BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011126
         (1068 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   438   e-120
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...   413   e-113
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe...   411   e-112
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 409   e-111
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom...   405   e-110
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom...   405   e-110
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   404   e-110
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 400   e-109
gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial ...   397   e-108
gb|EMJ00160.1| hypothetical protein PRUPE_ppa020671mg, partial [...   393   e-107
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe...   392   e-106
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     392   e-106
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]   388   e-105
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   386   e-105
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   386   e-105
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              385   e-104
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        385   e-104
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         383   e-104
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   383   e-104
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  382   e-103

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  438 bits (1126), Expect = e-120
 Identities = 202/355 (56%), Positives = 275/355 (77%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +RPGDEWK++FKT++GL+EWLVMPFGL+NAPSTFMR+M Q+L+P IG  VVVYFDDIL+Y
Sbjct: 723  IRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIY 782

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S+S +DH  HL+ V++ LR+E+ +    KC F+S  ++FLG+ +S+ G+  D  K+ AI 
Sbjct: 783  SRSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIV 842

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            DWP  T++  VRSFHG+A+FY+RF+R+FSSIMAPIT+CM    F WT AA+ AF EIK K
Sbjct: 843  DWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSK 902

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            +   P+L LPDF + FE++CDAS VGIGAVLSQ GHP+A+FSEKLNG + +YSTYD+EFY
Sbjct: 903  MVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFY 962

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            AVV+A+RH++HYL ++EF+LY++HEAL++L++Q  L++RHA WS +LQ FTF +KH AG 
Sbjct: 963  AVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGI 1022

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGEQMDFIN 1067
             N+V DALSR++LLL +M  + +GF+  K  Y  D  F D+ S L  G +   I+
Sbjct: 1023 ENKVADALSRKALLLVNMSTTTIGFEELKHCYDNDADFGDVYSSLLSGSKATCID 1077


>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  413 bits (1061), Expect = e-113
 Identities = 193/354 (54%), Positives = 262/354 (74%), Gaps = 1/354 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +RPGDEWK+AFK+++GLFEWLVMPFGLSN PSTFMR+MNQ+LRP IG+ VVVYFDDIL+Y
Sbjct: 726  IRPGDEWKTAFKSKDGLFEWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIY 785

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + ++HL HL+ VL +LR  ++F    KC F + ++LFLG+ +   GI VD  K+ AI 
Sbjct: 786  STTKEEHLVHLRQVLDVLRENKLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAIL 845

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            DWP   +++ VRSFHGLA+FY+RFVRHFSSI+APIT+C+    F W    + +F +IK K
Sbjct: 846  DWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEK 905

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            L  APVL LP+F + FE+ CDAS VG+GAVLSQ   P+A+FSEKL+  R ++STYD EFY
Sbjct: 906  LCTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFY 965

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            AVVRA++ + HYL  +EF+L+T+H+ALK++++Q ++   HA W  +LQ+F+FVIKH +G 
Sbjct: 966  AVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGK 1025

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDI-LSCLHEGEQMDF 1061
             NRV DALSRR+ LL  +   +VGF+  K+LY  D  F +I   C ++    D+
Sbjct: 1026 TNRVADALSRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKCTNQEPMADY 1079


>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  411 bits (1057), Expect = e-112
 Identities = 192/354 (54%), Positives = 261/354 (73%), Gaps = 1/354 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +RPGDEWK+AFK+++GLFEWLVMPFGLSNAPSTFMR+MNQ+LRP IG+ VVVYFDDIL+Y
Sbjct: 734  IRPGDEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIY 793

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + ++HL HL+ VL +LR  +++    KC F + ++LFLG+ +   GI VD  K+ AI 
Sbjct: 794  STTKEEHLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAIL 853

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            DWP   +++ VRSFHGLA+FY RFVRHFSSI APIT+C+    F W    + +F +IK K
Sbjct: 854  DWPAPKTVSEVRSFHGLATFYMRFVRHFSSIAAPITECLKKGRFSWGEEQERSFADIKEK 913

