BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00013527
         (1301 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   354   5e-95
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   351   3e-94
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   349   2e-93
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   339   1e-90
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   335   3e-89
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           335   3e-89
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       333   7e-89
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                328   4e-87
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               327   5e-87
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   326   1e-86
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   325   3e-86
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   323   7e-86
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   320   6e-85
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             319   1e-84
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               319   1e-84
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   317   7e-84
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   316   1e-83
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   312   2e-82
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   310   1e-81
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   308   4e-81

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  354 bits (908), Expect = 5e-95
 Identities = 171/374 (45%), Positives = 239/374 (63%), Gaps = 6/374 (1%)
 Frame = -3

Query: 1275 KILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKA 1096
            K +    A V++ II  +Q  FI GR I +NI L  EL++ Y RK  SPRC +KIDL KA
Sbjct: 337  KSIGNDKAPVIHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKA 396

Query: 1095 FDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLS 916
            +DSV W FL++++EGLGFP  F  W+++CV + +++I +NG     F   KGLRQGDP+S
Sbjct: 397  YDSVEWPFLEQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMS 456

Query: 915  PYLFVICIEYLSRLLK-TKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMD 739
            P+LF I +EYLSRLLK  K    F +HP    L +THL +ADDL+L SRGD  S++ L  
Sbjct: 457  PFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQK 516

Query: 738  CLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPLAAERLKV 559
            C  +F   SGL  N+ KS+IY   V     + I+     T   +PF+YLG+PL++++L  
Sbjct: 517  CFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNT 576

Query: 558  IYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLC 379
            I + PL+ K+ + IN W++  LSYAGR +LV++VL GV+  W  +F IPA++   I  LC
Sbjct: 577  IQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLC 636

Query: 378  RRYLWD-----NGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQKDTLWY 214
            R YLW        KA IAWD +C PK EGGLGL +LK WN++ +TK  W++  ++D LW 
Sbjct: 637  RSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWI 696

Query: 213  RWVHHTYLRAQTVW 172
            +W+H  Y++ Q  W
Sbjct: 697  KWIHAYYIKGQREW 710


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  351 bits (901), Expect = 3e-94
 Identities = 166/403 (41%), Positives = 253/403 (62%), Gaps = 6/403 (1%)
 Frame = -3

Query: 1296 VIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTI 1117
            VIYKII+K+L  R+  ++  +++ AQ  FI GR+I +NI L  EL+R Y RK  SPRC +
Sbjct: 522  VIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIM 581

Query: 1116 KIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGL 937
            K+D+RKA+DSV WSFL+ +L   GFP  F  WI++CV++ S+S+ +NG     F+  KGL
Sbjct: 582  KVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGL 641

Query: 936  RQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDPT 760
            RQGDP+SP+LF +C+EYLSR L + K    FNFHP C  L ITHL++ADDL++  R D +
Sbjct: 642  RQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKS 701

Query: 759  SVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPL 580
            S+  +      F   SGL  +  KSNIY   VD+     +     +  G +PFRYLG+PL
Sbjct: 702  SLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPL 761

Query: 579  AAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVR 400
             +++L     +PL+  I++    W +  LSYAGR +L++S+L  ++ +W  +FP+  +V 
Sbjct: 762  TSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVI 821

Query: 399  TKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHG 235
              + ++CR++LW     +  KA +AW T+  PK+ GG  + ++K WN+A + K LW I  
Sbjct: 822  QAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEF 881

Query: 234  QKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQL 106
            ++D LW RW+H  Y++ Q +   N+ N  + +++ I+  RD L
Sbjct: 882  KRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHL 924


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  349 bits (895), Expect = 2e-93
 Identities = 173/410 (42%), Positives = 263/410 (64%), Gaps = 6/410 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            + +YKII+KIL  RL +V+  ++D AQ  FI  R+I +NI L  EL+R YNR+  SPRC 
Sbjct: 524  STLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCV 583

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IK+D+RKA+DSV W FL+ ML+ LGFP  F  WI+ CV + S+SI +NG     F  +KG
Sbjct: 584  IKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKG 643

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDPLSP+LF + +EYLSR +    +   FNFHP C  +++THL++ADDL++ +R D 
Sbjct: 644  LRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADA 703

