BLASTX nr result
ID: Rehmannia23_contig00009006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00009006
(407 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 129 2e-44
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 129 1e-43
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 125 3e-43
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 121 3e-43
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera] 127 4e-42
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 129 5e-42
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-37
gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-37
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 105 2e-37
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group... 119 5e-37
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 117 9e-37
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ... 117 9e-37
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-... 117 9e-37
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group... 117 9e-37
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni... 117 9e-37
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 117 9e-37
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group... 117 9e-37
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc... 118 9e-37
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group] 118 1e-36
gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-... 115 1e-36
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 129 bits (324), Expect(2) = 2e-44
Identities = 57/81 (70%), Positives = 69/81 (85%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L CTRPDIAY+VSKLSR+TSNP HW+ + RVL+YL++T +YG+ YTRYPAVLEGY D
Sbjct: 1065 LMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSD 1124
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
ANWIS+ KDSKS SG+VFT+G
Sbjct: 1125 ANWISNVKDSKSHSGYVFTLG 1145
Score = 75.9 bits (185), Expect(2) = 2e-44
Identities = 35/55 (63%), Positives = 48/55 (87%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYL 241
LSQSHYV+ IL +F+ ++ A+TPVD++LHL+KN+GE VSQ+EY+R+IGSLMYL
Sbjct: 1011 LSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYL 1065
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 129 bits (324), Expect(2) = 1e-43
Identities = 57/81 (70%), Positives = 69/81 (85%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L CTRPDIAY+VSKLSR+TSNP HW+ + RVL+YL++T +YG+ YTRYPAVLEGY D
Sbjct: 858 LMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSD 917
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
ANWIS+ KDSKS SG+VFT+G
Sbjct: 918 ANWISNVKDSKSHSGYVFTLG 938
Score = 73.2 bits (178), Expect(2) = 1e-43
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYL 241
LSQSHYV+ IL +F+ ++ A+TP+D++LHL+ N+GE VSQ+EY+RVIGSLMYL
Sbjct: 804 LSQSHYVDKILGKFDKDNSGVARTPMDVTLHLSNNKGESVSQVEYSRVIGSLMYL 858
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 125 bits (313), Expect(2) = 3e-43
Identities = 55/81 (67%), Positives = 67/81 (82%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L CTRPDIAY+V KLSR+TSNP HW+ + RVL+YL++T +Y + YTRYPAVLEGY D
Sbjct: 1104 LMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSD 1163
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
ANWIS+ KDSKS SG+VFT+G
Sbjct: 1164 ANWISNVKDSKSHSGYVFTLG 1184
Score = 75.9 bits (185), Expect(2) = 3e-43
Identities = 35/55 (63%), Positives = 48/55 (87%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYL 241
LSQSHYV+ IL +F+ ++ A+TPVD++LHL+KN+GE VSQ+EY+R+IGSLMYL
Sbjct: 1050 LSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYL 1104
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 121 bits (303), Expect(2) = 3e-43
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = -2
Query: 235 CTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANW 56
C DIAY+V+KLSRFT+N DHWK + RVLRYL+YT+NYG+ Y RYP +LEGY DANW
Sbjct: 731 CMCLDIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTLLEGYSDANW 790
Query: 55 ISDTKDSKSTSGFVFTIG 2
I D KDSKSTSG++FTIG
Sbjct: 791 IFDMKDSKSTSGYIFTIG 808
Score = 79.7 bits (195), Expect(2) = 3e-43
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
LSQ HY+E IL+RFN + + P KTPVDL+LH KN G + QLEY+R+IGSLMY+ N
Sbjct: 674 LSQCHYIEKILKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLMYVMN 730
>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 127 bits (319), Expect(2) = 4e-42
Identities = 56/81 (69%), Positives = 68/81 (83%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L CTRPDIAY+ SKLSR+TSNP HW+ + RVL+YL++T +YG+ YTRYPAVLEGY D
Sbjct: 101 LMSCTRPDIAYAXSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSD 160
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
ANWIS+ KDSKS SG+VFT+G
Sbjct: 161 ANWISNVKDSKSHSGYVFTLG 181
Score = 70.1 bits (170), Expect(2) = 4e-42
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYL 241
LSQSHYV+ IL +F+ ++ A+TPVD++L L+KN+ E VSQ+EY+RVIGSLMYL
Sbjct: 47 LSQSHYVDKILGKFDKDNSGVARTPVDVTLXLSKNKXESVSQVEYSRVIGSLMYL 101