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            L  APVL LP+F + FE+ CDAS VG+GAVL Q   P+A+FSEKL+  R ++STYD EFY
Sbjct: 914  LCTAPVLALPNFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFY 973

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            AVVRA++ + HYL  +EF+L+T+H+ALK++++Q ++   HA W  +LQ+F+FVIKH +G 
Sbjct: 974  AVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGK 1033

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDI-LSCLHEGEQMDF 1061
             NRV DALSRR+ LL  +   +VGF+  K+LY  D  F++I   C ++    D+
Sbjct: 1034 TNRVADALSRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMTDY 1087


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  409 bits (1050), Expect = e-111
 Identities = 191/340 (56%), Positives = 254/340 (74%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +R GDEWK+AFKT+ GL+EWLVMPFGLSNAPSTFMR+M ++LRP +G   VVYFDDILVY
Sbjct: 716  IREGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVY 775

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SK+  +HL HL+ V +ILR ++++    KC F+ E + FLGY IS  GISVDQ  +AA++
Sbjct: 776  SKTKGEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQ 835

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
             WPT T++T VRSFHGLASFY+RF+++FS+++APIT+CM    FQWT  A  +F +IK  
Sbjct: 836  SWPTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQL 895

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            +   P+L LPDF + FE+ CDAS VGIGAVL Q   P+AYFSEKLNG +++YSTYD EFY
Sbjct: 896  MCNTPILKLPDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFY 955

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A++RA+ H+ HYL  + F+L+++HEALK+++ Q  L+ RHA W  +LQ FTF  K++ G 
Sbjct: 956  AIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGK 1015

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKD 1022
             N V DALSRR  LL+ M   ++GF+  K+LY  DP F +
Sbjct: 1016 KNVVADALSRRHSLLSVMSNRVLGFEFMKELYKEDPDFSE 1055


>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 786

 Score =  405 bits (1042), Expect = e-110
 Identities = 188/352 (53%), Positives = 261/352 (74%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +R GDEWK+AFKT +GLFEWLVMPFGLSNAPSTFMRVM ++L+P + + VVVYFDDIL+Y
Sbjct: 93   MRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIY 152

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + + HL HL+ VL++L+ EQ++    KC F+   ++FLG+ +SA G+  D  K+ AI 
Sbjct: 153  SHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 212

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            +WP  TS+  VRSFHGLASFY+RF+R+FSSIM+PIT+ +    F+W+ +A  AF  +K  
Sbjct: 213  EWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKAL 272

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            ++EAPVL LPDF + F + CDAS VGIGAVLSQ G PI +FSEKL   R RYSTYD+EFY
Sbjct: 273  MTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFY 332

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A+VRA+RH++HYL ++EF +Y++H+AL++L +Q  LS +HA WS +L +F F +K+++G 
Sbjct: 333  ALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQ 392

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGEQMD 1058
             N V DALSRR  +L+ M   + GF+  K+ Y++D +F  I++ L    Q +
Sbjct: 393  SNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAE 444


>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  405 bits (1042), Expect = e-110
 Identities = 188/352 (53%), Positives = 261/352 (74%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +R GDEWK+AFKT +GLFEWLVMPFGLSNAPSTFMRVM ++L+P + + VVVYFDDIL+Y
Sbjct: 641  MRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIY 700

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + + HL HL+ VL++L+ EQ++    KC F+   ++FLG+ +SA G+  D  K+ AI 
Sbjct: 701  SHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 760

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            +WP  TS+  VRSFHGLASFY+RF+R+FSSIM+PIT+ +    F+W+ +A  AF  +K  
Sbjct: 761  EWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKAL 820

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            ++EAPVL LPDF + F + CDAS VGIGAVLSQ G PI +FSEKL   R RYSTYD+EFY
Sbjct: 821  MTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFY 880

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A+VRA+RH++HYL ++EF +Y++H+AL++L +Q  LS +HA WS +L +F F +K+++G 
Sbjct: 881  ALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQ 940