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
            +S+  +M     F   SGL  +I KS IY   V   + E +    Q+  G++PFRYLG+P
Sbjct: 704  SSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVP 763

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            LA+++L     +PL++KI++   GW +  LSYAGR +LV+++L  ++ +W  +FP+P ++
Sbjct: 764  LASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKL 823

Query: 402  RTKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
               +   CR++LW      + KA +AWD L  PK+ GGL + ++  WN+A + K LW I 
Sbjct: 824  IKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAIT 883

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGG 88
             ++D LW RWV+  Y++ Q + +  V ++ S +++ I  +R +L+   GG
Sbjct: 884  FKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESR-ELLTRTGG 932


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  339 bits (870), Expect = 1e-90
 Identities = 182/424 (42%), Positives = 254/424 (59%), Gaps = 6/424 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N IYK+I+K+LA RL ++L   I  +Q AF+KGR + EN+ L  EL++ + +   S R  
Sbjct: 529  NAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGV 588

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +K+DLRKAFDSV W F+ E L+    PP F NWI QC+TS SFSI+++G L G+FKG KG
Sbjct: 589  LKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKG 648

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDPLSP LFVI +E LSRLL+ K +     +HP    +RI+ L +ADDLM+   G  
Sbjct: 649  LRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKA 708

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
            +S++ +   L  F   SGL MN  KS +Y A +++ D E  L +     GT PFRYLG+P
Sbjct: 709  SSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPFRYLGLP 767

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L   +L+   Y  L++KI++  N W++ TLS+AGR +L+ SV+     FW+S F +P   
Sbjct: 768  LLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCC 827

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
               I Q+C R+LW N     G   ++W   CLPK EGGLGLR+  TWN+ L  + +W + 
Sbjct: 828  LKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLF 887

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLT 58
             ++D+LW  W H   LR    W+    +  S + K IL  R        G+V   +  L+
Sbjct: 888  ARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQL-LS 946

Query: 57   YWRD 46
            YW D
Sbjct: 947  YWYD 950


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  335 bits (858), Expect = 3e-89
 Identities = 171/403 (42%), Positives = 247/403 (61%), Gaps = 8/403 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N +YK+I+K+L  RL  +L+ +I  +Q AF+ GR++ EN+ L  E++  YNR   SPR  
Sbjct: 390  NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +K+DL+KAFDSV W F+   L  L  P  + NWI QC+T+PSF+IS+NG   GFF+  KG
Sbjct: 450  LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDPLSPYLFV+ +E  S+LL ++  S + ++HP  G L I+HL++ADD+M+   G  
Sbjct: 510  LRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGS 569

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQ--LTRGTMPFRYLG 589
            +S+  + + L DF   SGL +N  KS ++ A +D  +    +TS       GT P RYLG
Sbjct: 570  SSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER---ITSAAYGFPAGTFPIRYLG 626

Query: 588  IPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPA 409
            +PL   +L++  Y PLL K+S+ +  W S  LS+AGRT+L+ SV+ G+  FWMS F +P 
Sbjct: 627  LPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPK 686

Query: 408  EVRTKIIQLCRRYLW----DNGKAC-IAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWN 244
                KI  LC ++LW    D  K+  ++W   CLPK+EGGLG R    WN+ LL + +W 
Sbjct: 687  GCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWV 746

Query: 243  IHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTR 115
            +  +  +LW +W  H  L   + W  N   +D    K +LN R
Sbjct: 747  LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  335 bits (858), Expect = 3e-89
 Identities = 171/403 (42%), Positives = 247/403 (61%), Gaps = 8/403 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N +YK+I+K+L  RL  +L+ +I  +Q AF+ GR++ EN+ L  E++  YNR   SPR  
Sbjct: 390  NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +K+DL+KAFDSV W F+   L  L  P  + NWI QC+T+PSF+IS+NG   GFF+  KG
Sbjct: 450  LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDPLSPYLFV+ +E  S+LL ++  S + ++HP  G L I+HL++ADD+M+   G  
Sbjct: 510  LRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGS 569

