BLASTX nr result

ID: Rehmannia23_contig00011493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011493
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349166.1| PREDICTED: nifU-like protein 1, chloroplasti...    57   3e-06
ref|XP_003625999.1| NifU-like protein [Medicago truncatula] gi|3...    56   4e-06
ref|XP_006649983.1| PREDICTED: nifU-like protein 1, chloroplasti...    56   6e-06
ref|XP_002301529.1| nitrogen fixation NifU-like family protein [...    55   1e-05

>ref|XP_006349166.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 214

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = +1

Query: 238 HRKLNVVKA----SSASGLYSADQFELTSENVDKVLDNVRPYLIAXXXXXXXXXXXXXXX 405
           H++ N+VKA    S + GLYSA QFELT ENVD VL++VRPYLI+               
Sbjct: 42  HKRFNLVKATVDGSPSPGLYSAKQFELTPENVDMVLEDVRPYLISDGGNVEVVSVEDGVV 101

Query: 406 XLKLQG 423
            L+LQG
Sbjct: 102 SLQLQG 107


>ref|XP_003625999.1| NifU-like protein [Medicago truncatula] gi|355501014|gb|AES82217.1|
           NifU-like protein [Medicago truncatula]
           gi|388517667|gb|AFK46895.1| unknown [Medicago
           truncatula]
          Length = 216

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
 Frame = +1

Query: 199 SFVALNFRQLKQNHRKLNVVKASSAS--------GLYSADQFELTSENVDKVLDNVRPYL 354
           +F   NF+  KQN R    V  SS++        GLYSA +FELT+ NVD VL++VRPYL
Sbjct: 26  NFPLFNFKIAKQNSRTSTTVIRSSSTANQNQSSPGLYSAQKFELTASNVDLVLEDVRPYL 85

Query: 355 IAXXXXXXXXXXXXXXXXLKLQG 423
           I+                LKLQG
Sbjct: 86  ISDGGNVDVVSVENGVVSLKLQG 108


>ref|XP_006649983.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Oryza
           brachyantha]
          Length = 222

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
 Frame = +1

Query: 163 FKLPKIESPKSQSFVALNFRQLKQNHRKLNVVK------ASSAS-------GLYSADQFE 303
           F  P+I    +QS + L  R+L+    K+   +      A+SAS       GLYSA+ F+
Sbjct: 14  FLRPQIRLRITQSSLPLPLRRLQFGPSKIQTSRTPAHLAAASASTPPAAGGGLYSAETFQ 73

Query: 304 LTSENVDKVLDNVRPYLIAXXXXXXXXXXXXXXXXLKLQG 423
           LT+ENVD+VLD+VRPYLIA                LKL+G
Sbjct: 74  LTAENVDRVLDDVRPYLIADGGDVSVASVEDGVISLKLEG 113


>ref|XP_002301529.1| nitrogen fixation NifU-like family protein [Populus trichocarpa]
           gi|222843255|gb|EEE80802.1| nitrogen fixation NifU-like
           family protein [Populus trichocarpa]
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
 Frame = +1

Query: 151 LIPSF-KLPKIESPKSQSFVALNF------RQLKQNHRKLNVVKASSASGLYSADQFELT 309
           + PSF K+P   SP+S +            R   +   K      SS+ GLYSA QFEL 
Sbjct: 12  ITPSFPKIPSTNSPQSLTIKQRTLLPGTGRRIFHKTAIKATAPTGSSSPGLYSAQQFELN 71

Query: 310 SENVDKVLDNVRPYLIAXXXXXXXXXXXXXXXXLKLQG 423
            +NVD VL+ VRPYLIA                LKLQG
Sbjct: 72  PQNVDLVLEEVRPYLIADGGNVDVVSVEDGVISLKLQG 109


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