BLASTX nr result

ID: Rehmannia23_contig00008220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00008220
         (320 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246280.1| PREDICTED: ATP-dependent RNA helicase DBP2-l...    70   3e-10
ref|XP_004246279.1| PREDICTED: ATP-dependent RNA helicase DBP2-l...    70   3e-10
ref|XP_002326066.2| hypothetical protein POPTR_0019s151302g, par...    69   5e-10
ref|XP_006362049.1| PREDICTED: ATP-dependent RNA helicase DBP2-l...    69   8e-10
emb|CAN75572.1| hypothetical protein VITISV_009507 [Vitis vinifera]    67   3e-09
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...    66   4e-09
gb|ESW18893.1| hypothetical protein PHAVU_006G079800g [Phaseolus...    64   3e-08
ref|XP_004294724.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   5e-08
ref|XP_002319430.1| DEAD box protein P68 [Populus trichocarpa] g...    63   5e-08
gb|EMJ09647.1| hypothetical protein PRUPE_ppa003525mg [Prunus pe...    62   1e-07
ref|XP_006842508.1| hypothetical protein AMTR_s00077p00105110 [A...    61   2e-07
ref|XP_004500377.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    61   2e-07
gb|EXB56008.1| ATP-dependent RNA helicase DBP2 [Morus notabilis]       60   3e-07
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...    59   5e-07
gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]          59   7e-07

>ref|XP_004246280.1| PREDICTED: ATP-dependent RNA helicase DBP2-like isoform 2 [Solanum
           lycopersicum]
          Length = 531

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 54/96 (56%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXXXXXAGCR 211
           MSYVPPHLRNS++   TT    N+    A   +S ++   S+              +   
Sbjct: 1   MSYVPPHLRNSAAGKTTTTPTINS--IGADHFSSKHTSRISSLEKSSNGYSSSARRSSLN 58

Query: 212 SSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
            S  +  +VP+P+FP WKPS+RV RLK+EQ++E+RL
Sbjct: 59  YSLPNTFAVPDPIFPHWKPSERVLRLKSEQIEEIRL 94


>ref|XP_004246279.1| PREDICTED: ATP-dependent RNA helicase DBP2-like isoform 1 [Solanum
           lycopersicum]
          Length = 558

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 54/96 (56%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXXXXXAGCR 211
           MSYVPPHLRNS++   TT    N+    A   +S ++   S+              +   
Sbjct: 1   MSYVPPHLRNSAAGKTTTTPTINS--IGADHFSSKHTSRISSLEKSSNGYSSSARRSSLN 58

Query: 212 SSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
            S  +  +VP+P+FP WKPS+RV RLK+EQ++E+RL
Sbjct: 59  YSLPNTFAVPDPIFPHWKPSERVLRLKSEQIEEIRL 94


>ref|XP_002326066.2| hypothetical protein POPTR_0019s151302g, partial [Populus
           trichocarpa] gi|550317607|gb|EEF00448.2| hypothetical
           protein POPTR_0019s151302g, partial [Populus
           trichocarpa]
          Length = 403

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/95 (41%), Positives = 48/95 (50%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXXXXXAGCR 211
           MSY+PPHLRNSSS   TT+    T        N S+S   ST                  
Sbjct: 1   MSYIPPHLRNSSST--TTVTTRRTQSPPLTDTNLSHSSSNSTSSAPSSFSTFNSLSLRTS 58

Query: 212 SSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVR 316
           +S     SVP+PVFPQW PSDRV R   +Q++E+R
Sbjct: 59  ASVARTISVPQPVFPQWTPSDRVLRFTPDQIEEIR 93


>ref|XP_006362049.1| PREDICTED: ATP-dependent RNA helicase DBP2-like [Solanum tuberosum]
          Length = 558

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNT---GHFQAKQLNSSYSQFTSTKXXXXXXXXXXXXXA 202
           MSYVPPHLRNS++   TT    N+    HF +K  +   S   S+              +
Sbjct: 1   MSYVPPHLRNSAAGKTTTTPTINSKGADHFSSKHTSRIPSLEKSSNGYSN---------S 51