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQ--LTRGTMPFRYLG 589
            +S+  + + L DF   SGL +N  KS ++ A +D  +    +TS       GT P RYLG
Sbjct: 570  SSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER---ITSAAYGFPAGTFPIRYLG 626

Query: 588  IPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPA 409
            +PL   +L++  Y PLL K+S+ +  W S  LS+AGRT+L+ SV+ G+  FWMS F +P 
Sbjct: 627  LPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPK 686

Query: 408  EVRTKIIQLCRRYLW----DNGKAC-IAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWN 244
                KI  LC ++LW    D  K+  ++W   CLPK+EGGLG R    WN+ LL + +W 
Sbjct: 687  GCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWV 746

Query: 243  IHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTR 115
            +  +  +LW +W  H  L   + W  N   +D    K +LN R
Sbjct: 747  LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  333 bits (855), Expect = 7e-89
 Identities = 178/434 (41%), Positives = 258/434 (59%), Gaps = 10/434 (2%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N +YK+I ++L  RL  +L+ +I  AQ AF+ GR++ EN+ L  +L+  YN    SPR  
Sbjct: 530  NTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGM 589

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +K+DL+KAFDSV W F+   L  L  P  F NWI QC+++P+F++SINGG  GFFK  KG
Sbjct: 590  LKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKG 649

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTKTQSH-FNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDPLSPYLFV+ +E  S LL ++ +S   ++HP    L I+HL++ADD+M+   G  
Sbjct: 650  LRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGS 709

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S+  + + L DF + SGL +N  KS++Y+A +++ ++ A   +     GT+P RYLG+P
Sbjct: 710  FSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNA-NAAYGFPIGTLPIRYLGLP 768

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L   +L++  YEPLL KI++    W +  LS+AGR +L+ SV+ G   FWMS F +P   
Sbjct: 769  LMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGC 828

Query: 402  RTKIIQLCRRYLW----DNGKAC-IAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I  LC R+LW    +  K   ++W  LCLPK+EGGLGLR L  WN+ L  + +W + 
Sbjct: 829  IKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLF 888

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTR----DQLIAECGGSVQLAE 70
              KD+LW  W H  +L   + W      SDS   K +L+ R      L+ + G  +    
Sbjct: 889  VAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGL---- 944

Query: 69   AKLTYWRDGLPGTG 28
             K  YW D     G
Sbjct: 945  -KADYWYDNWTSLG 957


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  328 bits (840), Expect = 4e-87
 Identities = 169/425 (39%), Positives = 255/425 (60%), Gaps = 7/425 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NVIYK+I+KI+A RL  +L   I   Q AF++ R ++EN+ L  EL++ Y++   SPRC 
Sbjct: 109  NVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCA 168

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +KID+ KAFDSV W FL   LE L FP  F +WI  C+++ +FS+ +NG L GFF  ++G
Sbjct: 169  MKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRG 228

Query: 939  LRQGDPLSPYLFVICIEYLSRLLK-TKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC+  LS ++       +  +HP C  L +THL +ADDLM+   G  
Sbjct: 229  LRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQ 288

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             SV+ +++   +F  KSGLH+++ KS +Y+A V E +   IL++     G +P RYLG+P
Sbjct: 289  RSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLP 348

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +++    Y PLL+K+ S I+ W++ +LSYAGR  L+ SV+  +  FWMS + +PA  
Sbjct: 349  LLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGC 408

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW        KA I W +LC  K EGGLG++ L   N+    K +W + 
Sbjct: 409  IKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLV 468

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGSVQLAEAKL 61
             ++ +LW  WV    +R  + W  N ++S  S + K +L  RD   + C   ++ + +  
Sbjct: 469  SRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIK-SGSST 527

Query: 60   TYWRD 46
            ++W D
Sbjct: 528  SFWYD 532


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  327 bits (839), Expect = 5e-87
 Identities = 175/426 (41%), Positives = 254/426 (59%), Gaps = 8/426 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK+I+KI+A RL  +L   I   Q AF+K R ++EN+ L  EL++ Y++   S RC 
Sbjct: 183  NVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCA 242

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IKID+ KAFDSV WSFL   L  + F PTF +WI  C+T+ SFS+ +NG L G+F+ ++G
Sbjct: 243  IKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRG 302

