BLASTX nr result

ID: Rehmannia23_contig00011327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011327
         (412 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078114.1| RING/U-box domain-containing protein [Arabid...    57   2e-06
ref|NP_001030648.2| RING/U-box domain-containing protein [Arabid...    57   2e-06
gb|AAM65991.1| unknown [Arabidopsis thaliana]                          57   2e-06
ref|NP_566281.1| RING/U-box domain-containing protein [Arabidops...    57   2e-06
gb|ESW19845.1| hypothetical protein PHAVU_006G160100g [Phaseolus...    56   6e-06
ref|XP_006407960.1| hypothetical protein EUTSA_v10020737mg [Eutr...    55   7e-06
ref|XP_006407959.1| hypothetical protein EUTSA_v10020737mg [Eutr...    55   7e-06
ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...    55   1e-05

>ref|NP_001078114.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|222423602|dbj|BAH19770.1| AT3G06330 [Arabidopsis
           thaliana] gi|332640856|gb|AEE74377.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 363

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 210 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 265

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q++Q +PVTL R  T N
Sbjct: 266 QVVQNLPVTLVRVPTPN 282


>ref|NP_001030648.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332640855|gb|AEE74376.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 257

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 41  EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 96

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q++Q +PVTL R  T N
Sbjct: 97  QVVQNLPVTLVRVPTPN 113


>gb|AAM65991.1| unknown [Arabidopsis thaliana]
          Length = 424

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 208 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 263

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q++Q +PVTL R  T N
Sbjct: 264 QVVQNLPVTLVRVPTPN 280


>ref|NP_566281.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6437553|gb|AAF08580.1|AC011623_13 unknown protein
           [Arabidopsis thaliana]
           gi|16226607|gb|AAL16212.1|AF428443_1 AT3g06330/F24P17_21
           [Arabidopsis thaliana] gi|22137116|gb|AAM91403.1|
           At3g06330/F24P17_21 [Arabidopsis thaliana]
           gi|70905077|gb|AAZ14064.1| At3g06330 [Arabidopsis
           thaliana] gi|332640854|gb|AEE74375.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 426

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 210 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 265

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q++Q +PVTL R  T N
Sbjct: 266 QVVQNLPVTLVRVPTPN 282


>gb|ESW19845.1| hypothetical protein PHAVU_006G160100g [Phaseolus vulgaris]
          Length = 422

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLK-KEDGKCSVCE 228
           +IPEEEA+C +C+ +     ++ +  +  C CK  L  +HE C  +    K D KC VC 
Sbjct: 206 EIPEEEAVCRICFDVC----DERNTFKMECSCKGDLRLVHEECLIKWFSTKRDKKCDVCR 261

Query: 227 QLIQCIPVTLSRTST 183
           Q +Q +PVTL R ++
Sbjct: 262 QEVQNLPVTLLRVTS 276


>ref|XP_006407960.1| hypothetical protein EUTSA_v10020737mg [Eutrema salsugineum]
           gi|557109106|gb|ESQ49413.1| hypothetical protein
           EUTSA_v10020737mg [Eutrema salsugineum]
          Length = 443

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 227 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAIKWFSTKGTRTCDVCR 282

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q +Q +PVTL R  T N
Sbjct: 283 QEVQNLPVTLLRVPTTN 299


>ref|XP_006407959.1| hypothetical protein EUTSA_v10020737mg [Eutrema salsugineum]
           gi|557109105|gb|ESQ49412.1| hypothetical protein
           EUTSA_v10020737mg [Eutrema salsugineum]
          Length = 320

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 104 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAIKWFSTKGTRTCDVCR 159

Query: 227 QLIQCIPVTLSRTSTHN 177
           Q +Q +PVTL R  T N
Sbjct: 160 QEVQNLPVTLLRVPTTN 176


>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -3

Query: 398 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 228
           +IPEEEA+C +C  +     E+ + L+  C CK +L  +HE CA +    +  K C VC 
Sbjct: 213 EIPEEEAVCRICLEVC----EEGNTLKMECSCKGALRLLHEDCAIKWFTTKGNKTCDVCR 268

Query: 227 QLIQCIPVTLSRTST 183
           Q +Q +PVTL R  T
Sbjct: 269 QEVQNLPVTLLRVPT 283


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