BLASTX nr result
ID: Rehmannia23_contig00011237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00011237
(784 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 200 5e-49
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 186 8e-45
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 183 7e-44
gb|EOY04207.1| RNA-binding KH domain-containing protein isoform ... 167 5e-39
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ... 167 5e-39
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ... 165 1e-38
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 162 9e-38
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 154 3e-35
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 154 4e-35
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 145 2e-32
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ... 133 8e-29
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ... 133 8e-29
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 129 9e-28
gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [... 126 1e-26
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5... 117 6e-24
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 111 2e-22
ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g... 80 1e-12
gb|ADE76820.1| unknown [Picea sitchensis] 79 2e-12
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 75 3e-11
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 75 3e-11
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 200 bits (508), Expect = 5e-49
Identities = 129/288 (44%), Positives = 159/288 (55%), Gaps = 44/288 (15%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV SK++ KP+CAS DEELVQISGS G+A+DALVEI+SRLR RCLRD N
Sbjct: 421 NEMRRRTQADIRVLSKDD-KPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSFP--PRA 429
++ E VRPLPGF P+ + R G S + GS RYEHL+ +VREYD PS+P P A
Sbjct: 480 SKVESTPVRPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIA 539
Query: 428 TGYLDVN--------EAKYSSVSAAAGSRIAEFGGRRLSLHDPYSSGSDF-----GTSE- 291
T + ++ + Y S G I EF GR DP S G F GTS+
Sbjct: 540 TRFSNIRSPPEMKFPDHSYGSAKGTGGYNIDEFAGRSARFQDPRSVGPGFIDDIRGTSDH 599
Query: 290 ------------QHFNSSRDIYRAPASP----------PVPHNY-SQPGAYQSYNSPHVA 180
++FN+ R ++ SP NY +Q AYQSY P
Sbjct: 600 MNAGHNVFHGSSENFNAGRPTFQGYGSPAGQSSNIQQGAYHQNYAAQQSAYQSY--PAKG 657
Query: 179 AYPNDSPSPVPYQNPNRLPAAYQNKYTLQGS-----YQDTRAYGSYRY 51
YP+ SPS +PYQNPN A YQN + Q YQ+ A GSY Y
Sbjct: 658 GYPSGSPSQLPYQNPNPHQAPYQNINSQQHQQAPPPYQNMAAQGSYHY 705
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 186 bits (472), Expect = 8e-45
Identities = 125/290 (43%), Positives = 154/290 (53%), Gaps = 46/290 (15%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV SK+E KP+CAS DEELVQISGS G+A+DALVEI+SRLR RCLRD N
Sbjct: 421 NEMRRRTQADIRVLSKDE-KPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSFP--PRA 429
++ E VRPLPGF P+ + R S + GS RYEHL+ +VRE D PS+P P A
Sbjct: 480 SKVESTHVRPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIA 539
Query: 428 TGYLDVN--------EAKYSSVSAAAGSRIAEFGGRRLSLHDPYSSGSDF-----GTSE- 291
T + + + Y + G I EF G DP S G F GTS+
Sbjct: 540 TRFSNTRSPPEMKFPDHSYGTAKGTGGYNIDEFAGSSARYQDPRSIGPGFVDDIRGTSDR 599
Query: 290 ------------QHFNSSRDIYRAPASP----------PVPHNY-SQPGAYQSYNSPHVA 180
++ N+ R ++ SP NY +Q AYQSY P
Sbjct: 600 MNAGHNVFHGSSENLNAGRPTFQGYGSPAGQSSNIHQGAYHQNYAAQQSAYQSY--PAKG 657
Query: 179 AYPNDSPSPVPYQNPNRLPAAYQNKYTLQGS-------YQDTRAYGSYRY 51
