BLASTX nr result
ID: Rehmannia23_contig00008277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00008277
(2285 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 59 7e-13
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub... 38 1e-08
ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 36 1e-07
ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511... 41 7e-07
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 36 5e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 58.5 bits (140), Expect(2) = 7e-13
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = -3
Query: 2175 QGERIHATIRKMHMEQYKKMLNEGRIYAIRDFLVTNQMDKYKTCVTKYKIMFHGKTHMFE 1996
+G +H I K +E+Y ML G++Y+IR+FLV + YKT KY + F+ KT + E
Sbjct: 50 EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRE 109
Query: 1995 LFDKNFPKFMYVFKDFTELLDVTKVDDSLL 1906
L D FP M+ + ++L +++ L
Sbjct: 110 LKDIVFPSHMFRLQPLSQLKQKIDINEKEL 139
Score = 44.3 bits (103), Expect(2) = 7e-13
Identities = 27/118 (22%), Positives = 49/118 (41%)
Frame = -1
Query: 1820 DIIGRVVMMQSAETK*VEGRATRFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVFFL 1641
D+IG VV + + + K + G+ATR +
Sbjct: 141 DLIGMVVEINTPQDKVIAGKATRLIDFLLEDT---------------------------- 172
Query: 1640 *CSNNRVTCTLWEDYVDTILPYLEEHSREPFVIIIQMCRAKVYRGNFEFIKIIEHFSV 1467
++ CT+W+D+V + P+ + ++P +I++Q CR KV + IK+ F V
Sbjct: 173 --EGTQIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCRVKVDLSTGD-IKVCSSFDV 227
>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355484558|gb|AES65761.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 549
Score = 38.1 bits (87), Expect(3) = 1e-08
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 958 FWICGTIISFV--GDWWYLSCPHCPKKLKEAGEKLYCFGCDKFPENGNLRYL 809
F + GT+ V DWWY SC C KK+ + +C C+K N RY+
Sbjct: 289 FAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVLNVTPRYM 340
Score = 35.4 bits (80), Expect(3) = 1e-08
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -2
Query: 520 NGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 371
+ ++P DI ++++ FKV+ Y++S V ++T +P L++KF
Sbjct: 381 DASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKF 430
Score = 34.3 bits (77), Expect(3) = 1e-08
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1
Query: 728 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGKPCA 630
RY ++++VVD+T + +L+DRD +L K CA
Sbjct: 338 RYMIKMRVVDHTDSATFVLFDRDAAELFKKTCA 370
>ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355510733|gb|AES91875.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 893
Score = 36.2 bits (82), Expect(3) = 1e-07
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 958 FWICGTIISFV--GDWWYLSCPHCPKKLKEAGEKLYCFGCDKF 836
F + GT+ V DWWY SC C KK+ + +C C+K+
Sbjct: 265 FAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKY 307
Score = 34.7 bits (78), Expect(3) = 1e-07
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = -2
Query: 511 DIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 371
++P DI ++++ FKV+ Y++S V ++T +P L++KF
Sbjct: 347 EVPKDILAMVEKSYLFKVETNLGSSTMYEKSYWVKRVTADPVLVEKF 393
Score = 33.5 bits (75), Expect(3) = 1e-07
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 722 KLEIQVVDNTGNVPLLLWDRDCEKLIGKPCAILRSEHMDV 603
K I+VVD+T + +L+DRD +L K CA + +DV
Sbjct: 306 KYMIKVVDHTDSATFVLFDRDAAELFKKTCADMIESRIDV 345
>ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511049 [Cicer arietinum]
Length = 351
Score = 41.2 bits (95), Expect(3) = 7e-07
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -2
Query: 523 PNGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 371
P +P +I L++ Q FK++ K D ++++S V KL + ++IKKF
Sbjct: 238 PQSDTVPKEIGDLVEKQFLFKIEAKNDVNSNFEKSFRVKKLCGDLDIIKKF 288
Score = 30.8 bits (68), Expect(3) = 7e-07
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 728 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGKPCAILRSE 615
RY+++++VVD+T + +++D D L K C L E
Sbjct: 196 RYRIKVRVVDDTDSATFVIFDHDGISLTNKSCLNLLHE 233
Score = 29.6 bits (65), Expect(3) = 7e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 925 GDWWYLSCPHCPKKLKEAGEKLYCFGCDKF 836
GDWWY +C C K + ++ +C C K+
Sbjct: 161 GDWWYGACV-CNKGVVIESKRFFCSKCKKY 189
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 35.8 bits (81), Expect(3) = 5e-06
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 520 NGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKFA 368
N D P D+ S + + FKV+V L H R+ V + T ++I +FA
Sbjct: 378 NSSDYPSDLDSFVGKRMLFKVEVSDGNLLHNWRNYAVKRTTAEEDVINQFA 428
Score = 33.5 bits (75), Expect(3) = 5e-06
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -1
Query: 728 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGK 639
R+KL +QV+DNTG+ +L+DR+ + +
Sbjct: 337 RFKLHVQVMDNTGSTSFILFDRNVSSYVNR 366
Score = 29.3 bits (64), Expect(3) = 5e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 952 ICGTIISFVGDWWYLSCPHCPKKLKEAGEKLYCFGCD 842
ICG + W+Y +C C +++ +LYC C+
Sbjct: 295 ICGIESEY--SWYYQACTKCAGRVRTVAGRLYCGKCN 329