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGEQMD 1058
             N V DALSRR  +L+ M   + GF+  K+ Y++D +F  I++ L    Q +
Sbjct: 941  SNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAE 992


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  404 bits (1039), Expect = e-110
 Identities = 182/310 (58%), Positives = 248/310 (80%)
 Frame = +3

Query: 3   LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
           +RPGDEWK+AFKT++GL+EW+VMPFGL+NAPSTFMRVM Q+LRP +G  +VVYFDDIL+Y
Sbjct: 49  IRPGDEWKTAFKTKDGLYEWMVMPFGLTNAPSTFMRVMTQVLRPFMGKFLVVYFDDILIY 108

Query: 183 SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
           SKS++ H+ HL  V   LR E++FA P KC+F++++++FLG+ +S+ G+S D  KV AI 
Sbjct: 109 SKSLEHHIDHLSQVCLTLRKEKLFANPKKCVFMTDQVIFLGFVVSSQGVSADPQKVQAIV 168

Query: 363 DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
           +WP   S+  VRSFHGLA+FY+RF++ FS IMAPITDC+    F+W+  A  AF EIK +
Sbjct: 169 EWPEPRSIRDVRSFHGLATFYRRFIKEFSVIMAPITDCLKKEEFRWSEEAATAFKEIKQR 228

Query: 543 LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
           +++APV+ LPDFS+ FE++CDAS +GIG VLSQ  HPIAYFS KL+G ++ YSTYD EFY
Sbjct: 229 MTDAPVMRLPDFSKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFY 288

Query: 723 AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
           AVV+++RH+RHYL  QEF++Y++HEAL++L++Q  L+AR A W  +LQ +T+ +KH AG 
Sbjct: 289 AVVQSLRHWRHYLLPQEFVIYSDHEALRYLNSQKKLNARRARWVEFLQDYTYTLKHMAGV 348

Query: 903 INRVVDALSR 932
            N+V DALSR
Sbjct: 349 ENKVADALSR 358


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  400 bits (1027), Expect = e-109
 Identities = 191/349 (54%), Positives = 254/349 (72%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGLSNAPSTFMR+M ++LRP +G  VVVYFDDILVY
Sbjct: 704  IKEGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDILVY 763

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S S ++HL HLQ + + LR  +++    KC F+   + FLG+ IS  GI VDQ KV AIK
Sbjct: 764  SPSKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIK 823

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
             WP   ++T VRSFHGLASFY+RF++ FS++MAPIT+CM    F+W   A+++FN IK K
Sbjct: 824  SWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGEFKWGDKAESSFNIIKEK 883

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            L E+P+L LP+F++ FE+ CDAS +GIGAVL Q   PIAYFSEKL+G ++ YSTYD EFY
Sbjct: 884  LCESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFY 943

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A+VRA+ H+ HYL  + F+L+++HEALK+++ Q  L+ RHA W  +LQ F F  K+  G 
Sbjct: 944  AIVRALNHWSHYLKPRPFVLHSDHEALKYINGQHKLNHRHAKWVEFLQSFNFSSKYIEGK 1003

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGE 1049
             N V DALSRR ++L+ M   ++GF+  K+LY  DP FK     L  G+
Sbjct: 1004 DNIVADALSRRFIMLSFMEQRVLGFEYMKELYVEDPDFKGEWELLQSGQ 1052


>gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  397 bits (1020), Expect = e-108
 Identities = 184/352 (52%), Positives = 257/352 (73%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +R GDEWK+AFKT +GLFEWLVMPFGLSNAPSTFMRVM ++L+P + + VVVYFDDIL+Y
Sbjct: 93   MRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIY 152

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + + HL HL+ VL++L+ EQ++    KC F+   ++FLG+ +SA G+  D  K+ AI 
Sbjct: 153  SHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 212

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            +WP  TS+  VRSFHGLASFY+RF+R+FSSIM+PIT+ +    F+W+ +A  AF  +K  
Sbjct: 213  EWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKAL 272

