BLASTX nr result
ID: Rehmannia23_contig00008819
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00008819 (333 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307... 52 4e-08 ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295... 49 6e-08 gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 46 3e-06 >ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307720 [Fragaria vesca subsp. vesca] Length = 326 Score = 51.6 bits (122), Expect(2) = 4e-08 Identities = 29/85 (34%), Positives = 43/85 (50%) Frame = -1 Query: 255 FHRRCQIRNGRSRIQGLMVDGSYTEDPVALGNHIISFYTDLFADTGQTTSDYTLVDHLIS 76 FH +IR RS I L + +D L +H++ +T F D G + LV+++I Sbjct: 94 FHTLAKIRRARSFITSLCIGNDLVDDVNILRSHVVEHFTTAFMDDG-NIRETGLVENVIP 152 Query: 75 PIVSMVDNALLTAIPSESEVKEAAF 1 +VS +N L AIP+ EVK F Sbjct: 153 SVVSYSENDSLLAIPTADEVKNVVF 177 Score = 31.2 bits (69), Expect(2) = 4e-08 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 332 LLMQSEFLQQKSRSDWLKDGDRNTSF 255 L +Q F K R W+K+GDRNTS+ Sbjct: 68 LSIQENFWADKVRVRWVKEGDRNTSY 93 >ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295596 [Fragaria vesca subsp. vesca] Length = 370 Score = 49.3 bits (116), Expect(2) = 6e-08 Identities = 26/76 (34%), Positives = 42/76 (55%) Frame = -1 Query: 255 FHRRCQIRNGRSRIQGLMVDGSYTEDPVALGNHIISFYTDLFADTGQTTSDYTLVDHLIS 76 FH + R RS I L +DP+ + NHI+++YTDLFA+ D L+ +I Sbjct: 295 FHAMFRARRARSSITLLRDGNQVYQDPLTIQNHIVAYYTDLFANHAD-YCDTGLISRVIP 353 Query: 75 PIVSMVDNALLTAIPS 28 +++ +N LT++PS Sbjct: 354 SLITDDENMSLTSVPS 369 Score = 33.1 bits (74), Expect(2) = 6e-08 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -2 Query: 332 LLMQSEFLQQKSRSDWLKDGDRNTSF 255 L +Q FL++KSR W+ +GD NT+F Sbjct: 269 LRLQELFLKEKSRLSWISEGDLNTTF 294 >gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1229 Score = 46.2 bits (108), Expect(2) = 3e-06 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = -1 Query: 255 FHRRCQIRNGRSRIQGLM-VDGSYTEDPVALGNHIISFYTDLFADTGQTTSDYTLVDHLI 79 FH + R ++R+ + ++G + + I ++ +F T ++ D+++VD I Sbjct: 250 FHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIF--TSESDGDFSVVDEAI 307 Query: 78 SPIVSMVDNALLTAIPSESEVKEAAF 1 P+VS DN LT IP++ EVK+A F Sbjct: 308 EPMVSQGDNDFLTRIPNDEEVKDAVF 333 Score = 30.0 bits (66), Expect(2) = 3e-06 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 326 MQSEFLQQKSRSDWLKDGDRNTSF 255 ++ +F +Q+SR WL GDRNT + Sbjct: 226 LEEQFWKQRSRVLWLHSGDRNTGY 249