BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00006260
         (532 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containi...   274   8e-72
ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70
emb|CBI28908.3| unnamed protein product [Vitis vinifera]              270   1e-70
ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citr...   267   1e-69
ref|XP_006371589.1| pentatricopeptide repeat-containing family p...   262   3e-68
gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus pe...   262   3e-68
ref|XP_002329409.1| predicted protein [Populus trichocarpa]           261   7e-68
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   260   2e-67
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandif...   255   5e-66
gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandif...   254   6e-66
gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Cap...   254   6e-66
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...   254   6e-66
gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandif...   254   8e-66
gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Cap...   254   8e-66
gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Cap...   254   1e-65
gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Cap...   254   1e-65
gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandif...   253   1e-65
gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandif...   253   1e-65

>ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565401005|ref|XP_006366007.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565401007|ref|XP_006366008.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565401009|ref|XP_006366009.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565401011|ref|XP_006366010.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 711

 Score =  274 bits (701), Expect = 8e-72
 Identities = 127/174 (72%), Positives = 151/174 (86%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           LY+EM++K LDIP HAY+LVIGG CK GK +EG+ VFENM+ +G  PN++IYTALID+Y 
Sbjct: 370 LYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMIKKGIRPNLSIYTALIDSYM 429

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K+G LD AM LF R++NEGFEPDEVT+GVIVN LCKS RL+EA+QW EYCK+NNVA+N +
Sbjct: 430 KHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAMQWLEYCKKNNVAINAM 489

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YSSLIDGLGKAGR++EA +LFEEM EKGC RDSYCYN LIDALAKNGK+DEAL
Sbjct: 490 FYSSLIDGLGKAGRVDEARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEAL 543



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/158 (29%), Positives = 82/158 (51%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G C+ GK  +    F +M     EP+   Y  L+ A    G  D  +GL+H ++
Sbjct: 316 YNTMIKGYCRSGKLQKAMEKFRDMEVRKVEPDKITYMTLMQACYAEGNFDSCLGLYHEME 375

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
            +  +     Y +++   CK G++ E    FE   +  +  N+ +Y++LID   K G L+
Sbjct: 376 EKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMIKKGIRPNLSIYTALIDSYMKHGNLD 435

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA +LF+ M  +G   D   + V+++ L K+ ++DEA+
Sbjct: 436 EAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAM 473



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 56/175 (32%), Positives = 92/175 (52%)
 Frame = +1

Query: 4    KLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAY 183
            +L+ EM +KG    S+ Y+ +I  L K GK  E   +F+ M  EGC+  V  YT LI   
Sbjct: 509  ELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRMEDEGCDETVYTYTILISGM 568

Query: 184  AKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNV 363
             K  + + A+ L+H + ++G  P+  ++  +   LC SG++  A +  +      V +  
Sbjct: 569  FKEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCHSGKVARACKILDELAPMGVILET 628

Query: 364  VLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
              +  +I+ L KAGR++EA KL + +V++G         VLI+AL K G  D A+
Sbjct: 629  A-FEDMINVLCKAGRIKEACKLADGIVDRGREIPGKIRTVLINALRKTGNADMAV 682



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 52/157 (33%), Positives = 88/157 (56%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           YS +I GL K G+  E   +FE M  +GC  +   Y ALIDA AKNG++D A+ LF R++
Sbjct: 491 YSSLIDGLGKAGRVDEARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRME 550

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
           +EG +    TY ++++ + K  + EEAL+ +       +  N   + +L  GL  +G++ 
Sbjct: 551 DEGCDETVYTYTILISGMFKEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCHSGKVA 610

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
            A K+ +E+   G   ++  +  +I+ L K G++ EA
Sbjct: 611 RACKILDELAPMGVILET-AFEDMINVLCKAGRIKEA 646



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 43/172 (25%), Positives = 81/172 (47%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           +++E + KG  +   A + +I    + G   E   V+  M   G EP++  Y  L++   
Sbjct: 230 VFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFLMNGLV 289

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
            +  ++ A  +F  +++    PD VTY  ++   C+SG+L++A++ F   +   V  + +
Sbjct: 290 NSMFIESAERVFEVMESGKVNPDIVTYNTMIKGYCRSGKLQKAMEKFRDMEVRKVEPDKI 349

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDE 522
            Y +L+      G  +    L+ EM EK      + Y ++I    K GKV E
Sbjct: 350 TYMTLMQACYAEGNFDSCLGLYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLE 401



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/139 (27%), Positives = 70/139 (50%)
 Frame = +1

Query: 112 VFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLC 291
           VF     +G   NVA   +LI ++ + G ++  + ++ +++  G EP   TY  ++N L 
Sbjct: 230 VFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFLMNGLV 289