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            ++EAPVL LPDF + F + CDAS VG    LSQ G PI +FSEKL   R RYSTYD+EFY
Sbjct: 273  MTEAPVLALPDFEKLFVVECDASYVGXXXXLSQDGRPIEFFSEKLTDSRRRYSTYDLEFY 332

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A+VRA+RH++HYL ++EF +Y++H+AL++L +Q  LS +HA WS +L +F F +K+++G 
Sbjct: 333  ALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQ 392

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGEQMD 1058
             N V DALSRR  +L+ M   + GF+  K+ Y++D +F  I++ L    Q +
Sbjct: 393  SNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAE 444


>gb|EMJ00160.1| hypothetical protein PRUPE_ppa020671mg, partial [Prunus persica]
          Length = 1460

 Score =  393 bits (1009), Expect = e-107
 Identities = 185/310 (59%), Positives = 241/310 (77%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +R GDEWK+AFKT +GL+EWLVMPFG+SNAPSTFMRVM  + RP IG  +VVYFDDIL+Y
Sbjct: 728  IREGDEWKTAFKTPDGLYEWLVMPFGMSNAPSTFMRVMTHVFRPYIGKFLVVYFDDILIY 787

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S S +DHL HL+T+  +LR E++F    KC FL E++LFLG+ +SAA IS D  KV AI 
Sbjct: 788  SHSKEDHLQHLRTIFHMLRQEKLFVNLKKCSFLQEQVLFLGFIVSAASISADPDKVHAIV 847

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            +WP  ++LT  RSFHGLASFY+RF+  FS+IMAPITDCM    F+WT A   AF  +K K
Sbjct: 848  NWPLPSTLTETRSFHGLASFYRRFIPSFSTIMAPITDCMKQGEFRWTHATTRAFEALKQK 907

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            ++EAPVL  P+ ++ FE++CDAS VGIG VLSQ GH +AYFSEKLN  + +YSTYD EFY
Sbjct: 908  MTEAPVLCHPELTKVFEVACDASGVGIGGVLSQEGHHVAYFSEKLNEAKQKYSTYDKEFY 967

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            A+VRA+R++++YL   EF+LY++H+AL++L +Q ++S+RH  W+ YLQ FTFVI+H+ G 
Sbjct: 968  AIVRALRYWQYYLLPNEFVLYSDHQALRYLHSQRNVSSRHIKWTEYLQIFTFVIRHRPGV 1027

Query: 903  INRVVDALSR 932
             N+V DALSR
Sbjct: 1028 DNKVADALSR 1037


>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/354 (53%), Positives = 253/354 (71%), Gaps = 1/354 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            +RPGDEWK+AFK+++GLFEWLVMPFGLSNAPSTFMR+MNQ+LRP IG+ VVVYFDDIL+Y
Sbjct: 716  IRPGDEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIY 775

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S + ++HL HL+ VL +LR  +++    KC F + ++LFLG+ +   GI VD  K+ AI 
Sbjct: 776  STTKEEHLVHLRQVLDVLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAIL 835

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
            DWPT   ++ VRSFHGLA+FY+RFVRHFSSI APIT+C+    F W    + +F +IK K
Sbjct: 836  DWPTPKIVSEVRSFHGLATFYRRFVRHFSSITAPITECLKKGRFSWGDEQERSFADIKEK 895

Query: 543  LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
            L  APVL LP+F + FE+ CDAS VG+GAVLSQ   P+A+FSEKL+    ++STYD EFY
Sbjct: 896  LCTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDACQKWSTYDQEFY 955

Query: 723  AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
            AVVRA++ + HYL  +EF+L+T+H+AL+              W  +LQ+F+FVI+H +G 
Sbjct: 956  AVVRALKQWEHYLIQKEFVLFTDHQALR--------------WVTFLQKFSFVIRHTSGK 1001

Query: 903  INRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDI-LSCLHEGEQMDF 1061
             NRVVDALSRR+ LL      +VGF+  K+LY  D  F++I   C ++    D+
Sbjct: 1002 TNRVVDALSRRASLLVTQTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADY 1055


