207 GNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEAN 386
N +YN ++ GLC + ++++L L KG PN +Y+ LL + E +EA+
Sbjct: 163 YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 387 ELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
+LL E++ P++V+YN+L+ L GRT+ A+++ +L G F+PN SYN
Sbjct: 223 KLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG-FSPNVVSYN 276
Score = 87.4 bits (215), Expect = 2e-15
Identities = 53/164 (32%), Positives = 85/164 (51%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
+TVTYN L+ L + G +L+ +E +++ P A +Y+ ++ K+R VD + L
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCL 365
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
D ++ + NPN +YN I T LC E V+EA + + L K Y I++ SLC +
Sbjct: 366 DQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRK 424
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEV 497
A +LL EM +P TY+ LI L G ++A+E+
Sbjct: 425 GNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEI 468
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/139 (29%), Positives = 71/139 (51%)
Frame = +3
Query: 135 LEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGF 314
L+ KE +++A L+ ++ KG P++ +L LC ++ +AI++ + G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 315 NPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALE 494
P+ SY L+ SLC + A +L+ +M + TYN L+ L HG Q+L+
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 495 VLDDLFRDGRFNPNASSYN 551
+LD L + G PNA +Y+
Sbjct: 189 LLDRLIQKG-LVPNAYTYS 206
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/129 (25%), Positives = 65/129 (50%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + + + G P+++TYS L+ E ++EA + ++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VM 472
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
+ + +YN ++ G C R + A+ +F + KG+ N +Y IL+ + +E +
Sbjct: 473 EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMD 532
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 533 LATEVLREL 541
>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein
VITISV_038804 [Vitis vinifera]
Length = 567
Score = 286 bits (733), Expect = 2e-75
Identities = 141/185 (76%), Positives = 162/185 (87%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNL++SLQ +++ M+KGLVPN +TYS LLEAAYKERG DEA RL
Sbjct: 165 TNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+I+AKGG PNLVSYNV+LTGLC E R EEA++ FRDLP+KGF+PNVVSYNILLRSLCY
Sbjct: 225 LDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCY 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWE+A ELLAEM G +RSPSIVT+NILIGSLA HG+TDQALEVLDD+ R RF A+
Sbjct: 285 EGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSR-ARFKATAA 343
Query: 543 SYNPI 557
SYNPI
Sbjct: 344 SYNPI 348
Score = 76.3 bits (186), Expect = 5e-12
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 35/200 (17%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + ++E ++ KG P+ + L+ K + +A ++++ +I G P+ S
Sbjct: 78 LNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTF 137
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------- 359
++ LC V A++L + G+ N V+YN L+R LC
Sbjct: 138 LVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197
Query: 360 ---------------YEARW-EEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQAL 491
Y+ R +EA LL E+V P++V+YN+L+ L GRT++A+
Sbjct: 198 LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257
Query: 492 EVLDDLFRDGRFNPNASSYN 551
+ DL G F+PN SYN
Sbjct: 258 QFFRDLPSKG-FSPNVVSYN 276
Score = 73.6 bits (179), Expect = 3e-11
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Frame = +3
Query: 12 VTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDD 191
VT+N L+ L + G +++L+ ++ + + A +Y+ ++ KE VD + LD
Sbjct: 308 VTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQ 367
Query: 192 IIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAK--------------------- 308
++ + NPN +YN I LC E +V+EA + + L K
Sbjct: 368 MMYRRCNPNEGTYNAIAV-LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGN 426
Query: 309 --------------GFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNI 446
GF P+ +Y+ L+R LC E +EA E+ + M + P + +N
Sbjct: 427 TYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNA 486
Query: 447 LIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYNPI 557
LI L +TD +L V + + + G + PN ++Y I
Sbjct: 487 LILGLCKCRKTDLSLMVFEMMVKKG-YMPNETTYTII 522
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/129 (26%), Positives = 67/129 (51%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + + + G VP++YTYS L+ E +DEA + +
