BLASTX nr result
ID: Rehmannia23_contig00009634
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00009634 (464 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXB28928.1| hypothetical protein L484_012687 [Morus notabilis] 67 2e-09 ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ... 59 7e-07 gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 59 9e-07 gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK... 58 1e-06 >gb|EXB28928.1| hypothetical protein L484_012687 [Morus notabilis] Length = 343 Score = 67.4 bits (163), Expect = 2e-09 Identities = 24/54 (44%), Positives = 41/54 (75%) Frame = -1 Query: 164 SHADYLDLKAKGLCFKCREPYHPLHNCPAKSLRVMIAAEGEDVDDPGQSELVDS 3 SH ++L+++ GLCFKCR P+HPLH CP KS+R +IA E +++++ G + +++ Sbjct: 215 SHQEFLEMREMGLCFKCRHPFHPLHQCPNKSMRAIIAGEEDELEEEGDLDRLEA 268 >ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 1280 Score = 58.9 bits (141), Expect = 7e-07 Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 167 LSHADYLDLKAKGLCFKCREPYHP-LHNCPAKSLRVMIAAEGEDVDDPGQ 21 + + + + +AKGLCFKC YHP LH CP KSLRV+I EGE V++ G+ Sbjct: 927 IQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGE 976 >gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 1297 Score = 58.5 bits (140), Expect = 9e-07 Identities = 23/49 (46%), Positives = 34/49 (69%) Frame = -1 Query: 167 LSHADYLDLKAKGLCFKCREPYHPLHNCPAKSLRVMIAAEGEDVDDPGQ 21 LS+ + ++ K KGLCFKC P+HP+H CP K LRV++ E E+ + G+ Sbjct: 99 LSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGK 147 >gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown [Medicago truncatula] Length = 185 Score = 57.8 bits (138), Expect = 1e-06 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 140 KAKGLCFKCREPYHP-LHNCPAKSLRVMIAAEGEDVDDPGQ 21 +AKGLCFKC YHP LH CP KSLRV+I EGE V++ G+ Sbjct: 5 RAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGE 45