BLASTX nr result

ID: Rehmannia23_contig00011397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011397
         (909 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628568.1| Replication factor A protein [Medicago trunc...    40   1e-05

>ref|XP_003628568.1| Replication factor A protein [Medicago truncatula]
           gi|355522590|gb|AET03044.1| Replication factor A protein
           [Medicago truncatula]
          Length = 559

 Score = 40.0 bits (92), Expect(2) = 1e-05
 Identities = 23/55 (41%), Positives = 30/55 (54%)
 Frame = -1

Query: 540 GDRIQETVRRFQIDQFKKILKEGRVYAIRDFIIANQIDKYKATTSKHKIFFHGRT 376
           G +IQ  VR+  I  F+K L+EG VY I  F +A     Y+A T  +KI F   T
Sbjct: 51  GVKIQAIVRKQLIYVFQKRLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTT 105



 Score = 36.6 bits (83), Expect(2) = 1e-05
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = -3

Query: 757 MAPMITLIHDLNMTKMQWVVKLRLIRLYEKPAYNDRNQIQSLECVFHD 614
           M   + L++D+   ++ W +++R++R++E P +   NQ  SLE V  D
Sbjct: 1   MDKSLDLVNDIVPGRLNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLD 48


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