Sbjct: 414 YKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIME 473
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P++ ++N ++ GLC + + ++ +F + KG+ PN +Y I++ + ++ E
Sbjct: 474 ENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEME 533
Query: 378 EANELLAEM 404
A +L E+
Sbjct: 534 LAAAVLKEL 542
Score = 59.7 bits (143), Expect = 5e-07
Identities = 41/169 (24%), Positives = 81/169 (47%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN++ LC G + ++ I+ L K Y ++ + ++ A +LL
Sbjct: 376 NEGTYNAIAV-LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC+E ++EA+ +F + P+V ++N L+ LC
Sbjct: 435 YEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKC 494
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
+ + + + MV P+ TY I++ +A + A VL +L+
Sbjct: 495 RKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELY 543
>ref|XP_002317023.2| hypothetical protein POPTR_0011s14750g [Populus trichocarpa]
gi|550328410|gb|EEE97635.2| hypothetical protein
POPTR_0011s14750g [Populus trichocarpa]
Length = 567
Score = 285 bits (728), Expect = 7e-75
Identities = 139/185 (75%), Positives = 162/185 (87%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC+ GNLN+SLQ +++LM KGLVPN +TYS LLEAAYKERGV+EA +L
Sbjct: 165 TNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKG PNLVSYNV+LTGLC E R EEAIR FRDLP+KGFNPNVVSYNI+LRSLC+
Sbjct: 225 LDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCH 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN+LLAEM ++RSPS+VTYNILIGSLAFHGR + A EVLD++ R F P+A+
Sbjct: 285 EGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVR-ASFKPSAT 343
Query: 543 SYNPI 557
+YNPI
Sbjct: 344 TYNPI 348
Score = 81.3 bits (199), Expect = 1e-13
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Frame = +3
Query: 12 VTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDD 191
VTYN L+ L G + + + ++ +++ P+A TY+ ++ KE +D + LD
Sbjct: 308 VTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQ 367
Query: 192 IIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAK--------------------- 308
+I NPN ++N I LC + RV EA + ++L K
Sbjct: 368 MIHHRCNPNEGTFNAIAV-LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGN 426
Query: 309 --------------GFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNI 446
GF P+ +Y+ L+R LC E +EA E+ + +D P + +N
Sbjct: 427 TYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNA 486
Query: 447 LIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYNPI 557
LI GRTD +L++ + + G + PN ++Y I
Sbjct: 487 LILGFCKSGRTDLSLDIFEMMVEKG-YTPNETTYTII 522
Score = 80.9 bits (198), Expect = 2e-13
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + +E ++ KG P+ + LL K + +A R+++ +I G P+ SY
Sbjct: 78 LNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTF 137
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEAR------------WE- 377
++ LC + A++L + G+ N V+YN L+R LC W+
Sbjct: 138 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 197
Query: 378 ----------------------EANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQAL 491
EA +LL E++ P++V+YN+L+ L GRT++A+
Sbjct: 198 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAI 257
Query: 492 EVLDDLFRDGRFNPNASSYNPI 557
DL G FNPN SYN I
Sbjct: 258 RFFRDLPSKG-FNPNVVSYNII 278
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/130 (28%), Positives = 66/130 (50%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + + + G VP+ YTYS L+ E +DEA + +
Sbjct: 414 YKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLE 473
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P L ++N ++ G C R + ++ +F + KG+ PN +Y I++ + +E E
Sbjct: 474 ENDYRPILDNFNALILGFCKSGRTDLSLDIFEMMVEKGYTPNETTYTIIVEGIAHEEEKE 533
Query: 378 EANELLAEMV 407
A E+L E++
Sbjct: 534 LAAEVLKELL 543
Score = 68.6 bits (166), Expect = 1e-09
Identities = 39/134 (29%), Positives = 70/134 (52%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
+E +++A L+ I+ KG P++ +L LC +++++A R+ + G P+
Sbjct: 74 REIRLNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAA 133
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ +LC A +L+ +M + + VTYN L+ L HG +Q+L++LD L
Sbjct: 134 SYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 193
Query: 510 FRDGRFNPNASSYN 551
G PN +Y+
Sbjct: 194 MWKG-LVPNEFTYS 206
Score = 64.3 bits (155), Expect = 2e-08
Identities = 42/168 (25%), Positives = 82/168 (48%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N T+N++ LC G + ++ I+ L K Y ++ + ++ A +LL
Sbjct: 376 NEGTFNAIAV-LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E ++EA+ +FR L + P + ++N L+ C
