BLASTX nr result
ID: Rehmannia23_contig00008691
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00008691
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 195 1e-47
ref|XP_002307225.1| predicted protein [Populus trichocarpa] 166 5e-39
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 139 7e-31
ref|XP_002312500.1| predicted protein [Populus trichocarpa] 131 1e-28
ref|XP_002332290.1| predicted protein [Populus trichocarpa] 117 2e-24
ref|XP_002331376.1| predicted protein [Populus trichocarpa] 115 8e-24
ref|XP_002332556.1| predicted protein [Populus trichocarpa] 112 9e-23
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 109 6e-22
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 102 7e-20
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 102 1e-19
ref|XP_002336894.1| predicted protein [Populus trichocarpa] 101 2e-19
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 100 5e-19
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao] 91 4e-16
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin... 91 4e-16
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [... 90 6e-16
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao] 89 8e-16
ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, part... 87 4e-15
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 87 4e-15
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 87 5e-15
gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposo... 85 2e-14
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 195 bits (495), Expect = 1e-47
Identities = 100/129 (77%), Positives = 105/129 (81%)
Frame = -1
Query: 387 QGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSCLSREQKYAFKNENSAYKLWKALEDKF 208
+GLDIAI INRLACGTIRSCLSREQKY KNE SA+KLWKALEDKF
Sbjct: 13 KGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYVVKNETSAHKLWKALEDKF 72
Query: 207 LKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSL 28
LKKSGQNKLLMKKRLFRF+Y+ GTTMN HIT FNQLVA LLNLDV F DEDLALML+SSL
Sbjct: 73 LKKSGQNKLLMKKRLFRFDYQQGTTMNAHITMFNQLVAYLLNLDVKFEDEDLALMLVSSL 132
Query: 27 PDEFEHLET 1
PDEFEHLET
Sbjct: 133 PDEFEHLET 141
>ref|XP_002307225.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 166 bits (420), Expect = 5e-39
Identities = 83/164 (50%), Positives = 112/164 (68%)
Frame = -1
Query: 492 PGRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINR 313
P + V + + VE FDG G+FGMW+ E +D L Q LD + + IN
Sbjct: 17 PQYIPVSSTKFEVEKFDGKGNFGMWKCEDMDMLVQINLDFTLEDKPEDLDDKSWER-INW 75
Query: 312 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTT 133
LAC +IR CL ++QKY F +NSA KLW+ALEDKF+KKS +N+L +KKR+FRF+++ GT+
Sbjct: 76 LACSSIRLCLVKDQKYTFSEQNSAKKLWQALEDKFMKKSIENRLYLKKRIFRFQHKKGTS 135
Query: 132 MNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
MN+H+ FN++ ADL NLDV DED AL+LL+SLPD +EHL T
Sbjct: 136 MNEHLNDFNKMTADLKNLDVEIDDEDKALLLLNSLPDIYEHLVT 179
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 139 bits (350), Expect = 7e-31
Identities = 81/141 (57%), Positives = 82/141 (58%)
Frame = -1
Query: 423 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSCLSREQKYAFKNENS 244
MWQGEVLD LFQQGLDIAI INRLACGTIRSCLSREQKYA KNE S
Sbjct: 1 MWQGEVLDSLFQQGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60
Query: 243 AYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFS 64
A+KLWKALEDKFLKKS DV F
Sbjct: 61 AHKLWKALEDKFLKKS---------------------------------------DVKFE 81
Query: 63 DEDLALMLLSSLPDEFEHLET 1
DEDLALMLLSSLPDEFEHLET
Sbjct: 82 DEDLALMLLSSLPDEFEHLET 102
>ref|XP_002312500.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 131 bits (330), Expect = 1e-28
Identities = 72/157 (45%), Positives = 96/157 (61%)
Frame = -1