YP+ SPS +PYQNPN A YQN + Q YQ+ A GSY Y
Sbjct: 658 GYPSGSPSQLPYQNPNPHQAPYQNINSQQHQHQQAPPPYQNMAAQGSYHY 707
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 183 bits (464), Expect = 7e-44
Identities = 122/259 (47%), Positives = 155/259 (59%), Gaps = 25/259 (9%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SKE+ KPKCAS DEELVQISG+FG+A+DAL EIASRLR RCLRD N
Sbjct: 419 NEMRRRTQADIRVYSKED-KPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDAN 477
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIV-PGSLGRYEHLQDSVREYDPPSF--PPR 432
EPA V P+PGFG G L GGLP SS + GS G +E + EY+P S+ PP
Sbjct: 478 GGVEPAPVGPVPGFGHPGKL-PGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPA 536
Query: 431 ATGYLDVNEAKYS-----SVSAAAG------SRIAEFGGRRLSLHDPYSSGS----DFGT 297
ATGY +VN + S SVS+ G + ++E G R+ L DP S GS +
Sbjct: 537 ATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRG 596
Query: 296 SEQHFNSSRDI---YRAPASPPVPHNYSQPGAYQSYNSPHVAAYPN-DSPSPVPYQNPNR 129
S +H +++ I + A A + Q G+YQ+ ++ A Y N ++P VPYQ+ N
Sbjct: 597 SSEHLTAAQSILQAFMASAGAGGQNMNPQQGSYQNMSAHPQAPYQNMNAPPQVPYQSMNA 656
Query: 128 LP---AAYQNKYTLQGSYQ 81
P AAY N Q SYQ
Sbjct: 657 PPQQAAAYPNMSAQQSSYQ 675
>gb|EOY04207.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 167 bits (422), Expect = 5e-39
Identities = 112/251 (44%), Positives = 150/251 (59%), Gaps = 16/251 (6%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 244 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVN 302
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPP 435
E A V P+ GFGPA ++ GLP ++ I PG G YE + REY+P S PP
Sbjct: 303 AGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPP 361
Query: 434 RATGYLDVN---EAKY-----SSVSAAAGSRI--AEFGGRRLSLHDPYSSGS-DFGTSEQ 288
A Y ++N EAK SSV+ GS I +E G R+ L DP + GS +F S +
Sbjct: 362 AAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSEEFRGSSE 421
Query: 287 HFNSSRDIYRAPASPPVPHNYSQPGAYQSYNSPHVAAYPNDSPSPVPYQNPNRLPAAYQN 108
H +++ I+++ +Q +YQ+ S ++Y N + PY N N + YQN
Sbjct: 422 HLTAAQSIFQSFMPSSGQSMNAQQSSYQNL-SVQQSSYLNMNAQRSPYPNMNAQQSPYQN 480
Query: 107 KYTLQGS-YQD 78
++ Q S YQ+
Sbjct: 481 RHPHQSSPYQN 491
>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 167 bits (422), Expect = 5e-39
Identities = 112/251 (44%), Positives = 150/251 (59%), Gaps = 16/251 (6%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 420 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVN 478
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPP 435
E A V P+ GFGPA ++ GLP ++ I PG G YE + REY+P S PP
Sbjct: 479 AGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPP 537
Query: 434 RATGYLDVN---EAKY-----SSVSAAAGSRI--AEFGGRRLSLHDPYSSGS-DFGTSEQ 288
A Y ++N EAK SSV+ GS I +E G R+ L DP + GS +F S +
Sbjct: 538 AAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSEEFRGSSE 597
Query: 287 HFNSSRDIYRAPASPPVPHNYSQPGAYQSYNSPHVAAYPNDSPSPVPYQNPNRLPAAYQN 108
H +++ I+++ +Q +YQ+ S ++Y N + PY N N + YQN
Sbjct: 598 HLTAAQSIFQSFMPSSGQSMNAQQSSYQNL-SVQQSSYLNMNAQRSPYPNMNAQQSPYQN 656
Query: 107 KYTLQGS-YQD 78
++ Q S YQ+
Sbjct: 657 RHPHQSSPYQN 667
>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 165 bits (418), Expect = 1e-38
Identities = 111/251 (44%), Positives = 149/251 (59%), Gaps = 16/251 (6%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 420 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVN 478
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPP 435
E A V P+ GFGPA ++ GLP ++ I PG G YE + REY+P S PP