Sbjct: 435 YEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKS 494
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + ++ MV +P+ TY I++ +A + A EVL +L
Sbjct: 495 GRTDLSLDIFEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKEL 542
>ref|XP_006598186.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 571
Score = 283 bits (723), Expect = 3e-74
Identities = 139/185 (75%), Positives = 163/185 (88%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYN+LV+GLC+ GNLN+SLQ ++RL +KGLVPNA+TYS LLEAAYKERGVDEA L
Sbjct: 167 TNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLVPNAFTYSFLLEAAYKERGVDEAMEL 226
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R EEAI+LFR+LPAKGF+P+VVS+NILLRSLCY
Sbjct: 227 LDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFRELPAKGFSPSVVSFNILLRSLCY 286
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM +D+ PS+VTYNILI SL+ HGRT+QA +VLD++ R G F +A+
Sbjct: 287 EGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLHGRTEQAFKVLDEMTRSG-FKASAT 345
Query: 543 SYNPI 557
SYNPI
Sbjct: 346 SYNPI 350
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/169 (27%), Positives = 86/169 (50%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TY+++ LC G + ++ I+ L K P Y L+ + ++ A ++L
Sbjct: 378 NEGTYSAIAM-LCEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQML 436
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++I G P+ +Y+ ++ G+C E ++EA+ +FR L P++ +YN L+ C
Sbjct: 437 YEMIKYGFTPDSYTYSSLIRGMCREGMLDEALNIFRILEENDHRPDIDNYNALILGFCKA 496
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
R + + E+ MV P+ TY IL+ LAF TD A +++ +L+
Sbjct: 497 QRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELY 545
Score = 75.9 bits (185), Expect = 6e-12
Identities = 47/158 (29%), Positives = 76/158 (48%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E L+ KG P + LL K +A R+++ ++ G P+ SY ++ LC
Sbjct: 87 LEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCK 146
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVT 437
V AI+L + GF N V+YN L++ LC ++ +LL + P+ T
Sbjct: 147 RGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLVPNAFT 206
Query: 438 YNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
Y+ L+ + D+A+E+LDD+ G PN SYN
Sbjct: 207 YSFLLEAAYKERGVDEAMELLDDIIAKGG-EPNLVSYN 243
Score = 69.3 bits (168), Expect = 6e-10
Identities = 41/134 (30%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE + +A L+ ++ KG P + +L LC ++ +A+R+ + G P+
Sbjct: 76 KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ LC A +L+ +M G + VTYN L+ L HG +Q+L++LD L
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 196 TKKG-LVPNAFTYS 208
>gb|EXB79988.1| hypothetical protein L484_004026 [Morus notabilis]
Length = 573
Score = 282 bits (722), Expect = 3e-74
Identities = 139/185 (75%), Positives = 161/185 (87%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNT+TYNSLV+GLC+ GNLN+SLQ +ERLM+KGLVPNA+TYS LLEAAYKERGV+EA +L
Sbjct: 172 TNTMTYNSLVKGLCMRGNLNQSLQLLERLMKKGLVPNAFTYSFLLEAAYKERGVNEAIKL 231
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
L++IIAKGG PNLVSYNV+LTGLC E R +EAIR RDLP GFNPNVVSYNILLRSLC
Sbjct: 232 LEEIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFLRDLPQMGFNPNVVSYNILLRSLCE 291
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN LLAEM G++RSPS+VTYNILIGSLA HG+T ALEV++++ R RF P A+
Sbjct: 292 EGRWEEANVLLAEMDGEERSPSVVTYNILIGSLAHHGKTQHALEVIEEMVR-ARFRPTAA 350
Query: 543 SYNPI 557
SYNPI
Sbjct: 351 SYNPI 355
Score = 106 bits (264), Expect = 4e-21
Identities = 57/175 (32%), Positives = 99/175 (56%)
Frame = +3
Query: 27 LVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKG 206
L+ LC L K+++ +E ++ G++P+A +Y+ L+ + + A +L++ + G
Sbjct: 110 LLYDLCKINKLRKAVRVMETMVGSGIIPDAASYTHLVSNLCRRGNIGHAMQLVEKMDEYG 169
Query: 207 GNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEAN 386
N ++YN ++ GLC + ++++L L KG PN +Y+ LL + E EA
Sbjct: 170 YPTNTMTYNSLVKGLCMRGNLNQSLQLLERLMKKGLVPNAFTYSFLLEAAYKERGVNEAI 229
Query: 387 ELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
+LL E++ P++V+YN+L+ L GRTD+A+ L DL + G FNPN SYN
Sbjct: 230 KLLEEIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFLRDLPQMG-FNPNVVSYN 283
Score = 74.3 bits (181), Expect = 2e-11
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 35/216 (16%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
+ VTYN L+ L G +L+ IE +++ P A +Y+ ++ KE V + L
Sbjct: 313 SVVTYNILIGSLAHHGKTQHALEVIEEMVRARFRPTAASYNPIIVHLCKEGKVGLVVKCL 372
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAK------------------- 308
D ++ + +PN +YN I LC E V+EA + + L K
