BLASTX nr result

ID: Rehmannia23_contig00009043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00009043
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300118.1| hypothetical protein POPTR_0001s33590g [Popu...    57   5e-06

>ref|XP_002300118.1| hypothetical protein POPTR_0001s33590g [Populus trichocarpa]
           gi|118485877|gb|ABK94785.1| unknown [Populus
           trichocarpa] gi|222847376|gb|EEE84923.1| hypothetical
           protein POPTR_0001s33590g [Populus trichocarpa]
          Length = 123

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +2

Query: 173 SNSAPTNSVDFVGNYQPSKPKAPPNSATAGSALGFLIVNQDQVFPQQAPKVAFVV--TDR 346
           S+  P+++V +    +PS+    P +A+ G       VN D +   Q  KV+F+V   D 
Sbjct: 21  SSPKPSSNVQYSSKVKPSQTS--PTTASVG------YVNHDYMIAPQKQKVSFIVPAADN 72

Query: 347 NPDSYGKLESIVYGGXXXXXXXXXXXXXYISSVQERFRLERVNSERKNFED 499
           + D   + +   + G             YISSVQERF+LER+NSERK  ED
Sbjct: 73  HRDKLSQFDK--FFGVVGDVSVDTKATSYISSVQERFKLERINSERKQLED 121


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