Query: 492 PGRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINR 313
P + V + + VE FDG +FGMW+ EV+D L Q LD + + INR
Sbjct: 17 PQYIPVSSTKFEVEKFDGKCNFGMWKCEVMDMLVQMNLDFTLEDKPEDLDDKSWER-INR 75
Query: 312 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTT 133
LAC +IR CL ++QKYAF +NSA +LW+ALEDKF+KKS +N+L +KKR+F F+++
Sbjct: 76 LACSSIRLCLVKDQKYAFSEQNSAKELWQALEDKFMKKSIENRLYLKKRIFHFQHKK--- 132
Query: 132 MNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPD 22
ADL NLDV DED AL+LL+SLPD
Sbjct: 133 ------------ADLKNLDVEIDDEDKALLLLNSLPD 157
>ref|XP_002332290.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 117 bits (294), Expect = 2e-24
Identities = 53/99 (53%), Positives = 78/99 (78%)
Frame = -1
Query: 297 IRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHI 118
+ S + +K+ K +NSA +LW+ALEDKF+KKS +N+L +KKR+FRF+++ G++MN+H+
Sbjct: 22 VSSIKFKVEKFDGKEQNSAKELWQALEDKFMKKSIENRLYLKKRIFRFQHKKGSSMNEHL 81
Query: 117 TAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
FN+++ADL NLDV DED AL+LL+SLPD +EHL T
Sbjct: 82 NDFNKMIADLKNLDVEIDDEDKALLLLNSLPDTYEHLVT 120
>ref|XP_002331376.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 115 bits (289), Expect = 8e-24
Identities = 57/116 (49%), Positives = 78/116 (67%)
Frame = -1
Query: 492 PGRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINR 313
P + V N + VE FDG G+FGMW+ EV+D L Q LD + + INR
Sbjct: 17 PQYIPVSNTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTLEDKPEDLDDKSWER-INR 75
Query: 312 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYR 145
LAC +IR CL ++QKYAF +NSA +LW+ALEDKF+KKS +N+L +KKR+FRF+++
Sbjct: 76 LACSSIRLCLVKDQKYAFSEQNSAKELWQALEDKFIKKSIENRLYLKKRIFRFQHK 131
>ref|XP_002332556.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 112 bits (280), Expect = 9e-23
Identities = 50/91 (54%), Positives = 72/91 (79%)
Frame = -1
Query: 273 QKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVA 94
+K+ K +NSA +LW+ LEDKF+KKS +N+L +KKR+F F+++ GT+MN+H+ FN+++A
Sbjct: 30 EKFDRKEQNSAKELWQVLEDKFMKKSIENRLYLKKRIFHFQHKKGTSMNEHLNDFNKMIA 89
Query: 93 DLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
DL NLDV DED AL+LL+SL D +EHL T
Sbjct: 90 DLKNLDVEIDDEDKALLLLNSLSDTYEHLVT 120
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 109 bits (273), Expect = 6e-22
Identities = 56/161 (34%), Positives = 88/161 (54%)
Frame = -1
Query: 489 GRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL 310
G++ ++ + FDG G+FG+WQ V D L QQ + A+ + +
Sbjct: 81 GKLAPTCMKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQ 140
Query: 309 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTM 130
A TIR CLS + Y E S +W+ LE +F+ K+ NK +K++L+ + + G +
Sbjct: 141 AAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEGADL 200
Query: 129 NDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHL 7
H+ FNQLV DL+ +DV DED A++LL SLP+ +EH+
Sbjct: 201 TAHVNVFNQLVTDLVKMDVEVDDEDKAIVLLCSLPESYEHV 241
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 102 bits (255), Expect = 7e-20
Identities = 54/155 (34%), Positives = 83/155 (53%)
Frame = -1
Query: 465 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSC 286
+ V FDGTG+F +WQ + D L QQG+ A+ + + A TIR
Sbjct: 8 KFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLS 67
Query: 285 LSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFN 106
LS Y +E + ++W L ++ KS +KL +K++L+ + + + + H+ FN
Sbjct: 68 LSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFN 127
Query: 105 QLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
QLV DL LDV DED+A++LL SLP +EH+ T
Sbjct: 128 QLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVT 162
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 102 bits (253), Expect = 1e-19