Query: 292 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 471
            S  +E A + FE  +   V  ++V Y+++I G  ++G+L++A + F +M  +    D  
Sbjct: 290 NSMFIESAERVFEVMESGKVNPDIVTYNTMIKGYCRSGKLQKAMEKFRDMEVRKVEPDKI 349

Query: 472 CYNVLIDALAKNGKVDEAL 528
            Y  L+ A    G  D  L
Sbjct: 350 TYMTLMQACYAEGNFDSCL 368



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/132 (25%), Positives = 64/132 (48%)
 Frame = +1

Query: 133 EGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEE 312
           +G   N   Y  L+   + + ELD    +F   +++GF  +      ++ S  + G +EE
Sbjct: 202 KGYAHNCECYVFLVKILSASRELDRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEE 261

Query: 313 ALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLID 492
            L  +   K N +  ++  Y+ L++GL  +  +E AE++FE M       D   YN +I 
Sbjct: 262 LLFVWRQMKENGIEPSLYTYNFLMNGLVNSMFIESAERVFEVMESGKVNPDIVTYNTMIK 321

Query: 493 ALAKNGKVDEAL 528
              ++GK+ +A+
Sbjct: 322 GYCRSGKLQKAM 333


>ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Solanum lycopersicum]
          Length = 711

 Score =  270 bits (690), Expect = 1e-70
 Identities = 126/174 (72%), Positives = 150/174 (86%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           LY+EM++K LDIP HAY+LVIGGLCK GK +EG+ VFENM+ +G  PN++IYTALID+Y 
Sbjct: 370 LYHEMEEKDLDIPPHAYTLVIGGLCKMGKVLEGFTVFENMIKKGFRPNLSIYTALIDSYM 429

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K+G LD AM LF R++NEGFEPDEVT+GVIVN LCKS RL+EA+ W EYCK N+VA+N +
Sbjct: 430 KHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAMLWLEYCKNNDVAINAM 489

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YSSLIDGLGKAGR++EA +LFEEM EKGC RDSYCYN LIDALAKNGK+DEAL
Sbjct: 490 FYSSLIDGLGKAGRVDEARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEAL 543



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/158 (29%), Positives = 84/158 (53%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G C+ GK  +    F +M     EP+   Y  ++ A   +G+ D  +GL+H ++
Sbjct: 316 YNTIIKGYCRSGKLQKAMEKFRDMEVRKVEPDKITYMTVMQACYADGDFDYCLGLYHEME 375

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
            +  +     Y +++  LCK G++ E    FE   +     N+ +Y++LID   K G L+
Sbjct: 376 EKDLDIPPHAYTLVIGGLCKMGKVLEGFTVFENMIKKGFRPNLSIYTALIDSYMKHGNLD 435

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA +LF+ M  +G   D   + V+++ L K+ ++DEA+
Sbjct: 436 EAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAM 473



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 57/175 (32%), Positives = 92/175 (52%)
 Frame = +1

Query: 4    KLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAY 183
            +L+ EM +KG    S+ Y+ +I  L K GK  E   +F+ M  EGC+  V  YT LI   
Sbjct: 509  ELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRMEDEGCDQTVYTYTILISGM 568

Query: 184  AKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNV 363
             K  + + A+ L+H + ++G  P+  ++  +   LC SG++  A +  +      V +  
Sbjct: 569  FKEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCLSGKVARACKILDELAPMGVILET 628

Query: 364  VLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
              +  +I+ L KAGRL+EA KL + +V++G         VLI+AL K G  D A+
Sbjct: 629  A-FEDMINVLCKAGRLKEACKLADGIVDRGREIPGKVRTVLINALRKTGNADMAV 682



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 52/157 (33%), Positives = 88/157 (56%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           YS +I GL K G+  E   +FE M  +GC  +   Y ALIDA AKNG++D A+ LF R++
Sbjct: 491 YSSLIDGLGKAGRVDEARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRME 550

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
           +EG +    TY ++++ + K  + EEAL+ +       +  N   + +L  GL  +G++ 
Sbjct: 551 DEGCDQTVYTYTILISGMFKEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCLSGKVA 610

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
            A K+ +E+   G   ++  +  +I+ L K G++ EA
Sbjct: 611 RACKILDELAPMGVILET-AFEDMINVLCKAGRLKEA 646



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           +++E + KG  +   A + +I    + G   E   V+  M   G EP++  Y  L++   
Sbjct: 230 VFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFLMNGLV 289

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQW-------------- 324
            +  ++ A  +F  +++    PD VTY  I+   C+SG+L++A++               
Sbjct: 290 NSMFVESAERVFEVMESGKVNPDIVTYNTIIKGYCRSGKLQKAMEKFRDMEVRKVEPDKI 349