Sbjct: 373 DQMMYRRCSPNEGTYNAISV-LCGEGMVQEAFSIIQSLGNKQKLSTHEFYKSVISSLCRK 431
Query: 309 ----------------GFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTY 440
GF P+ +Y+ L+R LC E EA E+ M ++ P
Sbjct: 432 GSTYAAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGMLGEAMEIFGIMEENNYRPDTENL 491
Query: 441 NILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
N LI GRTD +LEV + G + PN ++Y
Sbjct: 492 NALILGFCKSGRTDLSLEVFGVMIEKG-YIPNETTY 526
Score = 69.3 bits (168), Expect = 6e-10
Identities = 35/129 (27%), Positives = 64/129 (49%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y S++ LC G+ + Q + + + G P++YTYS L+ E + EA + +
Sbjct: 421 YKSVISSLCRKGSTYAAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGMLGEAMEIFGIME 480
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P+ + N ++ G C R + ++ +F + KG+ PN +Y IL+ + +E E
Sbjct: 481 ENNYRPDTENLNALILGFCKSGRTDLSLEVFGVMIEKGYIPNETTYTILVEGIAHEGEVE 540
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 541 LAAEVLKEL 549
Score = 68.9 bits (167), Expect = 8e-10
Identities = 43/168 (25%), Positives = 80/168 (47%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TYN+ + LC G + ++ I+ L K + Y ++ + ++ A +LL
Sbjct: 383 NEGTYNA-ISVLCGEGMVQEAFSIIQSLGNKQKLSTHEFYKSVISSLCRKGSTYAAFQLL 441
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ GLC E + EA+ +F + + P+ + N L+ C
Sbjct: 442 YEMTKYGFTPDSYTYSSLIRGLCMEGMLGEAMEIFGIMEENNYRPDTENLNALILGFCKS 501
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
R + + E+ M+ P+ TY IL+ +A G + A EVL +L
Sbjct: 502 GRTDLSLEVFGVMIEKGYIPNETTYTILVEGIAHEGEVELAAEVLKEL 549
>ref|XP_006389923.1| hypothetical protein EUTSA_v10018334mg [Eutrema salsugineum]
gi|557086357|gb|ESQ27209.1| hypothetical protein
EUTSA_v10018334mg [Eutrema salsugineum]
Length = 581
Score = 281 bits (720), Expect = 6e-74
Identities = 136/186 (73%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
+NTVTYN+LVRGLC+ G+LN+SLQF+ERLMQKGL PNA+TYS LLEAAYKERG DEA +L
Sbjct: 178 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGADEAVKL 237
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLV+YNV+LTG C E R ++A++LFRDLPAKGF PNVVSYNILLR LC
Sbjct: 238 LDDIIAKGGEPNLVTYNVLLTGFCKEGRTDDAMKLFRDLPAKGFKPNVVSYNILLRCLCC 297
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFR-DGRFNPNA 539
+ RWEEAN LLAEM G DRSPS+VTYNILI SLAFHGRT+QA+EVL+++ + + +F A
Sbjct: 298 DGRWEEANSLLAEMDGGDRSPSVVTYNILINSLAFHGRTEQAMEVLNEMSKGNHQFRVTA 357
Query: 540 SSYNPI 557
+SYNP+
Sbjct: 358 TSYNPV 363
Score = 105 bits (262), Expect = 7e-21
Identities = 58/182 (31%), Positives = 96/182 (52%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N L+ LC L K+++ IE ++ G++P+A Y+ L+ K V A +L+
Sbjct: 109 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 168
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
+ + G N V+YN ++ GLC + ++++ L KG PN +Y+ LL + E
Sbjct: 169 EKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 228
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASS 545
+EA +LL +++ P++VTYN+L+ GRTD A+++ DL G F PN S
Sbjct: 229 RGADEAVKLLDDIIAKGGEPNLVTYNVLLTGFCKEGRTDDAMKLFRDLPAKG-FKPNVVS 287
Query: 546 YN 551
YN
Sbjct: 288 YN 289
Score = 68.2 bits (165), Expect = 1e-09
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 15 TYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDI 194
+YN ++ LC G ++ ++ ++ ++ + PN TY+ + V EA ++ +
Sbjct: 359 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCRPNEGTYNAIGALCEHNNKVQEAFYIIQSL 418
Query: 195 IAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARW 374
K Y ++T LC + A +L ++ GF+P+ +Y+ L+R LC E +
Sbjct: 419 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDSHTYSSLIRGLCLEGMF 478
Query: 375 EEANELLAEMVGDDR-SPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
A E+L+ M + P++ +N +I RTD A+EV + + R PN ++Y
Sbjct: 479 RGAMEVLSIMEESEHYRPTVDNFNAMILGFCKTRRTDLAMEVFEMMVEKKRM-PNETTY 536
Score = 65.1 bits (157), Expect = 1e-08
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKG---LVPNAYTYSILLEAAYKERGVDEAK 176
+ VTYN L+ L G ++++ + M KG A +Y+ ++ KE VD
Sbjct: 319 SVVTYNILINSLAFHGRTEQAMEVLNE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 377
Query: 177 RLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSL 356
+ LD++I + PN +YN I + ++V+EA + + L K Y ++ SL
Sbjct: 378 KCLDEMIYRRCRPNEGTYNAIGALCEHNNKVQEAFYIIQSLSNKQKCCTHDFYKSVITSL 437
Query: 357 CYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPN 536
C + A +LL EM P TY+ LI L G A+EVL + + P
Sbjct: 438 CRKGNTFAAFQLLYEMTRCGFDPDSHTYSSLIRGLCLEGMFRGAMEVLSIMEESEHYRPT 497
Query: 537 ASSYN 551