Identities = 54/155 (34%), Positives = 83/155 (53%)
Frame = -1
Query: 465 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSC 286
+ V FDGTG+F +WQ + D L QQG+ A+ + + A TIR
Sbjct: 8 KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLS 67
Query: 285 LSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFN 106
LS Y +E ++ ++W L ++ KS +KL +K++L+ + + + + H+ FN
Sbjct: 68 LSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFN 127
Query: 105 QLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
QLV DL LDV DED A++LL SLP +EH+ T
Sbjct: 128 QLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVT 162
>ref|XP_002336894.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 101 bits (251), Expect = 2e-19
Identities = 50/109 (45%), Positives = 70/109 (64%)
Frame = -1
Query: 492 PGRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINR 313
P + + N + VE FDG G+FGMW+ EV+D L Q LD + + +NR
Sbjct: 17 PQYIPISNTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTLEDKPEDLDDKSWER-MNR 75
Query: 312 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKR 166
LAC +IR CL ++QKYAF +N A +LW+ALEDKF+KKS +N+L +KK+
Sbjct: 76 LACSSIRLCLVKDQKYAFSEQNFAKELWQALEDKFMKKSIENRLYLKKK 124
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 100 bits (248), Expect = 5e-19
Identities = 55/155 (35%), Positives = 80/155 (51%)
Frame = -1
Query: 465 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSC 286
+ V FDGTG+F +WQ + D L QQG+ A+ + A TIR
Sbjct: 8 KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRLS 67
Query: 285 LSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFN 106
LS Y +E S ++W L + KS +KL +K++L+ + + + + H+ FN
Sbjct: 68 LSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESDLRKHVDVFN 127
Query: 105 QLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
QLV DL LDV DED A++LL SLP +EH+ T
Sbjct: 128 QLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVT 162
>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
Length = 698
Score = 90.5 bits (223), Expect = 4e-16
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Frame = -1
Query: 483 MLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL-- 310
M+ + + +E F+G F +W ++ L QQGL A+ + N +
Sbjct: 1 MVTSSTKYEIEKFNGRNDFSLWCVKMCALLVQQGLLKALKEKEHLLSNLSNGEKDNLMEK 60
Query: 309 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTM 130
A I LS E +E SA +W L+ ++ KS N+L +K+RL+ + GT++
Sbjct: 61 AHSAILLALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSV 120
Query: 129 NDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEH 10
N HI FN+++ DL N+DV DEDLAL+LL SLP +E+
Sbjct: 121 NTHIDEFNRVILDLKNIDVKIEDEDLALILLCSLPPSYEN 160
>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
Length = 1011
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/101 (42%), Positives = 66/101 (65%)
Frame = -1
Query: 321 INRLACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRS 142
+NR CG IRSCL +E KY S K+W+ L +K+L KS +N+L + +RLFRF+
Sbjct: 836 MNRNTCGVIRSCLEQELKYDVIGVTSVMKMWEILNNKYLTKSVENRLHLLRRLFRFQMSR 895
Query: 141 GTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDE 19
GT++ ++ + +L+++L N+D SDE ++LL SLPDE
Sbjct: 896 GTSLAAYVNNYTKLLSNLANVDEKISDEYKTIILLGSLPDE 936
>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1029
Score = 89.7 bits (221), Expect = 6e-16
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = -1
Query: 483 MLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKT--INRL 310
M + + +E F+G F +W+ ++ L QQGL A+ + + +
Sbjct: 123 MATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKK 182
Query: 309 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTM 130
A I LS E +E SA +W LE ++ KS N+L MK+RL+ + GT++
Sbjct: 183 AHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSV 242