Query: 325 --------------FEYC-------KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEM 441
                         F+YC       +  ++ +    Y+ +I GL K G++ E   +FE M
Sbjct: 350 TYMTVMQACYADGDFDYCLGLYHEMEEKDLDIPPHAYTLVIGGLCKMGKVLEGFTVFENM 409

Query: 442 VEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           ++KG   +   Y  LID+  K+G +DEA+
Sbjct: 410 IKKGFRPNLSIYTALIDSYMKHGNLDEAM 438



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/132 (25%), Positives = 64/132 (48%)
 Frame = +1

Query: 133 EGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEE 312
           +G   N   Y  L+   + + ELD    +F   +++GF  +      ++ S  + G +EE
Sbjct: 202 KGYAHNCECYVFLVKILSASCELDRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEE 261

Query: 313 ALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLID 492
            L  +   K N +  ++  Y+ L++GL  +  +E AE++FE M       D   YN +I 
Sbjct: 262 LLFVWRQMKENGIEPSLYTYNFLMNGLVNSMFVESAERVFEVMESGKVNPDIVTYNTIIK 321

Query: 493 ALAKNGKVDEAL 528
              ++GK+ +A+
Sbjct: 322 GYCRSGKLQKAM 333


>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  270 bits (690), Expect = 1e-70
 Identities = 124/174 (71%), Positives = 155/174 (89%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           LY EM+++GL+IP HAYSLVIGGLCK+G+++EG +VFENM  +GC+ NVAIYTALIDAY 
Sbjct: 317 LYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYG 376

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           KNG ++ A+ LF R++ EGFEPD+VTYGVIVN LCKSGRL+EA+++FE+CK N VA+N +
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAM 436

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YSSLIDGLGKAGR++EAEK FEEMVE+GCP+DSYCYN LIDALAK+GK++EAL
Sbjct: 437 FYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEAL 490



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 51/174 (29%), Positives = 83/174 (47%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++   + ++ ++ GL           VFE M      P+V  Y  +I  Y 
Sbjct: 212 VWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYC 271

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G    AM  F  ++    EPD++TY  ++ +    G  +  L  ++  +   + +   
Sbjct: 272 KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I GL K GR  E   +FE M +KGC  +   Y  LIDA  KNG V+EA+
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAI 385



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 53/175 (30%), Positives = 94/175 (53%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V+ +   +D  + + +  YS +I GL K G+  E    FE MV  GC  +   Y ALIDA
Sbjct: 420 VEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDA 479

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
            AK+G+++ A+ LF R++ EG +    TY ++++ L K  R EEAL+ ++      +   
Sbjct: 480 LAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPT 539

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
              + +L  GL  +G++  A K+ +E+   G   ++  +  +I+ L K G+ ++A
Sbjct: 540 TASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQA 593


>ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citrus clementina]
           gi|568877202|ref|XP_006491635.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Citrus sinensis]
           gi|557549935|gb|ESR60564.1| hypothetical protein
           CICLE_v10014552mg [Citrus clementina]
          Length = 650

 Score =  267 bits (682), Expect = 1e-69
 Identities = 124/177 (70%), Positives = 155/177 (87%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + LY+EM +KG++IPSHAY+LVIGGLCK GK +EG+A+FE+M+  GC+PNVAIYTALID+
Sbjct: 307 LSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDS 366

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK G ++ A+ +F R++ EG EPD+VTY VIV  LCK+ RLEEA+Q+FE+C+ N VA+N
Sbjct: 367 YAKLGSMNEAINIFERMKYEGVEPDDVTYRVIVGGLCKNERLEEAMQYFEFCRANGVAVN 426

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            + YSSLIDGLGKAGR++EAE+LFEEMVEKGCPRDSYCYNVLIDALAK GK+DEALA
Sbjct: 427 AMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALA 483



 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/158 (32%), Positives = 78/158 (49%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G CK GK+ +    F  M     +P+   Y  LI A    G+ D  + L+H + 
Sbjct: 255 YNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMD 314

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
            +G E     Y +++  LCK G+  E    FE   R     NV +Y++LID   K G + 
Sbjct: 315 EKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMN 374

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA  +FE M  +G   D   Y V++  L KN +++EA+
Sbjct: 375 EAINIFERMKYEGVEPDDVTYRVIVGGLCKNERLEEAM 412



 Score =  100 bits (250), Expect = 2e-19
 Identities = 56/175 (32%), Positives = 90/175 (51%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + ++  M+ +G++     Y +++GGLCK  +  E    FE     G   N   Y++LID 
Sbjct: 377 INIFERMKYEGVEPDDVTYRVIVGGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDG 436

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
             K G +D A  LF  +  +G   D   Y V++++L K G+L+EAL  F+  +       
Sbjct: 437 LGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQT 496

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  Y+ LI+G+ K  R EEA KL++ M++KG    +  +  L   L  +GKV  A
Sbjct: 497 VYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARA 551