++N
Sbjct: 498 VDNFN 502
>gb|ESW21266.1| hypothetical protein PHAVU_005G056300g [Phaseolus vulgaris]
Length = 571
Score = 280 bits (715), Expect = 2e-73
Identities = 136/185 (73%), Positives = 164/185 (88%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
T TVTYN+LV+GLC+ GNLN+SLQ +++L +KGLVPNA+T+S LLEAAYKERGVD+A++L
Sbjct: 167 TTTVTYNTLVKGLCMHGNLNQSLQLLDKLTKKGLVPNAFTFSFLLEAAYKERGVDDARKL 226
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+IIAKGG PNLVSYNV+LTGLC E+R E+AIRLFR+LPAKGF P+VVSYNILLRSLCY
Sbjct: 227 LDEIIAKGGKPNLVSYNVLLTGLCKEERTEDAIRLFRELPAKGFTPSVVSYNILLRSLCY 286
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM +SPS+VTYNILI SL+FHGRT+QA +VLD++ R G F +A+
Sbjct: 287 EERWEEANELLAEMDKQGQSPSVVTYNILITSLSFHGRTEQAFQVLDEMTRSG-FKVSAT 345
Query: 543 SYNPI 557
SYNPI
Sbjct: 346 SYNPI 350
Score = 76.6 bits (187), Expect = 4e-12
Identities = 38/133 (28%), Positives = 70/133 (52%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y +++ LC GN + Q + + + G P+++TYS ++ +E +DEA ++ +
Sbjct: 416 YKNVIASLCRKGNTYAAFQMLYEMTKYGFTPDSFTYSSMIRGMCREGMLDEALKIFRILE 475
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
PN+ +YN ++ G C R + +I +F + KG PN +Y IL+ L +E +
Sbjct: 476 ENDHIPNIDNYNALILGFCKARRTDMSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETD 535
Query: 378 EANELLAEMVGDD 416
A +LL E+ G +
Sbjct: 536 IAADLLKELCGKE 548
Score = 73.9 bits (180), Expect = 2e-11
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 34/202 (16%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTY---SILLEAAYKERGV---- 164
+ +YN +V LC G ++ +Q I++++Q+ PN TY ++L E A +
Sbjct: 343 SATSYNPIVARLCKEGKVDLVVQCIDQMIQRRCNPNDGTYCAVAMLCEQAKVQEAFFIIQ 402
Query: 165 -----------DEAKRLLDDIIAKGGN----------------PNLVSYNVILTGLCNED 263
D K ++ + KG P+ +Y+ ++ G+C E
Sbjct: 403 SLGSKQSNPMHDFYKNVIASLCRKGNTYAAFQMLYEMTKYGFTPDSFTYSSMIRGMCREG 462
Query: 264 RVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYN 443
++EA+++FR L PN+ +YN L+ C R + + E+ MV P+ TY
Sbjct: 463 MLDEALKIFRILEENDHIPNIDNYNALILGFCKARRTDMSIEIFLMMVNKGCVPNENTYT 522
Query: 444 ILIGSLAFHGRTDQALEVLDDL 509
IL+ LAF TD A ++L +L
Sbjct: 523 ILVEGLAFEEETDIAADLLKEL 544
Score = 69.3 bits (168), Expect = 6e-10
Identities = 41/134 (30%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE V +A L+ ++ KG P + +L LC ++ +A+++ + G P+
Sbjct: 76 KELRVYDAFLHLEYLVGKGQKPEVTQATQLLYDLCKFNKARKAVKVMDMIVDSGIMPDAA 135
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY LL LC A +L+ +M G + VTYN L+ L HG +Q+L++LD L
Sbjct: 136 SYTYLLNFLCKRGNIGYALQLVEKMEGHGFPTTTVTYNTLVKGLCMHGNLNQSLQLLDKL 195
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +++
Sbjct: 196 TKKG-LVPNAFTFS 208
Score = 68.9 bits (167), Expect = 8e-10
Identities = 43/158 (27%), Positives = 74/158 (46%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E L+ KG P + LL K +A +++D I+ G P+ SY +L LC
Sbjct: 87 LEYLVGKGQKPEVTQATQLLYDLCKFNKARKAVKVMDMIVDSGIMPDAASYTYLLNFLCK 146
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVT 437
+ A++L + GF V+YN L++ LC ++ +LL ++ P+ T
Sbjct: 147 RGNIGYALQLVEKMEGHGFPTTTVTYNTLVKGLCMHGNLNQSLQLLDKLTKKGLVPNAFT 206
Query: 438 YNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
++ L+ + D A ++LD++ G PN SYN
Sbjct: 207 FSFLLEAAYKERGVDDARKLLDEIIAKGG-KPNLVSYN 243
>ref|XP_006585428.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like isoform X2 [Glycine max]
Length = 405
Score = 277 bits (709), Expect = 1e-72
Identities = 135/185 (72%), Positives = 163/185 (88%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYN+LV+GLC+ GNLN+SLQ ++RL +KGL+PNA+TYS LLEAAYKERGVDEA +L
Sbjct: 167 TNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKL 226
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R EEAI+LF++LP KGF+P+VVS+NILLRSLCY
Sbjct: 227 LDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCY 286
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM +D+ PS+VTYNILI SL+ +GRT+QA +VLD++ R G F +A+
Sbjct: 287 EGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSG-FKASAT 345
Query: 543 SYNPI 557
SYNPI
Sbjct: 346 SYNPI 350
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/158 (29%), Positives = 76/158 (48%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E L+ KG P + LL K +A R+++ ++ G P+ SY ++ LC
Sbjct: 87 LEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCK 146
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVT 437
V AI+L + GF N V+YN L++ LC ++ +LL + P+ T
Sbjct: 147 RGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFT 206
Query: 438 YNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