Query: 129 NDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEH 10
N HI FN+++ DL N+DV DEDLAL+LL LP +E+
Sbjct: 243 NTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYEN 282
>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 89.4 bits (220), Expect = 8e-16
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = -1
Query: 483 MLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL-- 310
M + + +E F+G F +W+ ++ L QQGL A+ + + +
Sbjct: 1 MATSSTKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEK 60
Query: 309 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTM 130
A I LS E +E SA +W LE ++ KS N+L MK+RL+ + GT++
Sbjct: 61 AHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSV 120
Query: 129 NDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEH 10
N HI FN+++ DL N+DV DEDLAL+LL LP +E+
Sbjct: 121 NTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYEN 160
>ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, partial [Eutrema
salsugineum] gi|557106278|gb|ESQ46603.1| hypothetical
protein EUTSA_v10000703mg, partial [Eutrema salsugineum]
Length = 162
Score = 87.0 bits (214), Expect = 4e-15
Identities = 50/157 (31%), Positives = 78/157 (49%)
Frame = -1
Query: 471 NIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIR 292
+++ + F+G G+FG+WQ V D L QQG+ A+ + A TIR
Sbjct: 6 SLKFDIPRFNGKGNFGLWQSRVKDLLTQQGMKKALLEKKPDKIKQDDWDDMQDQAVSTIR 65
Query: 291 SCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITA 112
CLS + + LE ++ KS +KL +K++LF + + HI
Sbjct: 66 FCLSDD-------------ITNQLEKMYMSKSLSSKLYLKQKLFGLKMVESGDLIAHINN 112
Query: 111 FNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
FNQ++ DL +D+ DED A++LL SLP ++E L T
Sbjct: 113 FNQIIGDLTRVDMKIEDEDKAMILLCSLPPQYETLVT 149
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 87.0 bits (214), Expect = 4e-15
Identities = 52/153 (33%), Positives = 76/153 (49%)
Frame = -1
Query: 468 IRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRS 289
+ + ++ F G F +WQ ++ L QQG A + A TI
Sbjct: 4 LNVKIDKFTGRNSFSLWQIKMRALLKQQGF-WAPLSKDKNAVVTPEMAILEEKAHSTIML 62
Query: 288 CLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAF 109
CL+ + +E +A LW LE ++ KS NKLL+K+RLF GT + +H+
Sbjct: 63 CLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQL 122
Query: 108 NQLVADLLNLDVTFSDEDLALMLLSSLPDEFEH 10
N L+ +L N+DV DED AL+LL SLP FE+
Sbjct: 123 NTLLLELRNIDVKIEDEDAALILLVSLPMSFEN 155
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 86.7 bits (213), Expect = 5e-15
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Frame = -1
Query: 468 IRISVETFDGTGHFGMWQGEVLDCLFQQGLD--IAIXXXXXXXXXXXXXKTINRLACGTI 295
++ V F+G F WQ + D L QQGL + + ++ A I
Sbjct: 4 VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAI 63
Query: 294 RSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHIT 115
R LS + +E++A +W LE ++ K+ NKL +KK+L+ GT H+
Sbjct: 64 RLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLN 123
Query: 114 AFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
FN L+ L NL V +ED A++LL+SLP +++L T
Sbjct: 124 VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLAT 161
>gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Triticum urartu]
Length = 528
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/103 (39%), Positives = 64/103 (62%)
Frame = -1
Query: 309 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTM 130
A TIR LS + Y +ENS K+W+ LE +F+ K+ K+ +K++L + G+ +
Sbjct: 371 AARTIRLFLSDQVIYHVMDENSPKKIWEKLESQFMSKTAMTKVYLKQKLHGMRIQEGSDL 430
Query: 129 NDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLET 1
+++ AFNQ+V DL L T DED+A++LL SLP ++HL T
Sbjct: 431 VEYMNAFNQVVTDLARLGATVDDEDMAILLLCSLPSSYDHLIT 473