 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 55/165 (33%), Positives = 91/165 (55%)
 Frame = +1

Query: 31  GLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMA 210
           G+ + +  YS +I GL K G+  E   +FE MV +GC  +   Y  LIDA AK G+LD A
Sbjct: 422 GVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEA 481

Query: 211 MGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDG 390
           + LF R+++EG +    TY +++N + K  R EEAL+ ++      +      + +L  G
Sbjct: 482 LALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIG 541

Query: 391 LGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           L  +G++  A K+ +E+  KG   ++  +  +I  L K G++ EA
Sbjct: 542 LCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKAGRIKEA 585



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/174 (25%), Positives = 81/174 (46%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++   + Y+ ++ GL           VF+ M      P+   Y  +I  Y 
Sbjct: 204 VWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDGVTYNTMIKGYC 263

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G+   AM  F  ++    +PD++TY  ++ +    G  +  L  +       + +   
Sbjct: 264 KVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSH 323

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            Y+ +I GL K G+  E   +FE M+ +GC  +   Y  LID+ AK G ++EA+
Sbjct: 324 AYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAI 377



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
 Frame = +1

Query: 7   LYNEMQDKG-LDIPSHAYSLV--IGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALID 177
           ++NE+++KG L   S A SL+   GGL   G   E   V+ +M   G EP++  Y  L++
Sbjct: 169 VFNELKEKGFLMTVSAANSLIKSFGGL---GMVEELLWVWRSMKENGIEPSLYTYNFLMN 225

Query: 178 AYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAM 357
               +  ++ +  +F  ++N    PD VTY  ++   CK G+ ++A++ F   +  NV  
Sbjct: 226 GLVNSMFIESSELVFKVMENGKVGPDGVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQP 285

Query: 358 NVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
           + + Y +LI      G  +    L+ EM EKG    S+ YN++I  L K GK  E  A
Sbjct: 286 DKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/127 (26%), Positives = 61/127 (48%)
 Frame = +1

Query: 148 NVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWF 327
           N+  Y +LID  A  G++D    +F+ ++ +GF         ++ S    G +EE L  +
Sbjct: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205

Query: 328 EYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKN 507
              K N +  ++  Y+ L++GL  +  +E +E +F+ M       D   YN +I    K 
Sbjct: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDGVTYNTMIKGYCKV 265

Query: 508 GKVDEAL 528
           GK  +A+
Sbjct: 266 GKTQKAM 272


>ref|XP_006371589.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550317468|gb|ERP49386.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 659

 Score =  262 bits (670), Expect = 3e-68
 Identities = 125/177 (70%), Positives = 150/177 (84%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + LY+EM + GL+IP HAYSLVIGGLCKEGK +EGYAVFE M+ +GC+ NVAIYTALID+
Sbjct: 316 LSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDS 375

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
            AK G +  AM LF R++ EG EPD VTYGV+VN +CKSGRL+EA+++ E+C+ N VA+N
Sbjct: 376 NAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVN 435

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            +LYSSLIDGLGKAGR+ EAEKLFEEMV+KGCP DSYCYN LIDALAK GK+DEALA
Sbjct: 436 AMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKIDEALA 492



 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/158 (31%), Positives = 83/158 (52%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G C+ GK+ + +  F +M      P+   Y  LI A    G+ D+ + L+H + 
Sbjct: 264 YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMD 323

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
             G E     Y +++  LCK G+  E    FE   +    +NV +Y++LID   K G + 
Sbjct: 324 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 383

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA  LFE M ++G   D   Y V+++ + K+G++DEA+
Sbjct: 384 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAM 421



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 53/165 (32%), Positives = 92/165 (55%)
 Frame = +1

Query: 31  GLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMA 210
           G+ + +  YS +I GL K G+  E   +FE MV +GC P+   Y ALIDA AK G++D A
Sbjct: 431 GVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKIDEA 490

Query: 211 MGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDG 390
           +  F R+++EG +    TY +++N L +  + EEAL+ ++      +      + +L  G
Sbjct: 491 LAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIG 550

Query: 391 LGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           L  +G++  A KL +E+   G   ++  +  +++ L K G++ EA
Sbjct: 551 LCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEA 594



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/175 (30%), Positives = 87/175 (49%)
 Frame = +1

Query: 4   KLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAY 183
           KL+ EM  KG    S+ Y+ +I  L K GK  E  A F+ M  EGC+  V  YT +I+  
Sbjct: 457 KLFEEMVKKGCPPDSYCYNALIDALAKCGKIDEALAFFKRMEDEGCDQTVYTYTIMINGL 516

Query: 184 AKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNV 363
            +  + + A+ ++  + ++G  P    +  +   LC SG++  A +  +      V    
Sbjct: 517 FREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPET 576