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC++ LS++L K      F FHP C  L +THL +ADDLM+LS G  
Sbjct: 303  LRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKT 362

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S++ +++   +F  +SGL +++ KS +YMA V     + I        G +P RYLG+P
Sbjct: 363  RSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLP 422

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +RL    Y PLL +I   I  W+    S+AGR  L++SVL  +  FW++ F +P + 
Sbjct: 423  LVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQC 482

Query: 402  RTKIIQLCRRYLWDNG-----KACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW        KA I+WD +C PK EGGLGLR+LK  N     K +W I 
Sbjct: 483  IREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRII 542

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGSVQLAEAK- 64
               ++LW +WV    +R +++W      S  S + + IL  RD  +A+    V++   + 
Sbjct: 543  SNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRD--VAKSFSRVEVGNGES 600

Query: 63   LTYWRD 46
             ++W D
Sbjct: 601  ASFWYD 606


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  326 bits (835), Expect = 1e-86
 Identities = 173/432 (40%), Positives = 252/432 (58%), Gaps = 8/432 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK+I+KI+A RL  VL   I G Q AF+K R ++EN+ L  EL++ Y++   S RC 
Sbjct: 536  NVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCA 595

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IKID+ KAFDSV W FL  +   LGFP  F +WI  C+T+ SFS+ +NG L G+F+  +G
Sbjct: 596  IKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRG 655

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC++ LS++L K     HF +HP C  + +THL +ADDLM+LS G  
Sbjct: 656  LRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKI 715

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S++ ++    +F   SGL +++ KS +Y+A +       +      + G +P RYLG+P
Sbjct: 716  RSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLP 775

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +RL      PLL ++   I  W+S  LSYAGR  L+ SVL  +  FW++ F +P + 
Sbjct: 776  LITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKC 835

Query: 402  RTKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              ++ ++C  +LW     ++ KA I+W  +C PK+EGGLGLR LK  N     K +W I 
Sbjct: 836  IRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIV 895

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLI-KNILNTRDQLIAECGGSVQLAEAKL 61
               ++LW +WV    LR  + W+     S    I K +L  R+  +A+    V++   K 
Sbjct: 896  SHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYRE--VAKTLSKVEVGNGKQ 953

Query: 60   T-YWRDGLPGTG 28
            T +W D     G
Sbjct: 954  TSFWYDNWSDLG 965


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  325 bits (833), Expect = 3e-86
 Identities = 169/425 (39%), Positives = 253/425 (59%), Gaps = 7/425 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NVIYK+I+KI+A RL  +L   I   Q AF++ R ++EN+ L  EL++ Y++   SPRC 
Sbjct: 678  NVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCA 737

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +KID+ KAFDSV W FL   LE L FP  F +WI  C+++ +FS+ +N    GFF  ++G
Sbjct: 738  MKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRG 797

Query: 939  LRQGDPLSPYLFVICIEYLSRLLK-TKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC+  LS ++       +  +HP C  L +THL +ADDLM+   G  
Sbjct: 798  LRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQ 857

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             SV+ +++   DF  KSGLH+++ KS +Y+A V E +   IL++     G +P RYLG P
Sbjct: 858  RSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFP 917

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +++    Y PLL+K+ S I+ W++ +LSYAGR  L+ SV+  +  FWMS + +PA  
Sbjct: 918  LLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGC 977

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW        KA I W +LC  K EGGLG++ L   N+    K +W + 
Sbjct: 978  IKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLV 1037

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGSVQLAEAKL 61
             ++ +LW  WV    +R  + W  N ++S  S + K +LN RD   + C   ++ + +  
Sbjct: 1038 SRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIK-SGSST 1096

Query: 60   TYWRD 46
            ++W D
Sbjct: 1097 SFWYD 1101


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  323 bits (829), Expect = 7e-86
 Identities = 166/426 (38%), Positives = 253/426 (59%), Gaps = 8/426 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK+I+KILA RL  +L   I   Q AF+K R ++EN+ L  EL++ Y+++  +PRC 
Sbjct: 833  NVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCA 892

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +KID+ KAFDSV W FL   LE L FP TF +WI  C+++ +FS+ +NG L GFF   +G
Sbjct: 893  MKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRG 952