Y+ L+ + D+A+++LDD+ G PN SYN
Sbjct: 207 YSFLLEAAYKERGVDEAMKLLDDIIAKGG-EPNLVSYN 243
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/134 (30%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE + +A L+ ++ KG P + +L LC ++ +A+R+ + G P+
Sbjct: 76 KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ LC A +L+ +M G + VTYN L+ L HG +Q+L++LD L
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 196 TKKGLI-PNAFTYS 208
>ref|XP_004294203.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 566
Score = 277 bits (709), Expect = 1e-72
Identities = 133/185 (71%), Positives = 158/185 (85%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNT+TYNSLVRGLC+ GNLNKSLQ +++L+ KGLVPN YTYS L+EAAYKERGV+EA +L
Sbjct: 164 TNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLVPNVYTYSFLIEAAYKERGVNEAMKL 223
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
L++IIAKGG PNLVSYNV+LTGLC E R +EA++ FR LP+ G PNVVSYNI+LRSLCY
Sbjct: 224 LEEIIAKGGKPNLVSYNVLLTGLCKEGRSDEAMKFFRSLPSMGLRPNVVSYNIVLRSLCY 283
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEAN LLAEM G+DR PS+ TYNILIGSL+ HGRT+ ALEVLD++ + RF P A+
Sbjct: 284 EGRWEEANVLLAEMDGEDRIPSVATYNILIGSLSLHGRTEHALEVLDEMAK-SRFKPTAA 342
Query: 543 SYNPI 557
SYNPI
Sbjct: 343 SYNPI 347
Score = 97.8 bits (242), Expect = 2e-18
Identities = 52/175 (29%), Positives = 96/175 (54%)
Frame = +3
Query: 27 LVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKG 206
L+ LC + K+++ +E ++ G++P+A +Y+ L+ K + A +L++ + G
Sbjct: 102 LLYDLCKASKMRKAMRVMEMMVASGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYG 161
Query: 207 GNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEAN 386
N ++YN ++ GLC + ++++L L KG PNV +Y+ L+ + E EA
Sbjct: 162 YPTNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLVPNVYTYSFLIEAAYKERGVNEAM 221
Query: 387 ELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
+LL E++ P++V+YN+L+ L GR+D+A++ L G PN SYN
Sbjct: 222 KLLEEIIAKGGKPNLVSYNVLLTGLCKEGRSDEAMKFFRSLPSMG-LRPNVVSYN 275
Score = 75.1 bits (183), Expect = 1e-11
Identities = 40/136 (29%), Positives = 71/136 (52%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
+ T Y +++ LC GN +LQ + + + P++YTYS L+ E ++EA +
Sbjct: 408 STTEFYRNVITSLCRKGNTYPALQILYEMTKYRFTPDSYTYSSLIRGLCLEGMLNEAVEI 467
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
+ P+ ++N +L G+C R + A+++F + KG PN ++Y IL+ L +
Sbjct: 468 FKVMEENNQRPDTENFNALLLGICKCRRTDLALQVFEMMIEKGRMPNEMTYTILVEGLAH 527
Query: 363 EARWEEANELLAEMVG 410
E E A E+L E+ G
Sbjct: 528 EKEMELATEVLRELQG 543
Score = 73.9 bits (180), Expect = 2e-11
Identities = 42/162 (25%), Positives = 83/162 (51%)
Frame = +3
Query: 66 SLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILT 245
+ Q +E + KG P+ + LL K + +A R+++ ++A G P+ SY ++
Sbjct: 80 AFQHLESMTGKGQKPDVGQATQLLYDLCKASKMRKAMRVMEMMVASGIIPDAASYTFLVN 139
Query: 246 GLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSP 425
LC + A++L + G+ N ++YN L+R LC ++ +LL +++ P
Sbjct: 140 YLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLVP 199
Query: 426 SIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
++ TY+ LI + ++A+++L+++ G PN SYN
Sbjct: 200 NVYTYSFLIEAAYKERGVNEAMKLLEEIIAKGG-KPNLVSYN 240
Score = 66.2 bits (160), Expect = 5e-09
Identities = 44/177 (24%), Positives = 84/177 (47%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N T+N++ LC G + ++ I+ L K Y ++ + ++ A ++L
Sbjct: 375 NEGTFNAIAV-LCEQGKVQQAYSIIQSLGNKQKCSTTEFYRNVITSLCRKGNTYPALQIL 433
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ P+ +Y+ ++ GLC E + EA+ +F+ + P+ ++N LL +C
Sbjct: 434 YEMTKYRFTPDSYTYSSLIRGLCLEGMLNEAVEIFKVMEENNQRPDTENFNALLLGICKC 493
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPN 536
R + A ++ M+ R P+ +TY IL+ LA + A EVL +L +PN
Sbjct: 494 RRTDLALQVFEMMIEKGRMPNEMTYTILVEGLAHEKEMELATEVLRELQGRRVMSPN 550
>ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like isoform X1 [Glycine max]
Length = 572
Score = 277 bits (709), Expect = 1e-72
Identities = 135/185 (72%), Positives = 163/185 (88%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYN+LV+GLC+ GNLN+SLQ ++RL +KGL+PNA+TYS LLEAAYKERGVDEA +L
Sbjct: 167 TNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKL 226
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LDDIIAKGG PNLVSYNV+LTGLC E R EEAI+LF++LP KGF+P+VVS+NILLRSLCY
Sbjct: 227 LDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCY 286
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANELLAEM +D+ PS+VTYNILI SL+ +GRT+QA +VLD++ R G F +A+
Sbjct: 287 EGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSG-FKASAT 345