Query: 203 GCRSSGNH----VSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
             RSS N+      +VP+P FP WKPS+RV RLK+EQ++E+RL
Sbjct: 52  ARRSSLNYSLPNTVAVPDPAFPHWKPSERVLRLKSEQIEEIRL 94


>emb|CAN75572.1| hypothetical protein VITISV_009507 [Vitis vinifera]
          Length = 489

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAA-------TTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXX 190
           MSYVPPHLRN SS+ +       T+ V  +  H     L+ S +    +           
Sbjct: 1   MSYVPPHLRNPSSSJSRTSKPTETSAVTLDDTHRTTNNLSYSSTNSHLSHSNASSSXSLS 60

Query: 191 XXXAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
              +   ++     SVPEPVFPQWKPSDRV  +K EQ++EVRL
Sbjct: 61  RWASSNAAAVPRTPSVPEPVFPQWKPSDRVFXMKPEQIEEVRL 103


>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
           gi|297745752|emb|CBI15808.3| unnamed protein product
           [Vitis vinifera]
          Length = 568

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAA-------TTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXX 190
           MSYVPPHLRN SS+ +       T+ V  +  H     L+ S +    +           
Sbjct: 1   MSYVPPHLRNPSSSISRTSKPTETSAVTLDDTHRTTNNLSYSSTNSHLSHSNASSSPSLS 60

Query: 191 XXXAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
              +   ++     SVPEPVFPQWKPSDRV  +K EQ++EVRL
Sbjct: 61  RWASSNAAAVPRTPSVPEPVFPQWKPSDRVFLMKPEQIEEVRL 103


>gb|ESW18893.1| hypothetical protein PHAVU_006G079800g [Phaseolus vulgaris]
          Length = 571

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAA-------ATTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXX 190
           MSYVPPHLRN+SSA        + TL N N  H        +++   +T           
Sbjct: 1   MSYVPPHLRNNSSATVATARTPSVTLDNNNHHHHNNNHHKLAFASNNNTNANCSPSLPSF 60

Query: 191 XXXAGCRSSGN----HVSSVPEPVFPQWKPSDRVTRLKAEQVQEVR 316
              A  RSS       + + P+PVFPQW+PS+R +R+  EQ++EVR
Sbjct: 61  HN-ASRRSSAAPPSPRIFATPDPVFPQWQPSERASRMTPEQIEEVR 105


>ref|XP_004294724.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52A-like [Fragaria
           vesca subsp. vesca]
          Length = 570

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNG---------NTGHFQAKQLNSSYSQFTSTKXXXXXXXX 184
           MSYVPPHLRNSSS   TT             +    +     SS S  ++          
Sbjct: 1   MSYVPPHLRNSSSTTTTTTTTSAAAKSSSATDADRSKLSYSASSNSHSSAAPFSSFSHSN 60

Query: 185 XXXXXAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
                +   SS N   S P+ V PQWKPS+RV R+K E ++EV L
Sbjct: 61  GSRWSSAAHSSANRAISPPDAVVPQWKPSERVLRMKPELIEEVCL 105


>ref|XP_002319430.1| DEAD box protein P68 [Populus trichocarpa]
           gi|222857806|gb|EEE95353.1| DEAD box protein P68
           [Populus trichocarpa]
          Length = 559

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNT-------GHFQAKQLNSSYSQFTSTKXXXXXXXXXX 190
           MSY+PPHLRNSSS A  T    ++        H      +S+++  +ST           
Sbjct: 1   MSYIPPHLRNSSSNATITASRAHSVPPTDTNDHPNLSHSSSNFNTSSSTTFASPSR---- 56

Query: 191 XXXAGCRSSG--NHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVR 316
                 RSSG  +   SVP+PVFP W PSDRV R   +Q+ E+R
Sbjct: 57  ------RSSGAFSRTISVPQPVFPNWTPSDRVLRFNPDQIAEIR 94


>gb|EMJ09647.1| hypothetical protein PRUPE_ppa003525mg [Prunus persica]
          Length = 568

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQLN--SSYSQFTSTKXXXXXXXXXXXXXAG 205
           MSYVPPHLR+SS+   TT    +       +L+  SS S F + K             A 
Sbjct: 1   MSYVPPHLRSSSTTTTTTTETSSVTLDDQSKLSYPSSNSHFNNDKSSAASFSSFSHSNAS 60