Sbjct: 479 AGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPP 537
Query: 434 RATGYLDVN---EAKY-----SSVSAAAGSRI--AEFGGRRLSLHDPYSSGS-DFGTSEQ 288
A Y ++N EAK SSV+ GS I + G R+ L DP + GS +F S +
Sbjct: 538 AAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNTQVSGARVRLEDPQTGGSEEFRGSSE 597
Query: 287 HFNSSRDIYRAPASPPVPHNYSQPGAYQSYNSPHVAAYPNDSPSPVPYQNPNRLPAAYQN 108
H +++ I+++ +Q +YQ+ S ++Y N + PY N N + YQN
Sbjct: 598 HLTAAQSIFQSFMPSSGQSMNAQQSSYQNL-SVQQSSYLNMNAQRSPYPNMNAQQSPYQN 656
Query: 107 KYTLQGS-YQD 78
++ Q S YQ+
Sbjct: 657 RHPHQSSPYQN 667
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 162 bits (411), Expect = 9e-38
Identities = 106/224 (47%), Positives = 136/224 (60%), Gaps = 21/224 (9%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SKE+ KPKCAS DEELVQISG+FG+A+DAL EIASRLR RCLRD N
Sbjct: 447 NEMRRRTQADIRVYSKED-KPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDAN 505
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIV-PGSLGRYEHLQDSVREYDPPSF--PPR 432
EPA V P+PGFG G L GGLP SS + GS G +E + EY+P S+ PP
Sbjct: 506 GGVEPAPVGPVPGFGHPGKL-PGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPA 564
Query: 431 ATGYLDVNEAKYS-----SVSAAAG------SRIAEFGGRRLSLHDPYSSGS----DFGT 297
ATGY +VN + S SVS+ G + ++E G R+ L DP S GS +
Sbjct: 565 ATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRG 624
Query: 296 SEQHFNSSRDI---YRAPASPPVPHNYSQPGAYQSYNSPHVAAY 174
S +H +++ I + A A + Q G+YQ+ ++ A Y
Sbjct: 625 SSEHLTAAQSILQAFMASAGAGGQNMNPQQGSYQNMSAHPQAPY 668
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 154 bits (389), Expect = 3e-35
Identities = 107/264 (40%), Positives = 136/264 (51%), Gaps = 31/264 (11%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 422 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDAN 480
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSF------ 441
EPA V P+ G AG L G S + G G YE + +Y+P S+
Sbjct: 481 VGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQSYPPPPSA 539
Query: 440 -PPRATGYLDVNEA--------KYSSVSAAAGSRIAEFG---GRRLSLHDPYSSGS---- 309
PP ATGY ++N A SV GS I G G R+ L DP+ S
Sbjct: 540 PPPSATGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECIV 599
Query: 308 DFGTSEQHFNSSRDIYRAPASPPVPHNYSQPGAYQSYN---------SPHVAAYPNDSPS 156
D S +H S+ Y++ + QP +YQ+ N S H ++Y N +
Sbjct: 600 DIRGSSEHLISAHGTYQSFMTSGQSMKV-QPSSYQNINPQQSSYQTMSSHQSSYQNMNTQ 658
Query: 155 PVPYQNPNRLPAAYQNKYTLQGSY 84
PY + N + YQN Q SY
Sbjct: 659 QSPYHSVNAQQSPYQNINPQQSSY 682
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 154 bits (388), Expect = 4e-35
Identities = 106/259 (40%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 422 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDAN 480
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSF--PPRA 429
EPA V P+ G AG L G S + G G YE + +Y+P S+ PP A
Sbjct: 481 VGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQSYPPPPSA 539
Query: 428 TGYLDVNEA--------KYSSVSAAAGSRI---AEFGGRRLSLHDPYSSGS----DFGTS 294
GY ++N A SV GS I E G R+ L DP+ S D S
Sbjct: 540 MGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDIRGS 599
Query: 293 EQHFNSSRDIYRAPASPPVPHNYSQPGAYQSYN---------SPHVAAYPNDSPSPVPYQ 141
+H S+ Y++ + QP +YQ+ N S H ++Y N + PY
Sbjct: 600 SEHLISAHGTYQSFMTSGQSMKV-QPSSYQNINPQQSSYQTMSSHQSSYQNMNTQQSPYH 658
Query: 140 NPNRLPAAYQNKYTLQGSY 84
+ N + YQN Q SY
Sbjct: 659 SVNAQQSPYQNINPQQSSY 677
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 145 bits (366), Expect = 2e-32
Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 19/239 (7%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ +PKCA DEELVQISG+F +A+DAL EI SRLR R LRD N
Sbjct: 417 NEMRRRTQADIRVYSKDD-RPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRDTN 475
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVS-SNIVPGSLGRYEHLQDSVREYDPPSF--PPR 432
E A V P P FGP G+L G+P S + GS GRY+HL+ EY+P + PP
Sbjct: 476 AGEEHAPVGPPPRFGPPGSLPVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPA 535
Query: 431 ATGYLDVNEA-----------KYSSVSAAAGSRIAEFGGRRLSLHDPYSSG----SDFGT 297
A+GY VN A ++ + + S I E R+ D S G ++
Sbjct: 536 ASGYQRVNRALDSRIPNNAVGSFTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRG 595
Query: 296 SEQHFNSSRDIYRAPASPPVPHNYSQPGAYQSYNSPHVAAYPNDSPSPVPYQ-NPNRLP 123
S+Q N++++I +A + + +QP ++ + N+ +YPN S PY N R P
Sbjct: 596 SDQ-LNAAQNILQALMASMGQNASAQPSSHHNANT-RQGSYPNISDHQSPYHINAPRSP 652
>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma
cacao]
Length = 591
Score = 133 bits (334), Expect = 8e-29
Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 12/152 (7%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 420 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVN 478
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPP 435
E A V P+ GFGPA ++ GLP ++ I PG G YE + REY+P S PP
Sbjct: 479 AGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPP 537
Query: 434 RATGYLDVN---EAKY-----SSVSAAAGSRI 363
A Y ++N EAK SSV+ GS I
Sbjct: 538 AAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
cacao]
Length = 580
Score = 133 bits (334), Expect = 8e-29
Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 12/152 (7%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 420 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVN 478
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPP 435
E A V P+ GFGPA ++ GLP ++ I PG G YE + REY+P S PP
Sbjct: 479 AGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPP 537
Query: 434 RATGYLDVN---EAKY-----SSVSAAAGSRI 363
A Y ++N EAK SSV+ GS I
Sbjct: 538 AAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 129 bits (325), Expect = 9e-28
Identities = 73/123 (59%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK+E KPKCAS DEELVQISG FG+A+DAL EIASRLR R LRD N
Sbjct: 418 NEMRRRTQADIRVYSKDE-KPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVN 476
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSF--PPRA 429
EP V P+ GFG A +L G G S + S G YE L+D+ EY+ S+ PP A
Sbjct: 477 AGAEPGPVGPIQGFGAARSLPGRG--SSGMMGASSSGGYEPLRDTEHEYESHSYPVPPAA 534
Query: 428 TGY 420
GY
Sbjct: 535 VGY 537
>gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 126 bits (316), Expect = 1e-26
Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ +P+CA+ DEELVQISG+FG+A+DAL EI SRLR R LRD N
Sbjct: 422 NEMRRRTQADIRVYSKDD-RPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRDAN 480
Query: 602 TRGEPASVRPLPGFGPAGNLRGGG-LPVSSNIVPGSLGRYEHLQDSVREYDPPSF--PPR 432
EPA V P GFG AG++ GGG S + GS RY+ L+ EY+ S+ P
Sbjct: 481 AGAEPALVGPAHGFGLAGSVPGGGPRQPPSAVGAGSSSRYDPLKVGRHEYELQSYRIPST 540
Query: 431 ATGYLDVNEA 402
A+GY VN A
Sbjct: 541 ASGYPSVNHA 550
>ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|566171617|ref|XP_006383459.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 117 bits (292), Expect = 6e-24
Identities = 62/103 (60%), Positives = 72/103 (69%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRR ADIRV+ K + KPKCAS DEELVQISG++G+A+DAL EIASRLR R LRD N