Query: 364 VLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
             +  +++ L KAGR++EA KL +  V++G         VLI+AL K G  D AL
Sbjct: 577 A-FEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLAL 630



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 46/174 (26%), Positives = 80/174 (45%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++     Y+ ++ GL           V E M      P+V  Y  +I  Y 
Sbjct: 213 VWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC 272

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           + G+   A   F  ++     PD++TY  ++ +    G  +  L  +     N + +   
Sbjct: 273 QVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPH 332

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I GL K G+  E   +FE+M++KGC  +   Y  LID+ AK G + EA+
Sbjct: 333 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAM 386



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/140 (27%), Positives = 66/140 (47%)
 Frame = +1

Query: 112 VFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLC 291
           V+  M   G EP++  Y  L++    +  ++ A  +   ++N    PD VTY  ++   C
Sbjct: 213 VWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC 272

Query: 292 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 471
           + G+ ++A + F   +  NVA + + Y +LI      G  +    L+ EM E G     +
Sbjct: 273 QVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPH 332

Query: 472 CYNVLIDALAKNGKVDEALA 531
            Y+++I  L K GK  E  A
Sbjct: 333 AYSLVIGGLCKEGKCVEGYA 352



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/128 (25%), Positives = 62/128 (48%)
 Frame = +1

Query: 148 NVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWF 327
           NV+   +LI ++   G ++  + ++  ++  G EP   TY  ++N L  S  +E A +  
Sbjct: 190 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 249

Query: 328 EYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKN 507
           E  +   +  +VV Y+++I G  + G+ ++A + F +M  +    D   Y  LI A    
Sbjct: 250 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 309

Query: 508 GKVDEALA 531
           G  D  L+
Sbjct: 310 GDFDLCLS 317


>gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus persica]
          Length = 654

 Score =  262 bits (670), Expect = 3e-68
 Identities = 121/175 (69%), Positives = 153/175 (87%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           LY EM++KGL+IP HAYSLVI GLCK GK MEGYAVFE+M+ +GC+ NVA YTALID+YA
Sbjct: 313 LYQEMEEKGLEIPPHAYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALIDSYA 372

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G ++ AM LF R++N+G +PD VTYGV+VN LCKSGR+EEA+++F++C+ + +A+N +
Sbjct: 373 KCGSIEGAMKLFDRMKNDGLKPDVVTYGVVVNGLCKSGRVEEAMEYFQFCEGSGMAVNAM 432

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
           LYSSLI+GLGKAGRL+EAE+LFE+M+EKGCP+DSYCYN LIDALAK GK DEALA
Sbjct: 433 LYSSLIEGLGKAGRLDEAERLFEKMIEKGCPQDSYCYNALIDALAKGGKTDEALA 487



 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 56/175 (32%), Positives = 90/175 (51%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           +KL++ M++ GL      Y +V+ GLCK G+  E    F+     G   N  +Y++LI+ 
Sbjct: 381 MKLFDRMKNDGLKPDVVTYGVVVNGLCKSGRVEEAMEYFQFCEGSGMAVNAMLYSSLIEG 440

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
             K G LD A  LF ++  +G   D   Y  ++++L K G+ +EAL  F+  +       
Sbjct: 441 LGKAGRLDEAERLFEKMIEKGCPQDSYCYNALIDALAKGGKTDEALALFKKMEEEGCDQT 500

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  Y+ LI GL K  + EEA KL++ M+++G    +  +  L   L  +GKV  A
Sbjct: 501 VYTYTILISGLFKEHKNEEALKLWDMMIDQGITPTAASFRALSIGLCLSGKVARA 555



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 48/174 (27%), Positives = 85/174 (48%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++   + Y+ ++ GL           VFE M      P+V  Y  +I  Y 
Sbjct: 208 VWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDVVTYNTMIKGYC 267

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G+   AM  F  ++    EPD++TY  ++      G  +  L  ++  +   + +   
Sbjct: 268 KAGKTQKAMEKFRAMEGRNVEPDKITYMTLIQGCYSEGDFDLCLGLYQEMEEKGLEIPPH 327

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I+GL K G+  E   +FE+M++KGC  +   Y  LID+ AK G ++ A+
Sbjct: 328 AYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALIDSYAKCGSIEGAM 381



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 51/168 (30%), Positives = 90/168 (53%)
 Frame = +1

Query: 22  QDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGEL 201
           +  G+ + +  YS +I GL K G+  E   +FE M+ +GC  +   Y ALIDA AK G+ 
Sbjct: 423 EGSGMAVNAMLYSSLIEGLGKAGRLDEAERLFEKMIEKGCPQDSYCYNALIDALAKGGKT 482

