BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00008815
         (1122 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                50   2e-20
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub...    40   4e-07
ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    37   7e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 49.7 bits (117), Expect(4) = 2e-20
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = -1

Query: 678 ILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGK 499
           I +  +G  ++ +I K   E++  +L  G +Y+IR+FLV +    YKTS  K+ + F+ K
Sbjct: 45  IFHDKEGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYK 104

Query: 498 THMFEMFDKTYPRFMYVFKDFKELYDFEKID 406
           T + E+ D  +P  M+  +   +L   +KID
Sbjct: 105 TVVRELKDIVFPSHMFRLQPLSQLK--QKID 133



 Score = 39.7 bits (91), Expect(4) = 2e-20
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -3

Query: 892 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKPAFNDNTEINSLECIFHDSE 743
           M P++   + ++   T+ AIKVRL+  Y+ P       I   ECIFHD E
Sbjct: 1   MAPLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHDKE 50



 Score = 38.9 bits (89), Expect(4) = 2e-20
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = -2

Query: 107 RITCTLWEEYIDILLPYLEEHNRGPIIIILQMCR 6
           +I CT+W++++  L P+ +   + P+II+LQ CR
Sbjct: 176 QIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCR 209



 Score = 38.1 bits (87), Expect(4) = 2e-20
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -3

Query: 289 LTDIIGRVVSMQSTQSTKVAGKITRFLDIILEDLE 185
           L D+IG VV + + Q   +AGK TR +D +LED E
Sbjct: 139 LIDLIGMVVEINTPQDKVIAGKATRLIDFLLEDTE 173


>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|358347930|ref|XP_003638003.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355503881|gb|AES85084.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355503938|gb|AES85141.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 566

 Score = 39.7 bits (91), Expect(3) = 4e-07
 Identities = 27/117 (23%), Positives = 52/117 (44%)
 Frame = -1

Query: 747 LRFVNIFYYVNFTNSIS*LMSNFILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDF 568
           +R V+++    F N       + +L   +  +I  S +K    + +  + EG  Y I + 
Sbjct: 22  VRVVHVWTVSEFNNPNEDNSIHMLLLDDKLGKIQASAKKHLVPRIRSNVEEGSTYDIENV 81

Query: 567 LVTNQSDKYKTSDTKFKIIFHGKTHMFEMFDKTYPRFMYVFKDFKELYDFEKIDDTI 397
           LVT    KY+ +  +FK+     T  F++   T P   + F  F E+ + E+ +  +
Sbjct: 82  LVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFDFMPFNEILEAEREEKVV 138



 Score = 33.5 bits (75), Expect(3) = 4e-07
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 107 RITCTLWEEYIDILLPYLEEHN-RGPIIIILQMCR 6
           R+ CTLW  Y + +  +L  H+   P+I+++Q C+
Sbjct: 174 RVHCTLWANYAERMNSFLAAHDPSSPVIVLIQQCK 208



 Score = 27.7 bits (60), Expect(3) = 4e-07
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 289 LTDIIGRVVSMQSTQSTKVAGKITRFLDIILEDLE 185
           + D+IG+VV     +   V G+ ++ +D+ L+D E
Sbjct: 137 VVDVIGQVVERDELKERDVNGRRSKIMDLTLQDSE 171


>ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355522143|gb|AET02597.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 637

 Score = 37.4 bits (85), Expect(3) = 7e-06
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
 Frame = -1

Query: 747 LRFVNIFYYVNFTNSIS*LMSNFILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDF 568
           +R V+++    F N       + +L      +I  S +K    + +  + EG  Y   + 
Sbjct: 22  VRVVHVWTVFEFNNPNEDNSIHMLLLDDNLGKIQASTKKHWVPRIRSNVEEGSTYDNENV 81

Query: 567 LVTNQSDKYKTSDTKFKIIFHGKTHMFEMFDKTYPRFMYVFKDFKELYDF---EKIDDTI 397
           LVT    KY+ +   FK+    KT  F+    T P   + F  F E+ +    EK+ D I
Sbjct: 82  LVTKNDPKYQVTQHSFKLNLIDKTKFFKFDATTIPLNHFDFMPFNEILEAKREEKVVDVI 141



 Score = 32.3 bits (72), Expect(3) = 7e-06
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 107 RITCTLWEEYIDILLPYLEEHN-RGPIIIILQMCR 6
           R+ CTLW  Y + +  +L  H+   P+++++Q C+
Sbjct: 174 RVRCTLWANYAERMNSFLVAHDPSSPVVVLIQHCK 208



 Score = 26.9 bits (58), Expect(3) = 7e-06
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 289 LTDIIGRVVSMQSTQSTKVAGKITRFLDIILEDLE 185
           + D+IG+ V     +   V G+ ++ +D+ L+D E
Sbjct: 137 VVDVIGQAVERDELKEKDVNGRRSKIMDLTLQDFE 171