BLASTX nr result

ID: Rehmannia23_contig00008854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00008854
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao]       57   3e-06
ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik...    56   4e-06
ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citr...    56   4e-06
ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citr...    56   4e-06

>gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao]
          Length = 779

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = -2

Query: 196 DDPHNNSGYRANGYRAN-QMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDA 20
           D+   NSG  A G   +  ++   ESE L DGG+RI EFP  +KR V+RPH  V+ IV A
Sbjct: 49  DNHRENSGDDAGGAVTDPSLAGPSESEVLADGGVRISEFPAVVKRTVNRPHGSVMAIVAA 108

Query: 19  ERA 11
           ERA
Sbjct: 109 ERA 111


>ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Citrus sinensis]
          Length = 773

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = -2

Query: 205 ETDDDPHN-NSGYRANG----YRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSL 41
           ETD+  +N N+ +R NG    +         E+E L+DGG RICEFP A++RVV+RPH  
Sbjct: 45  ETDNHNNNSNADHRDNGDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVS 104

Query: 40  VLGIVDAERA 11
           V+ IV  E A
Sbjct: 105 VMDIVAIEAA 114


>ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
           gi|557536372|gb|ESR47490.1| hypothetical protein
           CICLE_v10000405mg [Citrus clementina]
          Length = 731

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = -2

Query: 205 ETDDDPHN-NSGYRANG----YRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSL 41
           ETD+  +N N+ +R NG    +         E+E L+DGG RICEFP A++RVV+RPH  
Sbjct: 45  ETDNHNNNSNADHRDNGDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVS 104

Query: 40  VLGIVDAERA 11
           V+ IV  E A
Sbjct: 105 VMDIVAIEAA 114


>ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
           gi|557536371|gb|ESR47489.1| hypothetical protein
           CICLE_v10000405mg [Citrus clementina]
          Length = 576

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = -2

Query: 205 ETDDDPHN-NSGYRANG----YRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSL 41
           ETD+  +N N+ +R NG    +         E+E L+DGG RICEFP A++RVV+RPH  
Sbjct: 45  ETDNHNNNSNADHRDNGDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVS 104

Query: 40  VLGIVDAERA 11
           V+ IV  E A
Sbjct: 105 VMDIVAIEAA 114


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