Query: 202 DMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSL 381
           D A+ LF +++ EG +    TY ++++ L K  + EEAL+ ++      +      + +L
Sbjct: 483 DEALALFKKMEEEGCDQTVYTYTILISGLFKEHKNEEALKLWDMMIDQGITPTAASFRAL 542

Query: 382 IDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
             GL  +G++  A K+ +E+   G   ++  +  +I+ L K G+  EA
Sbjct: 543 SIGLCLSGKVARACKILDELAPLGVIPET-AFEDMINVLCKAGRFKEA 589



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/172 (27%), Positives = 84/172 (48%)
 Frame = +1

Query: 16  EMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNG 195
           E+++K   + S A + +I      G   E   V+  M   G EP++  Y  L++    + 
Sbjct: 176 ELKEKNFLMNSAAANSLIKSFGCLGMVDELLWVWRRMKENGIEPSLYTYNFLVNGLVNSM 235

Query: 196 ELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYS 375
            ++ A  +F  ++     PD VTY  ++   CK+G+ ++A++ F   +  NV  + + Y 
Sbjct: 236 FIESAERVFEVMEGGKIVPDVVTYNTMIKGYCKAGKTQKAMEKFRAMEGRNVEPDKITYM 295

Query: 376 SLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
           +LI G    G  +    L++EM EKG     + Y+++I+ L K GK  E  A
Sbjct: 296 TLIQGCYSEGDFDLCLGLYQEMEEKGLEIPPHAYSLVINGLCKGGKCMEGYA 347



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/123 (26%), Positives = 59/123 (47%)
 Frame = +1

Query: 160 YTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCK 339
           Y +LID  + +G+LD    +   ++ + F  +      ++ S    G ++E L  +   K
Sbjct: 154 YVSLIDLLSSSGDLDRIRYVLAELKEKNFLMNSAAANSLIKSFGCLGMVDELLWVWRRMK 213

Query: 340 RNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVD 519
            N +  ++  Y+ L++GL  +  +E AE++FE M       D   YN +I    K GK  
Sbjct: 214 ENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDVVTYNTMIKGYCKAGKTQ 273

Query: 520 EAL 528
           +A+
Sbjct: 274 KAM 276


>ref|XP_002329409.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  261 bits (667), Expect = 7e-68
 Identities = 125/177 (70%), Positives = 149/177 (84%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + LY+EM + GL+IP HAYSLVIGGLCKEGK +EGYAVFE M+ +GC+ NVAIYTALID+
Sbjct: 257 LSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDS 316

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
            AK G +  AM LF R++ EG EPD VTYGV+VN +CKSGRL+EA+++ E+C+ N VA+N
Sbjct: 317 NAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVN 376

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            +LYSSLIDGLGKAGR+ EAEKLFEEMV+KGCP DSYCYN LIDALAK GK DEALA
Sbjct: 377 AMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALA 433



 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/158 (31%), Positives = 83/158 (52%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G C+ GK+ + +  F +M      P+   Y  LI A    G+ D+ + L+H + 
Sbjct: 205 YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMD 264

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
             G E     Y +++  LCK G+  E    FE   +    +NV +Y++LID   K G + 
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 324

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA  LFE M ++G   D   Y V+++ + K+G++DEA+
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAM 362



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/165 (32%), Positives = 91/165 (55%)
 Frame = +1

Query: 31  GLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMA 210
           G+ + +  YS +I GL K G+  E   +FE MV +GC P+   Y ALIDA AK G+ D A
Sbjct: 372 GVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEA 431

Query: 211 MGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDG 390
           +  F R+++EG +    TY +++N L +  + EEAL+ ++      +      + +L  G
Sbjct: 432 LAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIG 491

Query: 391 LGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           L  +G++  A KL +E+   G   ++  +  +++ L K G++ EA
Sbjct: 492 LCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEA 535



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 54/175 (30%), Positives = 88/175 (50%)
 Frame = +1

Query: 4   KLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAY 183
           KL+ EM  KG    S+ Y+ +I  L K GK+ E  A F+ M  EGC+  V  YT +I+  
Sbjct: 398 KLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGL 457

Query: 184 AKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNV 363
            +  + + A+ ++  + ++G  P    +  +   LC SG++  A +  +      V    
Sbjct: 458 FREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPET 517

Query: 364 VLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
             +  +++ L KAGR++EA KL +  V++G         VLI+AL K G  D AL
Sbjct: 518 A-FEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLAL 571



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 46/174 (26%), Positives = 80/174 (45%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++     Y+ ++ GL           V E M      P+V  Y  +I  Y 
Sbjct: 154 VWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC 213

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           + G+   A   F  ++     PD++TY  ++ +    G  +  L  +     N + +   
Sbjct: 214 QVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPH 273

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I GL K G+  E   +FE+M++KGC  +   Y  LID+ AK G + EA+
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAM 327



