BLASTX nr result

ID: Rehmannia23_contig00009634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00009634
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB28928.1| hypothetical protein L484_012687 [Morus notabilis]      67   2e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    59   7e-07
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    59   9e-07
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    58   1e-06

>gb|EXB28928.1| hypothetical protein L484_012687 [Morus notabilis]
          Length = 343

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 24/54 (44%), Positives = 41/54 (75%)
 Frame = -1

Query: 164 SHADYLDLKAKGLCFKCREPYHPLHNCPAKSLRVMIAAEGEDVDDPGQSELVDS 3
           SH ++L+++  GLCFKCR P+HPLH CP KS+R +IA E +++++ G  + +++
Sbjct: 215 SHQEFLEMREMGLCFKCRHPFHPLHQCPNKSMRAIIAGEEDELEEEGDLDRLEA 268


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 167  LSHADYLDLKAKGLCFKCREPYHP-LHNCPAKSLRVMIAAEGEDVDDPGQ 21
            + + +  + +AKGLCFKC   YHP LH CP KSLRV+I  EGE V++ G+
Sbjct: 927  IQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGE 976


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = -1

Query: 167 LSHADYLDLKAKGLCFKCREPYHPLHNCPAKSLRVMIAAEGEDVDDPGQ 21
           LS+ + ++ K KGLCFKC  P+HP+H CP K LRV++  E E+ +  G+
Sbjct: 99  LSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGK 147


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -1

Query: 140 KAKGLCFKCREPYHP-LHNCPAKSLRVMIAAEGEDVDDPGQ 21
           +AKGLCFKC   YHP LH CP KSLRV+I  EGE V++ G+
Sbjct: 5   RAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGE 45


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