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  392 bits (1006), Expect = e-106
 Identities = 179/341 (52%), Positives = 257/341 (75%), Gaps = 1/341 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN +LR  IG  VVVYFDDIL+Y
Sbjct: 821  MKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIY 880

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SK++++H+ H+Q VL +LR EQ++A   KC F +++++FLG+ +S  GI VD++KV AIK
Sbjct: 881  SKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIK 940

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
            DWPT  +++ V+SF GLA FY+RFVR FS+I AP+ +    G +FQW    + AF E+K 
Sbjct: 941  DWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKK 1000

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            +LSE P+L+LPDF++ FE+ CDAS +GIG VL Q G P+AYFSEKL G ++ YS YD E 
Sbjct: 1001 RLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKEL 1060

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VRA+  ++HYL+ +EF+++++HEALK+L  Q  L+ RHA W  +++ F +V+K++ G
Sbjct: 1061 YALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKG 1120

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKD 1022
              N V DALSR+++LL  + V + G ++ K+LY+ D  F +
Sbjct: 1121 KENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSE 1161


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score =  388 bits (997), Expect = e-105
 Identities = 178/308 (57%), Positives = 242/308 (78%)
 Frame = +3

Query: 3   LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
           +RP DEWK++FKT++ L+EWLVMPFGL+NAPSTFMR+M Q+L+P IG  VVVYFDDIL Y
Sbjct: 49  IRPRDEWKTSFKTKDELYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILTY 108

Query: 183 SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
           S+S +DH  HL+ V++ LR+E+ +    KC F+S  ++FLG+ +S+ G+  D  K+ AI 
Sbjct: 109 SRSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPKKIKAIV 168

Query: 363 DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCMHGTSFQWTPAADAAFNEIKIK 542
           DWP  T++  VRSFHG+ +FY+RF+++F+SIMAPIT CM    F WT AA+ AF EIK K
Sbjct: 169 DWPVPTNIHEVRSFHGITTFYRRFIQNFNSIMAPITKCMKPGLFIWTKAANKAFEEIKSK 228

Query: 543 LSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFY 722
           +   P+L LPDF + FE++CDAS VGIGAVLSQ GH +A+FSEKLNG + +YSTYD+EFY
Sbjct: 229 MVNPPILHLPDFEKVFEVACDASHVGIGAVLSQEGHLVAFFSEKLNGAKKKYSTYDLEFY 288

Query: 723 AVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGN 902
           A+V+A+RH++HYL ++EF LY++HEAL++L++Q  L++RHA WS +LQ FTF +KH AG 
Sbjct: 289 AMVQAIRHWQHYLSYKEFFLYSDHEALQYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGI 348

Query: 903 INRVVDAL 926
            N+V DAL
Sbjct: 349 ENKVADAL 356


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
            Group]
          Length = 848

 Score =  386 bits (992), Expect = e-105
 Identities = 184/349 (52%), Positives = 251/349 (71%), Gaps = 1/349 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN++LRP IG  VVVYFDDIL+Y
Sbjct: 182  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIY 241

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SKS+ +H +HL+ V   LR  ++F    KC F ++R+ FLGY ++  GI VDQ KV AI+
Sbjct: 242  SKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQ 301

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WPT  +++ VRSF GLA FY+RFV+ FS+I AP+      G  F W  + + AF+ +K 
Sbjct: 302  SWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKD 361

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G P+AYFSEKL+GP + YSTYD E 
Sbjct: 362  KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKEL 421

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 422  YALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKG 481

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEG 1046
              N + DALSRR  LLT +   I G +T KD YA D  F D+L    +G
Sbjct: 482  KENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDG 530


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  386 bits (991), Expect = e-105
 Identities = 184/349 (52%), Positives = 251/349 (71%), Gaps = 1/349 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN++LRP IG  VVVYFDDIL+Y
Sbjct: 818  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIY 877