Sbjct: 416 NEMRRRLQADIRVYPKND-KPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDAN 474
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ 474
EP P+PGFGPA NL G G S + S G YE L+
Sbjct: 475 AGTEPGPAGPVPGFGPARNLPGRGPQPSGMMAASSSGGYEPLR 517
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 111 bits (278), Expect = 2e-22
Identities = 63/108 (58%), Positives = 73/108 (67%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
N+MRRRT ADIRV+SK++ KPKCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N
Sbjct: 422 NEMRRRTQADIRVYSKDD-KPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDAN 480
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVRE 459
EPA V P+ G AG L G S + G G YE + S E
Sbjct: 481 VGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRVSQYE 528
>ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 79.7 bits (195), Expect = 1e-12
Identities = 76/226 (33%), Positives = 97/226 (42%)
Frame = -3
Query: 779 DMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDENT 600
+MRRR A+IRV+SK + KPK S DEELVQ++G IARDAL EIASRLRTR LRD +
Sbjct: 406 EMRRRIGAEIRVYSKAD-KPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTLRDGGS 464
Query: 599 RGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSFPPRATGY 420
P + P GP G +I P + R +PP P
Sbjct: 465 GNNPLPL--APSDGPRG-----------DIFPS-----REFTQNGRPANPPYGRP----- 501
Query: 419 LDVNEAKYSSVSAAAGSRIAEFGGRRLSLHDPYSSGSDFGTSEQHFNSSRDIYRAPASPP 240
N++ Y RRL++ PY G S ++ IY PA+ P
Sbjct: 502 --ANDSPY----------------RRLAIDQPY--GRPASDSLYGMPANDPIYGRPANDP 541
Query: 239 VPHNYSQPGAYQSYNSPHVAAYPNDSPSPVPYQNPNRLPAAYQNKY 102
Y +P N P ND P P P+ +AY Y
Sbjct: 542 ---PYGRPA-----NDPPYGRPANDIPYGRPANKPHDPSSAYPIDY 579
>gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 79.0 bits (193), Expect = 2e-12
Identities = 58/163 (35%), Positives = 82/163 (50%)
Frame = -3
Query: 782 NDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDEN 603
++MR+RT A+IR+ SK+ PKCA +EELVQ+ G +AR+AL++IA+RLR+ +D++
Sbjct: 106 SEMRKRTRANIRIMSKDNI-PKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQD 164
Query: 602 TRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSFPPRATG 423
SV P P+ +L G G+P S GR + L + R Y PS T
Sbjct: 165 GGSNAGSVVP-----PSLSLYGRGVPDS------GFGRGDELGSTGRMYSLPSLGLEGTA 213
Query: 422 YLDVNEAKYSSVSAAAGSRIAEFGGRRLSLHDPYSSGSDFGTS 294
+YSS S GG + Y S S F TS
Sbjct: 214 -----SGRYSSAS------YGSLGGVQNGGAGGYGSFSSFSTS 245
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 75.1 bits (183), Expect = 3e-11
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = -3
Query: 779 DMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDENT 600
+MRRRT A+IRV+SK + KPK S DEELVQ++G IAR AL EIASRLRTR LRD ++
Sbjct: 402 EMRRRTGAEIRVYSKAD-KPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSS 460
Query: 599 RGEPASVRPLPG 564
P P G
Sbjct: 461 SNNPTPFAPFDG 472
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein
[Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 75.1 bits (183), Expect = 3e-11
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = -3
Query: 779 DMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDENT 600
+MRRRT A+IRV+SK + KPK S DEELVQ++G IAR AL EIASRLRTR LRD ++
Sbjct: 402 EMRRRTGAEIRVYSKAD-KPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSS 460
Query: 599 RGEPASVRPLPG 564
P P G
Sbjct: 461 SNNPTPFAPFDG 472