BLASTX nr result

ID: Rehmannia23_contig00014725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00014725
         (572 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353332.1| PREDICTED: methyl-CpG-binding domain-contain...    79   8e-13
ref|XP_004234378.1| PREDICTED: uncharacterized protein LOC101246...    77   4e-12
ref|XP_003549104.1| PREDICTED: methyl-CpG-binding domain-contain...    57   3e-06

>ref|XP_006353332.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           isoform X1 [Solanum tuberosum]
           gi|565373550|ref|XP_006353333.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 13-like
           isoform X2 [Solanum tuberosum]
          Length = 594

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 52/123 (42%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = -3

Query: 561 KGVGVDCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIEEVTKVGEXXXXXXXXX 382
           K V   C+ ++K +  L+SSL +L  DPCIEFAIKTLTG IP+    KV E         
Sbjct: 422 KTVLASCEGDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKVDEIPGSNSSKP 481

Query: 381 XXXXXXXSG----DILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSS 214
                   G    +I ADPCF FAVK LTGE+P+ D    Q   QQ    SS+  G N  
Sbjct: 482 SVNTPSSVGLPSDEIWADPCFMFAVKTLTGEIPIGDDLCSQKIVQQQCT-SSQFQGNNGL 540

Query: 213 TSP 205
             P
Sbjct: 541 VLP 543


>ref|XP_004234378.1| PREDICTED: uncharacterized protein LOC101246025 [Solanum
           lycopersicum]
          Length = 587

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
 Frame = -3

Query: 561 KGVGVDCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIEEVTKVGEXXXXXXXXX 382
           K V   C  ++K +  L+SSL +L  DPCIEFAIKTLTG IP+    K+ E         
Sbjct: 425 KTVLASCDVDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKLDEIPGSSSSKP 484

Query: 381 XXXXXXXSG----DILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGS 241
                   G    +I ADPCF FAVK LTGE+P+ D    Q   QQ    S
Sbjct: 485 SVNTPSSVGLPSDEIWADPCFMFAVKTLTGEIPIGDELCSQKIVQQQCTSS 535


>ref|XP_003549104.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           [Glycine max]
          Length = 546

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/99 (33%), Positives = 51/99 (51%)
 Frame = -3

Query: 342 DPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPSIYSV 163
           DPC EFA+K LTG +P + + +   +  Q  + SS +     + S V + DN+Y + YS 
Sbjct: 444 DPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALSSVSL-DNIYKTDYSC 502

Query: 162 NQFDAVKKPSMRQQAVRDPPFPPAINGSSLNSVGTGLHH 46
           +Q+   +KP   +Q+  DP      N    NS G+ L H
Sbjct: 503 SQYFDTQKPMFNKQSFVDPSLQHTRNIGIGNSAGSRLSH 541


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