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 129 bits (323), Expect(2) = 5e-42
Identities = 59/74 (79%), Positives = 66/74 (89%)
Frame = -2
Query: 235 CTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANW 56
CTR DIAYSVSKLSRFTSNP +HWK++ RVL YLKYT NYG+ +TRYPAVLEGY DANW
Sbjct: 1106 CTRLDIAYSVSKLSRFTSNPGENHWKSIIRVLGYLKYTQNYGLHFTRYPAVLEGYSDANW 1165
Query: 55 ISDTKDSKSTSGFV 14
ISD+KDSKSTSG+V
Sbjct: 1166 ISDSKDSKSTSGYV 1179
Score = 68.2 bits (165), Expect(2) = 5e-42
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
LSQ HY+E IL +F + P KTP+D++LHL KN G SQLEY+ +IGSLMY+ N
Sbjct: 1049 LSQPHYIEKILEKFKKYDIRPKKTPMDVNLHLFKNTGIGKSQLEYSHIIGSLMYVMN 1105
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 120 bits (301), Expect(2) = 2e-37
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YTRYPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 60.8 bits (146), Expect(2) = 2e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1109
Score = 120 bits (301), Expect(2) = 2e-37
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK TM G+ Y+RYPAVLEGY D
Sbjct: 898 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYSRYPAVLEGYSD 957
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 958 SNWISDVDEIKATSGYVFTLG 978
Score = 60.8 bits (146), Expect(2) = 2e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 844 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 900
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 105 bits (262), Expect(2) = 2e-37
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L CTRPDIAY+V KLSR+TSNP HW+ + RVL+YL++T +YG+ YTRYPAVLEGY D
Sbjct: 898 LMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSD 957
Query: 64 ANWISD 47
ANWIS+
Sbjct: 958 ANWISN 963
Score = 75.9 bits (185), Expect(2) = 2e-37
Identities = 35/55 (63%), Positives = 48/55 (87%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYL 241
LSQSHYV+ IL +F+ ++ A+TPVD++LHL+KN+GE VSQ+EY+R+IGSLMYL
Sbjct: 844 LSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYL 898
>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1320
Score = 119 bits (298), Expect(2) = 5e-37
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK TM G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 60.8 bits (146), Expect(2) = 5e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1320
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1320
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093
>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1297
Score = 117 bits (294), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1091 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 1150
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1151 SNWISDVDEIKATSGYVFTLG 1171
Score = 61.6 bits (148), Expect(2) = 9e-37
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ SQLEY+++IGSLMYL +
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARSQLEYSQIIGSLMYLAS 1093
>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 118 bits (296), Expect(2) = 9e-37
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 922 LTSATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSD 981
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 982 SNWISDVDEIKATSGYVFTLG 1002
Score = 60.8 bits (146), Expect(2) = 9e-37
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -3
Query: 399 QSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
+SHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYLT+
Sbjct: 870 ESHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLTS 924
>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 118 bits (295), Expect(2) = 1e-36
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK T+ G+ YT YPAVLEGY D
Sbjct: 1053 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVGLGVHYTGYPAVLEGYSD 1112
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1113 SNWISDVDEIKATSGYVFTLG 1133
Score = 60.8 bits (146), Expect(2) = 1e-36
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 999 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1055
>gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550001|gb|ABA92798.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1234
Score = 115 bits (289), Expect(2) = 1e-36
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = -2
Query: 244 LNECTRPDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCD 65
L TRPDI+++VSKLSRFTSNP DHW+A+ RV+RYLK TM G+ Y+ YP +LEGY D
Sbjct: 999 LASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYSGYPVILEGYSD 1058
Query: 64 ANWISDTKDSKSTSGFVFTIG 2
+NWISD + K+TSG+VFT+G
Sbjct: 1059 SNWISDVDEIKATSGYVFTLG 1079
Score = 63.2 bits (152), Expect(2) = 1e-36
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -3
Query: 405 LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTN 235
L QSHYVE IL RF F + P+ TP D SL L KN+ +QLEY+++IGSLMYL +
Sbjct: 945 LLQSHYVEKILNRFGYFDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1001