BLASTX nr result

ID: Rehmannia23_contig00008020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00008020
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu...    66   4e-09
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    63   5e-08
gb|EOY12922.1| F-box/RNI/FBD-like domains-containing protein, pu...    59   7e-07
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               58   2e-06

>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
           cacao]
          Length = 449

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
 Frame = +3

Query: 3   TIKVLNVFLLYNRFGYDHNVEIKINAPALRYLQLRDCVCKQISAQMLTSLIQADIVYCCF 182
           T+K L++     R  +    ++KINAP L YL L+D +  +   + ++SL++A++     
Sbjct: 226 TLKTLSISFSTGRGAH----KLKINAPILEYLNLQDNLPLEYDIENVSSLVEANVTV--- 278

Query: 183 HDGGRDYYFQSVVKFIDSLCNVKYLKLRSDMELEPVANFADPSESIRRFDYLMKLELAVD 362
                 +     +  + +L NVK L +  D             ++   F  L++LEL++ 
Sbjct: 279 -----SFLENRHIPLVKALSNVKCLSINWDWYTSLTLGSC---KTFPLFLNLVRLELSIG 330

Query: 363 ---WRFLTKFLESADNLEVLIIPQ---VRG-SLKCNWMKPKQVPTCLLSHL 494
              W  +++FLE++ NLEVL++ +    RG   +C W  PK VP CLLS L
Sbjct: 331 CGGWSVVSRFLENSHNLEVLVLAKNANCRGLGHECCWRPPKSVPKCLLSPL 381


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
 Frame = +3

Query: 3   TIKVLNVFLLYNRFGY-----DHNVEIKINAPALRYLQLRDCVCKQISAQMLTSLIQADI 167
           ++K+L +F   + F +     D + ++ ++AP L YL + D + K    + L SL++A I
Sbjct: 213 SLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFI 272

Query: 168 --------VYCCFHDGGRDYYFQSVVKFIDSLCNVKYLKLRS---DMELEPVANFADPSE 314
                        H+GG  Y+   + + +  + NVK L L     D     + ++  P+ 
Sbjct: 273 DVEQDSEEFEESPHNGGISYH-GPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPT- 330

Query: 315 SIRRFDYLMKLEL----AVDWRFLTKFLESADNLEVLIIP--QVRGSLKCNWMKPKQVPT 476
               F  + +LE       +W FL  FL S+ NLE L+I        +   W+ P QVP 
Sbjct: 331 ----FHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPA 386

Query: 477 CLLSHLR 497
           CL+ HL+
Sbjct: 387 CLVLHLK 393


>gb|EOY12922.1| F-box/RNI/FBD-like domains-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 413

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
 Frame = +3

Query: 3   TIKVLNVFLLYNRFGYDHNVEIKINAPALRYLQLRDCVCKQISAQMLTSLIQADIVYCCF 182
           T+K L++ L Y  +      +++INAP L YL+L +   +      L+SL++A+I     
Sbjct: 226 TLKSLSINLRYAEY------KLEINAPVLEYLELEESYHQVSFIGNLSSLVEANI----- 274

Query: 183 HDGGRDYYFQSVVKFIDSLCNVKYLKLRSDMELEPVAN-FADPSESIRRFDYLMKLELAV 359
                  Y  S+ + I  L NVK L L S    EPV + +A P      F  L++LE+ +
Sbjct: 275 ----HINYGISLNQLIRVLYNVKLLSLASYSYSEPVPHGYAYP-----LFLNLVQLEILI 325

Query: 360 ---DWRFLTKFLESADNLEVLIIPQVRGSLKCNWMKPKQVPTCLLSHL 494
               W  L+  L  + NL+ L++ +   ++   W +P+ VPTC+ S L
Sbjct: 326 GLPGWDVLSHLLTLSHNLQTLVV-ENNSTIDSRWTEPEHVPTCVSSRL 372


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
 Frame = +3

Query: 48  YDHNVEIKINAPALRYLQLRDCVCKQISAQMLTSLIQADIVYCCFHDGGRDY--YFQSVV 221
           Y    ++ ++AP L YL + D V +      L+SL++A +       G  D   Y   + 
Sbjct: 182 YFSKYKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIY 241

Query: 222 KFIDSLCNVKYLKLRSDMELEPVANFADPSESIRRFDYLMKLELAVDW----RFLTKFLE 389
           + +  + NVK+L L  +        F      +  F  + +LEL VD+     FL +FL+
Sbjct: 242 ELLRGISNVKHLSLSGETLHSLSGMFC--GYELPAFHSVTRLELEVDYGYGLEFLKEFLD 299

Query: 390 SADNLEVLIIPQVRGSLKC---NWMKPKQVPTCLLSHL 494
           ++ NLE+LI+  V    +C    W  P QVPTC+  HL
Sbjct: 300 TSPNLEILILENVNKD-ECEIEEWTLPLQVPTCVELHL 336


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