Query: 206 CRSSG-----NHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
             SSG     N   + P+ V PQWKPS+RV R+K E ++EV L
Sbjct: 61  RWSSGSISTANRALARPDAVVPQWKPSERVLRMKPELIEEVCL 103


>ref|XP_006842508.1| hypothetical protein AMTR_s00077p00105110 [Amborella trichopoda]
           gi|548844594|gb|ERN04183.1| hypothetical protein
           AMTR_s00077p00105110 [Amborella trichopoda]
          Length = 561

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQLNS-SYSQFTSTKXXXXXXXXXXXXXAGC 208
           MSYVPPHLR SS      L + ++    ++ LNS   S   +               +  
Sbjct: 1   MSYVPPHLRASS------LPHSHSTETPSQPLNSHKLSSLYNDTASKNSFSYSSSFGSPS 54

Query: 209 RSSGNHVS-----SVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
           RS  ++VS     SVPEP+F QWKPSDRV RL  EQ+++VRL
Sbjct: 55  RSRTSNVSQPRALSVPEPIFQQWKPSDRVLRLMPEQIEDVRL 96


>ref|XP_004500377.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
           DBP2-like [Cicer arietinum]
          Length = 575

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVN-------GNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXX 190
           MSYVPPHLRN++S    T           N  H      +SS+S   S            
Sbjct: 1   MSYVPPHLRNATSTTVATTTRPSSSSTLDNHHHNTNLAFSSSHSHSHSNNNTPSFSNASR 60

Query: 191 XXXAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
              A   SS   + +VP+ VFP+W+PS+RV+R+  +Q++EVR+
Sbjct: 61  RTSAAPPSS--RILAVPDTVFPKWQPSERVSRMNPDQIEEVRI 101


>gb|EXB56008.1| ATP-dependent RNA helicase DBP2 [Morus notabilis]
          Length = 509

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
 Frame = +2

Query: 35  SYVPPHLRNSSSAAATTLVNGNTGHFQAKQLNSSYSQFTSTKXXXXXXXXXXXXXAGCRS 214
           SYVPPHLRNS S   TT  N  T   +    + +   +TS                G R 
Sbjct: 3   SYVPPHLRNSDSTTTTTTANTTTAASRVSATDFTKLSYTSN---------------GFRR 47

Query: 215 SGNHVS------SVPEPVFPQWKPSDRVTRLKAEQVQEVRL 319
           +   V       +V +PVFP WKPS+RV  +  EQ++EVRL
Sbjct: 48  TSATVPPLSKGLAVADPVFPLWKPSERVLAMNPEQIEEVRL 88


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 564

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAATTLVNGNTGHFQAKQ---LNSSYSQ--FTSTKXXXXXXXXXXXX 196
           MSYVPPHLRNS++   TT     T          L + +S    TST             
Sbjct: 1   MSYVPPHLRNSTATTTTTTTTTTTTTTTITSSITLENDHSTKLSTSTWKSLSSTLSNGSR 60

Query: 197 XAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEVR 316
                 +     SVP+PV PQW PS+RV RL ++QV++VR
Sbjct: 61  RTTAAFTSPRTLSVPDPVLPQWTPSERVLRLNSQQVEDVR 100


>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
          Length = 622

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = +2

Query: 32  MSYVPPHLRNSSSAAA--TTLVNGNTG------HFQAKQLNSSYSQFTSTKXXXXXXXXX 187
           MSYVPPHLRN+SS A   TT  + ++G      H      +SSY    S+          
Sbjct: 1   MSYVPPHLRNASSTAVATTTRPSASSGTLDHHHHNTNLAFSSSYPHSNSSSLANGSRRT- 59

Query: 188 XXXXAGCRSSGNHVSSVPEPVFPQWKPSDRVTRLKAEQVQEV 313
               +   S+ + + +VP+ VFP W+PS+RV+R+  +Q++EV
Sbjct: 60  ----SAATSAISELVTVPDTVFPNWQPSERVSRMNPDQIEEV 97


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