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC+  LS ++ +     +  +HP C  + +THL +ADDLM+   G  
Sbjct: 953  LRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQ 1012

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S++ +++   +F  +SGL +++ KS IY+A V   D    L+S     G +P RYLG+P
Sbjct: 1013 WSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLP 1072

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +++    Y PL+  + + I+ W++ +LSYAGR  L+ SV+  +  FWMS + +PA  
Sbjct: 1073 LLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGC 1132

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW        KA IAW ++C PK EGGLG++ L   N+    K +W + 
Sbjct: 1133 IREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLL 1192

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGSVQLAEAKL 61
              + +LW  W+    +R  T W  N ++S  S + K +L  R+  +A+    V++     
Sbjct: 1193 STQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRE--LAKSMHKVEVRNGSS 1250

Query: 60   T-YWRD 46
            T +W D
Sbjct: 1251 TSFWYD 1256


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score =  320 bits (821), Expect = 6e-85
 Identities = 173/430 (40%), Positives = 247/430 (57%), Gaps = 6/430 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK+I+KI+A RL  VL   I G Q AFIK R ++EN+ L  EL++ Y++   S RC 
Sbjct: 54   NVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDSVSERCA 113

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IKID+ KAFDSV WSFL+ +L  L FP  F +WI+ CVT+ SFS+ +N  L G+F   +G
Sbjct: 114  IKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRG 173

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  L+PYLFVI ++ LS+ L +      F +HP C  L +THL +ADD+M+L+ G  
Sbjct: 174  LRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKL 233

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S++ +++    F  +SGL +++ K+ IY A + +   +          G +P RYL +P
Sbjct: 234  RSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLP 293

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +R     Y PLL +I   I  W++  LSYAGR  LV SVL  +  FW+S F +P E 
Sbjct: 294  LVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPREC 353

Query: 402  RTKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW        KA IAW+T+C PK EGGLGL+ +K  N     K +W I 
Sbjct: 354  VREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIV 413

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLT 58
             Q D+LW +W+    L+  T W +   +  S + K +L  RD   A     ++  E   +
Sbjct: 414  SQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGET-AS 472

Query: 57   YWRDGLPGTG 28
            +W D     G
Sbjct: 473  FWYDDWSSKG 482


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  319 bits (818), Expect = 1e-84
 Identities = 168/394 (42%), Positives = 235/394 (59%), Gaps = 7/394 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NVIYKII+KI+A RL  VL   I G Q AF+K R ++EN+ L  EL++ Y+++  S RC 
Sbjct: 63   NVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCA 122

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IKID+ KAF+SV WSF++ +L  + FP  F +WI+ C+++ SFS+ +NG L GFF+ ++G
Sbjct: 123  IKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRG 182

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFV+ ++ LS+LL +  +   F +H  C  L +THL +ADDLM+LS G  
Sbjct: 183  LRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKV 242

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S+  +++    F   SGL +++ KS IY+A V E     I    Q   G +P RYLG+P
Sbjct: 243  RSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLP 302

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +RL    Y PLL  I   I  W++  LSYAGR  L+ SVL  +  FW++ F +P E 
Sbjct: 303  LVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPREC 362

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I ++C  +LW        K  + W  +C PK EGGLGLR LK  N+    K +W I 
Sbjct: 363  IREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIV 422

Query: 237  GQKDTLWYRWVHHTYLRAQTVWD-WNVKNSDSPL 139
               ++LW RW+    L+  T W      N DS L
Sbjct: 423  SHTNSLWVRWIEQYLLKHDTFWSVQTTTNMDSVL 456


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  319 bits (818), Expect = 1e-84
 Identities = 173/425 (40%), Positives = 246/425 (57%), Gaps = 7/425 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK+I+KILA RL  +L   I G Q +F+K R ++EN+ L  +L++ Y++   S RC 
Sbjct: 89   NVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCA 148

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            IKID+ KA DSV WSFL   L  + FP  F +WI  C+T+PSFS+ +NG L GFF+  +G
Sbjct: 149  IKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRG 208

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVIC++ LS+LL K        +HP C  + +THL +ADDLM+L+ G  
Sbjct: 209  LRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQC 268