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/140 (27%), Positives = 66/140 (47%)
 Frame = +1

Query: 112 VFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLC 291
           V+  M   G EP++  Y  L++    +  ++ A  +   ++N    PD VTY  ++   C
Sbjct: 154 VWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC 213

Query: 292 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 471
           + G+ ++A + F   +  NVA + + Y +LI      G  +    L+ EM E G     +
Sbjct: 214 QVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPH 273

Query: 472 CYNVLIDALAKNGKVDEALA 531
            Y+++I  L K GK  E  A
Sbjct: 274 AYSLVIGGLCKEGKCVEGYA 293



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/128 (25%), Positives = 62/128 (48%)
 Frame = +1

Query: 148 NVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWF 327
           NV+   +LI ++   G ++  + ++  ++  G EP   TY  ++N L  S  +E A +  
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190

Query: 328 EYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKN 507
           E  +   +  +VV Y+++I G  + G+ ++A + F +M  +    D   Y  LI A    
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250

Query: 508 GKVDEALA 531
           G  D  L+
Sbjct: 251 GDFDLCLS 258


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  260 bits (664), Expect = 2e-67
 Identities = 123/175 (70%), Positives = 149/175 (85%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           LY+EM +KGL+IP H YSLVIGGLCK+GK +EGY VFENM+++GC+ NVAIYTALID+ A
Sbjct: 306 LYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNA 365

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G +  AM LF R++ EG EPDEVTYGVIVNSLCKSGRL+EAL++ E+C    VA+N +
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            YSSLIDGLGK+GR++EAE++F EMV+KGCP DSYCYN LIDALAK GK+DEALA
Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALA 480



 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/158 (32%), Positives = 82/158 (51%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G C+ GK+ + +   + M      P+   Y  LI A    G+ D  +GL+H + 
Sbjct: 252 YNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMD 311

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
            +G E     Y +++  LCK G+  E    FE         NV +Y++LID   K G + 
Sbjct: 312 EKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMG 371

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           EA  LF+ M ++G   D   Y V++++L K+G++DEAL
Sbjct: 372 EAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEAL 409



 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 52/173 (30%), Positives = 88/173 (50%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           L+  M+ +GL+     Y +++  LCK G+  E     E    +G   N   Y++LID   
Sbjct: 376 LFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLG 435

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K+G +D A  +F+ +  +G  PD   Y  ++++L K G+++EAL   +  + +     V 
Sbjct: 436 KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVY 495

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
            Y+ LI GL +  R EEA  L++ M++KG    +  +  L   L  +GKV  A
Sbjct: 496 TYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 53/166 (31%), Positives = 90/166 (54%)
 Frame = +1

Query: 28  KGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDM 207
           KG+ + +  YS +I GL K G+  E   +F  MV +GC P+   Y ALIDA AK G++D 
Sbjct: 418 KGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDE 477

Query: 208 AMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLID 387
           A+ L  R++ +G +    TY +++  L +  R EEAL  ++      +      + +L  
Sbjct: 478 ALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALST 537

Query: 388 GLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           GL  +G++  A K+ +EM   G   ++  ++ +I+ L K G++ EA
Sbjct: 538 GLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEA 582



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 53/175 (30%), Positives = 86/175 (49%)
 Frame = +1

Query: 4   KLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAY 183
           +++ EM  KG    S+ Y+ +I  L K GK  E  A+ + M  +GC+  V  YT LI   
Sbjct: 445 RIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGL 504

Query: 184 AKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNV 363
            +    + A+ L+  + ++G  P    +  +   LC SG++  A +  +      V    
Sbjct: 505 FREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET 564

Query: 364 VLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
             +  +I+ L KAGR++EA KL + +V++G         VLI+AL K G  D AL
Sbjct: 565 A-FDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLAL 618



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/174 (25%), Positives = 79/174 (45%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G++    +Y+ ++ GL           VFE M      P+V  Y  +I  Y 
Sbjct: 201 VWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYC 260

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           + G+   A      ++     PD++TY  ++ +    G  +  L  +       + +   
Sbjct: 261 EVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPH 320

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           +YS +I GL K G+  E   +FE M+ KGC  +   Y  LID+ AK G + EA+
Sbjct: 321 VYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAM 374



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/169 (24%), Positives = 82/169 (48%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++++ ++ GL +  ++ + +I      G   E   V+  M   G EP++  Y  L++   
Sbjct: 166 VFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLV 225

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
            +  ++ A  +F  ++N    PD VTY  ++   C+ G+  +A +  +  +  NVA + +
Sbjct: 226 NSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKI 285

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGK 513
            Y +LI      G  +    L+ EM EKG     + Y+++I  L K+GK
Sbjct: 286 TYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGK 334



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/126 (28%), Positives = 59/126 (46%)
 Frame = +1