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SKS+ +H +HL+ V   LR  ++F    KC F ++R+ FLGY ++  GI VDQ KV AI+
Sbjct: 878  SKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQ 937

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WPT  +++ VRSF GLA FY+RFV+ FS+I AP+      G  F W  + + AF+ +K 
Sbjct: 938  SWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKD 997

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G P+AYFSEKL+GP + YSTYD E 
Sbjct: 998  KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKEL 1057

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 1058 YALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKG 1117

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEG 1046
              N + DALSRR  LLT +   I G +T KD YA D  F D+L    +G
Sbjct: 1118 KENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDG 1166



 Score =  255 bits (652), Expect = 2e-65
 Identities = 131/298 (43%), Positives = 186/298 (62%), Gaps = 1/298 (0%)
 Frame = +3

Query: 48   GLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVYSKSVDDHLHHLQTVL 227
            GL+E+ VM FGL+NAP+ FM +MN++    +   VVV+ DDILVYS+S +DH HHL+ VL
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684

Query: 228  QILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIKDWPTTTSLTAVRSFH 407
              LR  Q++A  +KC F    + FLG+ ISA G++VD   V A+ DW    ++T +RSF 
Sbjct: 1685 GKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFL 1744

Query: 408  GLASFYQRFVRHFSSIMAPITDCM-HGTSFQWTPAADAAFNEIKIKLSEAPVLILPDFSR 584
            GLA +Y+RF+ +FS I  P+T  +     F W+P  + AF  +K KL  +PVLILPD  +
Sbjct: 1745 GLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRK 1804

Query: 585  PFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEFYAVVRAVRHFRHYLF 764
             F + CDAS  G+G VL Q GH +AY S +L      Y T+D+E  AVV A++ +RHYL 
Sbjct: 1805 DFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLI 1864

Query: 765  HQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAGNINRVVDALSRRS 938
                 +YT+H++LK++ TQ  L+ R   W   ++ +   I +  G  N V DALSR+S
Sbjct: 1865 GNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKS 1922


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  385 bits (990), Expect = e-104
 Identities = 183/344 (53%), Positives = 253/344 (73%), Gaps = 1/344 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT +GL+EWLVMPFGL+NAPSTFMR+MN +LR  IG  V+VYFDDILVY
Sbjct: 1010 MKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVY 1069

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SKS+++H+ HL+ VL++LR E+++A   KC F ++ ++FLG+ +S  G+ VD+ KV AI+
Sbjct: 1070 SKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIR 1129

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITDCM-HGTSFQWTPAADAAFNEIKI 539
            +WP+  S+  VRSFHGLA FY+RFV+ FS++ AP+T+ +     F+W  A + AF  +K 
Sbjct: 1130 EWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKE 1189

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ APVL LPDF + FE+ CDAS VGIG VL Q   PIAYFSEKL G  + Y TYD E 
Sbjct: 1190 KLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKEL 1249

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VRA++  +HYL+ +EF+++T+HE+LKHL  Q  L+ RHA W  +++ F +VIK++ G
Sbjct: 1250 YALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKG 1309

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILS 1031
              N V DALSRR +LL+ +   ++GF+  K LYA D  F+ I S
Sbjct: 1310 KDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYS 1353


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  385 bits (989), Expect = e-104
 Identities = 184/349 (52%), Positives = 249/349 (71%), Gaps = 1/349 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN++LRP IG  VVVYFDDIL+Y
Sbjct: 763  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIY 822

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SKS+ +H  HL+ V   LR  ++F    KC F ++R+ FLGY ++  GI VDQ KV AI+
Sbjct: 823  SKSMGEHFKHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQ 882

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WPT  +++ VRSF GLA FY+RFV+ FS+I AP+      G  F W  + + AF+ +K 
Sbjct: 883  SWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKD 942

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G P+AYFSEKL GP + YSTYD E 
Sbjct: 943  KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLTGPVLNYSTYDKEL 1002

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 1003 YALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKG 1062