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S++ +++    F   SGL +++ KS I+ A +       + T      G +P RYLG+P
Sbjct: 269  RSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLP 328

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +RL  + Y PL+ +I   I  WSS  LS+AGR  L+ S++     FW+S F +P   
Sbjct: 329  LVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRAC 388

Query: 402  RTKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I +LC  +LW     ++ KA I+W+ +C PK+EGGLGLR LK  N     K +W I 
Sbjct: 389  IQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRII 448

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVK-NSDSPLIKNILNTRDQLIAECGGSVQLAEAKL 61
               D+LW +WV H  L+ +  W      N  S + K IL  R      C   V   E+  
Sbjct: 449  SHGDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGES-T 507

Query: 60   TYWRD 46
            ++W D
Sbjct: 508  SFWFD 512


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  317 bits (812), Expect = 7e-84
 Identities = 154/379 (40%), Positives = 236/379 (62%), Gaps = 6/379 (1%)
 Frame = -3

Query: 1221 QGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGF 1042
            Q AF+ G+ + +++ L  ELLR Y RK  +P+C ++ID++KA+D+V W  L+ +L  LGF
Sbjct: 375  QAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGF 434

Query: 1041 PPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK 862
            P  F  WI+  V S ++  +ING      +  +G+RQGDP+SP LF++ +EYL+R+L   
Sbjct: 435  PDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQL 494

Query: 861  TQ-SHFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKS 685
             +  +FN+H  C  ++IT+L +ADDL+L SRGD  SVQI++D    F    GLH+N  K 
Sbjct: 495  DKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKC 554

Query: 684  NIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWS 505
            NIY  +VD    E +L  +    G MPFRYLGIPL++++L + +Y+ L++KI   I  WS
Sbjct: 555  NIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWS 614

Query: 504  SSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KACIA 340
            +  LSYAGR +L++SV+     FWM   P+P  V  +I  +CR +LW        K+ IA
Sbjct: 615  AGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIA 674

Query: 339  WDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNV 160
            W+ +C PK  GGL + +L  WN+  + K LWN+  + D LW +W+H  Y+R Q++W   +
Sbjct: 675  WEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVL 734

Query: 159  KNSDSPLIKNILNTRDQLI 103
            K S S ++ +++  R  L+
Sbjct: 735  KKSHSWIMSSMMKLRPLLL 753


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  316 bits (810), Expect = 1e-83
 Identities = 155/384 (40%), Positives = 229/384 (59%), Gaps = 7/384 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N  YKII K+LA RL   L+ I+  +Q  FI GR I +NI L QE++  Y++    PRCT
Sbjct: 357  NTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCT 416

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
              +D+ KA D+V W F+   L+    P T   WI  C++S  FS+ +NG L GFF   +G
Sbjct: 417  FMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRG 476

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTKTQSH--FNFHPMCGALRITHLVYADDLMLLSRGD 766
            LRQGDPLSPYLFVI +E LS  ++ +      F +H  C  L ++HL +ADDL++   GD
Sbjct: 477  LRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGD 536

Query: 765  PTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGI 586
              SV+ L D  ++F + S L  N+ +S I++A VD   ++++L  T  + GT P RYLGI
Sbjct: 537  ENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGI 596

Query: 585  PLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAE 406
            PL   +L++    PLL++I + I  W +  LS+AGR +L++SVL  ++ +W S   +P +
Sbjct: 597  PLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKK 656

Query: 405  VRTKIIQLCRRYLWD---NGKAC--IAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNI 241
            V   I +  R +LW    +G+A   +AW  +CLPK EGGLG++DL  WN+AL+  ++WN+
Sbjct: 657  VLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNL 716

Query: 240  HGQKDTLWYRWVHHTYLRAQTVWD 169
                   W  WV    L+  + W+
Sbjct: 717  VSSSSNFWTDWVKVYLLKGNSFWN 740


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  312 bits (800), Expect = 2e-82
 Identities = 159/382 (41%), Positives = 231/382 (60%), Gaps = 6/382 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YK I+KILA RL  +L   I G Q AF+K R ++EN+ L  EL++ Y++   S RC 
Sbjct: 257  NVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCA 316

