BLASTX nr result

ID: Rehmannia23_contig00009246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00009246
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    58   1e-06
ref|XP_002311458.2| zinc finger family protein [Populus trichoca...    56   4e-06

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 20/120 (16%)
 Frame = -1

Query: 315 DFELDLDSLLGKGLEDEAFDIEKLGFLDCNKNGETSNHCFLPSESVKFEDKE-------- 160
           +F  D++SLLGKGL++E+F +E LG +DC +  + S    L S  VK E++E        
Sbjct: 200 EFAADVESLLGKGLDNESFGMEGLGLIDCKE--KESVEYSLHSGRVKLEEEEDIGGVMAC 257

Query: 159 ---VGIDVGGEIFEMNFEYGYSPIITCELGED---------DNKARNEKNNLEEYWKVDY 16
                ID+  E FE+NF+YG SP  TCE  E+         +NK  + K   +   ++DY
Sbjct: 258 QADAEIDMTREPFELNFDYG-SP-ATCEEEEEKVAVGAMDMNNKVDDPKKKNKILLRLDY 315


>ref|XP_002311458.2| zinc finger family protein [Populus trichocarpa]
           gi|118486554|gb|ABK95116.1| unknown [Populus
           trichocarpa] gi|550332886|gb|EEE88825.2| zinc finger
           family protein [Populus trichocarpa]
          Length = 444

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 17/110 (15%)
 Frame = -1

Query: 315 DFELDLDSLLGKGLEDEAFDIEKLGFLDCNKNGETSNHCF-LPSESVKFEDKE------- 160
           +F  D++SLLG+GLE+E+F +E+LG +DC +  E     F L +  VK ED+E       
Sbjct: 208 EFAADMESLLGRGLENESFGMEELGLMDCKEEKEFEVKGFPLWNGKVKVEDEENASVERK 267

Query: 159 ------VGIDVG---GEIFEMNFEYGYSPIITCELGEDDNKARNEKNNLE 37
                  GI+       IFE++F+Y  S   TC  GE+D K   E+ +L+
Sbjct: 268 AVRKCYAGIETDMAKDPIFELSFDYNSS--ATC--GEEDEKVGIEEGDLK 313


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