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEG 1046
              N + DALSRR  LLT +   I G +T KD YA D  F D+L    +G
Sbjct: 1063 KENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDG 1111


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  383 bits (983), Expect = e-104
 Identities = 182/350 (52%), Positives = 248/350 (70%), Gaps = 1/350 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN++LR  IG  VVVYFDDIL+Y
Sbjct: 821  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIY 880

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            SKS+D+H+ H++ V   LR  ++F    KC F ++R+ FLGY ++  GI VDQ KV AI 
Sbjct: 881  SKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIH 940

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WP   ++T VRSF GLA FY+RFV+ FS+I AP+ +    G  F W    + AFN +K 
Sbjct: 941  GWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKD 1000

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G P+AYFSEKL+G  + YSTYD E 
Sbjct: 1001 KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKEL 1060

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 1061 YALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKG 1120

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEGE 1049
              N + DALSRR  LL  +   I G +T KD Y  D  FKD+L    +G+
Sbjct: 1121 KENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDGK 1170


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  383 bits (983), Expect = e-104
 Identities = 182/349 (52%), Positives = 250/349 (71%), Gaps = 1/349 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTF+R+MN++LR  IG  VVVYFDDIL+Y
Sbjct: 846  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIY 905

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S+S++DH  HL+ V   LR E++F    KC F ++R+ FLGY ++  GI VDQ KV AI 
Sbjct: 906  SRSIEDHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIH 965

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WP  T++T VRSF GLA FY+RFV+ FS+I AP+ +      +F W  A   AF+ +K 
Sbjct: 966  SWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKD 1025

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G PI YFSEKL+GP + YSTYD E 
Sbjct: 1026 KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSGPSLNYSTYDKEL 1085

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            +A+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 1086 FALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKKG 1145

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEG 1046
              N + DALSRR  +L+ +   I G +T K+ YA D  FKD+L    EG
Sbjct: 1146 KENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEG 1194


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  382 bits (982), Expect = e-103
 Identities = 180/349 (51%), Positives = 248/349 (71%), Gaps = 1/349 (0%)
 Frame = +3

Query: 3    LRPGDEWKSAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQILRPLIGTCVVVYFDDILVY 182
            ++ GDEWK+AFKT+ GL+EWLVMPFGL+NAPSTFMR+MN++LR  IG  VVVYFDDIL+Y
Sbjct: 877  MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIY 936

Query: 183  SKSVDDHLHHLQTVLQILRSEQVFAAPNKCIFLSERILFLGYCISAAGISVDQTKVAAIK 362
            S+S++DHL HL+ V   LR  ++F    KC F ++R+ FLGY ++  GI VD+ K+ AI+
Sbjct: 937  SRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIE 996

Query: 363  DWPTTTSLTAVRSFHGLASFYQRFVRHFSSIMAPITD-CMHGTSFQWTPAADAAFNEIKI 539
             WP   ++T VRSF G A FY+RFVR FS+I AP+ +       + W  A + AF  +K 
Sbjct: 997  SWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKD 1056

Query: 540  KLSEAPVLILPDFSRPFELSCDASKVGIGAVLSQCGHPIAYFSEKLNGPRMRYSTYDMEF 719
            KL+ AP+L LPDF++ FEL CDAS +G+G VL Q G P+AYFSEKL+GP + YSTYD E 
Sbjct: 1057 KLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKEL 1116

Query: 720  YAVVRAVRHFRHYLFHQEFILYTNHEALKHLSTQDSLSARHANWSVYLQQFTFVIKHQAG 899
            YA+VR +  ++HYL+ +EF+++++HE+LKH+ +Q  L+ RHA W  +++ F +VIKH+ G
Sbjct: 1117 YALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKG 1176

Query: 900  NINRVVDALSRRSLLLTDMRVSIVGFDTFKDLYATDPFFKDILSCLHEG 1046
              N + DALSRR  +L+ +   I G +T KD Y  D  FKD+L    EG
Sbjct: 1177 KDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCREG 1225