Query: 543 SYNPI 557
SYNPI
Sbjct: 346 SYNPI 350
Score = 76.6 bits (187), Expect = 4e-12
Identities = 38/129 (29%), Positives = 68/129 (52%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y +L+ LC GN + Q + + + G P++YTYS L+ +E +DEA ++ +
Sbjct: 416 YKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILE 475
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P++ +YN ++ G C R + +I +F + KG PN +Y IL+ L +E +
Sbjct: 476 ENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETD 535
Query: 378 EANELLAEM 404
A +L+ E+
Sbjct: 536 IAADLMKEL 544
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/158 (29%), Positives = 76/158 (48%)
Frame = +3
Query: 78 IERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCN 257
+E L+ KG P + LL K +A R+++ ++ G P+ SY ++ LC
Sbjct: 87 LEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCK 146
Query: 258 EDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVT 437
V AI+L + GF N V+YN L++ LC ++ +LL + P+ T
Sbjct: 147 RGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFT 206
Query: 438 YNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
Y+ L+ + D+A+++LDD+ G PN SYN
Sbjct: 207 YSFLLEAAYKERGVDEAMKLLDDIIAKGG-EPNLVSYN 243
Score = 72.8 bits (177), Expect = 5e-11
Identities = 46/169 (27%), Positives = 84/169 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N TY S + L G + ++ I+ L K P Y L+ + ++ A ++L
Sbjct: 378 NEGTY-SAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQML 436
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++ G P+ +Y+ ++ G+C E ++EA+++FR L P++ +YN L+ C
Sbjct: 437 YEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKA 496
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
R + + E+ MV P+ TY IL+ LAF TD A +++ +L+
Sbjct: 497 QRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELY 545
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/134 (30%), Positives = 68/134 (50%)
Frame = +3
Query: 150 KERGVDEAKRLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVV 329
KE + +A L+ ++ KG P + +L LC ++ +A+R+ + G P+
Sbjct: 76 KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135
Query: 330 SYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDL 509
SY L+ LC A +L+ +M G + VTYN L+ L HG +Q+L++LD L
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 510 FRDGRFNPNASSYN 551
+ G PNA +Y+
Sbjct: 196 TKKGLI-PNAFTYS 208
>ref|XP_002300545.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847803|gb|EEE85350.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 567
Score = 273 bits (699), Expect = 2e-71
Identities = 135/185 (72%), Positives = 158/185 (85%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
TNTVTYNSLVRGLC GNLN+SLQ +++LM+KGLVPN +T+S LLEAAYKERGVDEA +L
Sbjct: 165 TNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKL 224
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD IIAKGG PNLVSYNV+LTGLC E R EEAI+ FRDLP+KGFNPNVVS NI+LRSLC
Sbjct: 225 LDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCC 284
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNAS 542
E RWEEANEL+AEM ++RSPS+VTYNILIGSLA HGR A +VLD++ R F P+A+
Sbjct: 285 EGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMR-ASFQPSAA 343
Query: 543 SYNPI 557
++NPI
Sbjct: 344 TFNPI 348
Score = 79.7 bits (195), Expect = 4e-13
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Frame = +3
Query: 12 VTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDD 191
VTYN L+ L G + + Q ++ +M+ P+A T++ ++ KE D + LD
Sbjct: 308 VTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQ 367
Query: 192 IIAKGGNPNLVSYNVI----------------------------------LTGLCNEDRV 269
+I NPN ++N I ++ LC +
Sbjct: 368 MIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNT 427
Query: 270 EEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGDDRSPSIVTYNIL 449
A +L ++ GF P+ +Y+ L+R LC E +EA E+ + +D P + +N L
Sbjct: 428 YPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNAL 487
Query: 450 IGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
I GRTD +LE+ + + G + PN ++Y
Sbjct: 488 ILGFCKSGRTDLSLEIFEMMILKG-YTPNETTY 519
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/129 (30%), Positives = 66/129 (51%)
Frame = +3
Query: 18 YNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDII 197
Y ++ LC GN + Q + ++Q G VP+ YTYS L+ E +DEA + +
Sbjct: 414 YRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLE 473
Query: 198 AKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWE 377
P L ++N ++ G C R + ++ +F + KG+ PN +Y IL+ + +E E
Sbjct: 474 ENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKE 533