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +KID+ KAFDS+ WSFL  +L  + FP  F +WI  C+++ SFSI +NG L G+F+  +G
Sbjct: 317  MKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARG 376

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYLFVI ++ LSR+L K      F +HP C  L +THL +ADDLM+L+ G  
Sbjct: 377  LRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKI 436

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             SV  ++  L  F AK GL + + K+ +Y+A V +   + + +      G +P RYLG+P
Sbjct: 437  RSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLP 496

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +RL    Y PL+++I   I  W+S  LS+AGR  L+ SVL  +  FWM+ F +P E 
Sbjct: 497  LVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPREC 556

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I ++    LW        KA ++WD +C PK EGGLGL+ L+  N+    K +W + 
Sbjct: 557  INEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLL 616

Query: 237  GQKDTLWYRWVHHTYLRAQTVW 172
              +D+LW +W     L+ ++ W
Sbjct: 617  SCQDSLWVKWTRMNLLKKESFW 638


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  310 bits (793), Expect = 1e-81
 Identities = 164/406 (40%), Positives = 244/406 (60%), Gaps = 9/406 (2%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            NV+YKI++K++A RL  +L   I   Q AFIK R ++EN+ L  EL++ Y+++  S R  
Sbjct: 683  NVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSA 742

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +KID+ KAFD V W FL  +L+ +  P  F +WI  C+ + SFS+ +NG L GFF+ E+G
Sbjct: 743  LKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERG 802

Query: 939  LRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQG  LSPYL+VIC+  LS +L K   +   ++HP C  + +THL +ADD+M+ S G  
Sbjct: 803  LRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTS 862

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
             S+Q  +     F A S L +++ KS I+MA +      +IL       GT+P +YLG+P
Sbjct: 863  KSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLP 922

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L  +R+    Y PL+ KI + I  W++  LS+AGR +L++SVL  +  FW+SVF +P   
Sbjct: 923  LLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKAC 982

Query: 402  RTKIIQLCRRYLW-----DNGKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              +I ++   +LW     +  KA IAW  +C  K EGGLGL+ LK  N+  L K +W I 
Sbjct: 983  LQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRIL 1042

Query: 237  GQKDTLWYRWVHHTYLRAQTVWDWNVKNS---DSPLIKNILNTRDQ 109
              +D+LW +WV+   +R +T   W+VK +    S L + IL  RD+
Sbjct: 1043 SARDSLWVKWVNKHLIRKETF--WSVKENTGLGSWLWRKILKQRDK 1086


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  308 bits (788), Expect = 4e-81
 Identities = 159/402 (39%), Positives = 238/402 (59%), Gaps = 7/402 (1%)
 Frame = -3

Query: 1299 NVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCT 1120
            N +YK+I+K+L  RL   L   I  +Q AF+ GR  +EN+ L  EL+  YN+K  +P   
Sbjct: 427  NTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSM 486

Query: 1119 IKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKG 940
            +K+DLRKAFDSV W F+   L  L  P  F  WIL+C+++ SFS+ +NG   G F   KG
Sbjct: 487  LKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKG 546

Query: 939  LRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPMCGALRITHLVYADDLMLLSRGDP 763
            LRQGDP+SPYLFV+ +E  S LL+++ T  +  +HP    L I+HL++ADD+M+   G  
Sbjct: 547  LRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKS 606

Query: 762  TSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIP 583
            +S+  +++ L DF   SGL MN  K+ +Y A + + ++++ + S     G++P RYLG+P
Sbjct: 607  SSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDS-MASYGFKLGSLPVRYLGLP 665

Query: 582  LAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEV 403
            L + +L +  Y PL+ KI++  N W    LS+AGR +L+ SV+ G+  FW+S F +P   
Sbjct: 666  LMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGC 725

Query: 402  RTKIIQLCRRYLWDN-----GKACIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIH 238
              KI  LC R+LW +     G A +AW  +CLPK EGG+GLR     N+ L  + +W + 
Sbjct: 726  IKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLF 785

Query: 237  GQKDTLWYRW-VHHTYLRAQTVWDWNVKNSDSPLIKNILNTR 115
                +LW  W   H+  ++ + W+   K  DS   K +L  R
Sbjct: 786  SNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLR 827