Query: 378 EANELLAEM 404
A E+L E+
Sbjct: 534 LAAEVLKEL 542
Score = 73.9 bits (180), Expect = 2e-11
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Frame = +3
Query: 57 LNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYNV 236
LN + +E +++KG P+ + LL K + +A R+++ I G P+ SY
Sbjct: 78 LNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTF 137
Query: 237 ILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLC------------------- 359
++ LC + A++L + G N V+YN L+R LC
Sbjct: 138 LVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKG 197
Query: 360 ---------------YEARW-EEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQAL 491
Y+ R +EA +LL ++ P++V+YN+L+ L GRT++A+
Sbjct: 198 LVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 257
Query: 492 EVLDDLFRDGRFNPNASSYNPI 557
+ DL G FNPN S N I
Sbjct: 258 QFFRDLPSKG-FNPNVVSCNII 278
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/169 (26%), Positives = 84/169 (49%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLL 185
N T+N++ LC G + ++ I+ L K Y ++ + ++ A +LL
Sbjct: 376 NDGTFNAIAV-LCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLL 434
Query: 186 DDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYE 365
++I G P+ +Y+ ++ GLC E ++EA+ +FR L + P + ++N L+ C
Sbjct: 435 YEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKS 494
Query: 366 ARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLF 512
R + + E+ M+ +P+ TY IL+ +A + A EVL +L+
Sbjct: 495 GRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELY 543
>gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 271 bits (694), Expect = 6e-71
Identities = 132/186 (70%), Positives = 158/186 (84%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 TNTVTYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRL 182
+NTVTYN+LVRGLC+ G+LN+SLQF+ERLMQKGL PNA+TYS LLEAAYKERG DEA +L
Sbjct: 164 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 223
Query: 183 LDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCY 362
LD+II KGG PNLVSYNV+LTG C E R ++A+ LFR+LPAKGF NVVSYNILLR LC
Sbjct: 224 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 283
Query: 363 EARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFR-DGRFNPNA 539
+ RWEEAN LLAEM G DR+PS+VTYNILI SLAFHGRT+QAL+VL ++ + + +F A
Sbjct: 284 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 343
Query: 540 SSYNPI 557
+SYNP+
Sbjct: 344 TSYNPV 349
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/166 (27%), Positives = 84/166 (50%)
Frame = +3
Query: 54 NLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDIIAKGGNPNLVSYN 233
NL+ S +E L+ G PN + LL K + +A R+++ +++ G P+ +Y
Sbjct: 76 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 135
Query: 234 VILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARWEEANELLAEMVGD 413
++ LC V A++L + G+ N V+YN L+R LC ++ + + ++
Sbjct: 136 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 195
Query: 414 DRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSYN 551
+P+ TY+ L+ + TD+A+++LD++ G PN SYN
Sbjct: 196 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYN 240
Score = 70.9 bits (172), Expect = 2e-10
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 15 TYNSLVRGLCICGNLNKSLQFIERLMQKGLVPNAYTYSILLEAAYKERGVDEAKRLLDDI 194
+YN ++ LC G ++ ++ ++ ++ + PN TY+ + V EA ++ +
Sbjct: 345 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 404
Query: 195 IAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSLCYEARW 374
K Y ++T LC + A +L ++ GF+P+ +Y+ L+R LC E +
Sbjct: 405 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 464
Query: 375 EEANELLAEM-VGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPNASSY 548
A E+L+ M ++ P++ +N +I L RTD A+EV + + R PN ++Y
Sbjct: 465 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM-PNETTY 522
Score = 66.6 bits (161), Expect = 4e-09
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Frame = +3
Query: 6 NTVTYNSLVRGLCICGNLNKSLQFIERLMQKG---LVPNAYTYSILLEAAYKERGVDEAK 176
+ VTYN L+ L G ++LQ ++ M KG A +Y+ ++ KE VD
Sbjct: 305 SVVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 363
Query: 177 RLLDDIIAKGGNPNLVSYNVILTGLCNEDRVEEAIRLFRDLPAKGFNPNVVSYNILLRSL 356
+ LD++I + PN +YN I + + +V+EA + + L K Y ++ SL
Sbjct: 364 KCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSL 423
Query: 357 CYEARWEEANELLAEMVGDDRSPSIVTYNILIGSLAFHGRTDQALEVLDDLFRDGRFNPN 536
C + A +LL EM P TY+ LI L G A+EVL + P
Sbjct: 424 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPT 483
Query: 537 ASSYN 551
++N
Sbjct: 484 VDNFN 488