Query: 148 NVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWF 327
           N+  Y +LID  A NG LD    +F + +  G      +   ++ S    G +EE L  +
Sbjct: 143 NLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVW 202

Query: 328 EYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKN 507
              K N +  ++  Y+ L++GL  +  +E AE++FE M       D   YN +I    + 
Sbjct: 203 RRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEV 262

Query: 508 GKVDEA 525
           GK  +A
Sbjct: 263 GKTRKA 268



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/158 (25%), Positives = 68/158 (43%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y  +I  L   G      +VF      G    V    +LI ++   G ++  + ++ R++
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
             G EP   +Y  +VN L  S  +E A + FE  +   +  +VV Y+++I G  + G+  
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           +A +  + M  +    D   Y  LI A    G  D  L
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCL 304


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  256 bits (653), Expect = 3e-66
 Identities = 117/177 (66%), Positives = 148/177 (83%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + LY EM+++GL+IP H+YSLVIGGLCK+ K ME YAVFE M  +GC  NVAIYTALID+
Sbjct: 310 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 369

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           Y+KNG ++ AM LF R++NEGFEPD VTY V+VN LCKSGRL++ ++ F++C+   VA+N
Sbjct: 370 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 429

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            + Y+SLIDGLGKAGR+E+AE LFEEM EKGC RDSYCYN +IDALAK+GK+D+ALA
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 486



 Score =  105 bits (261), Expect = 8e-21
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = +1

Query: 16  EMQDKGLDIPSHA-YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKN 192
           E+ D G  +P    Y+++I G CK GK  +    F +M  +  +P+   Y  LI A    
Sbjct: 244 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 303

Query: 193 GELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLY 372
            + D  + L+  ++  G E    +Y +++  LCK  +  EA   FE   +     NV +Y
Sbjct: 304 RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIY 363

Query: 373 SSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           ++LID   K G +EEA +LFE M  +G   D+  Y+VL++ L K+G++D+ +
Sbjct: 364 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGM 415



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 53/175 (30%), Positives = 91/175 (52%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L+  M+++G +  +  YS+++ GLCK G+  +G  +F+    +G   N   Y +LID 
Sbjct: 380 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 439

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
             K G ++ A  LF  +  +G   D   Y  I+++L K G++++AL  F   +       
Sbjct: 440 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 499

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  ++ LIDGL K  + EEA K +++M++KG       +  L   L   GKV  A
Sbjct: 500 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARA 554



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/175 (28%), Positives = 99/175 (56%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L++  ++KG+ I +  Y+ +I GL K G+  +   +FE M  +GC  +   Y A+IDA
Sbjct: 415 MELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 474

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
            AK+G++D A+ LF R++ EG +    T+ ++++ L K  + EEA+++++      +   
Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  + +L  GL   G++  A K+ +++   G   ++  +  +I+ L K  ++ EA
Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEA 588



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/174 (27%), Positives = 84/174 (48%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G+D   + Y+ ++ GL           VFE M      P+   Y  +I  Y 
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G+L  AM  F  ++ +  +PD++TY  ++ +       +  L  +   +   + +   
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I GL K  +  EA  +FE M +KGC  +   Y  LID+ +KNG ++EA+
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAM 380


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  256 bits (653), Expect = 3e-66
 Identities = 117/177 (66%), Positives = 148/177 (83%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + LY EM+++GL+IP H+YSLVIGGLCK+ K ME YAVFE M  +GC  NVAIYTALID+
Sbjct: 308 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 367

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           Y+KNG ++ AM LF R++NEGFEPD VTY V+VN LCKSGRL++ ++ F++C+   VA+N
Sbjct: 368 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 427

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            + Y+SLIDGLGKAGR+E+AE LFEEM EKGC RDSYCYN +IDALAK+GK+D+ALA
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 484



 Score =  105 bits (261), Expect = 8e-21
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = +1

Query: 16  EMQDKGLDIPSHA-YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKN 192
           E+ D G  +P    Y+++I G CK GK  +    F +M  +  +P+   Y  LI A    
Sbjct: 242 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 301

Query: 193 GELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLY 372
            + D  + L+  ++  G E    +Y +++  LCK  +  EA   FE   +     NV +Y
Sbjct: 302 RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIY 361

Query: 373 SSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           ++LID   K G +EEA +LFE M  +G   D+  Y+VL++ L K+G++D+ +
Sbjct: 362 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGM 413



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 53/175 (30%), Positives = 91/175 (52%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L+  M+++G +  +  YS+++ GLCK G+  +G  +F+    +G   N   Y +LID 
Sbjct: 378 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 437

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
             K G ++ A  LF  +  +G   D   Y  I+++L K G++++AL  F   +       
Sbjct: 438 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 497

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  ++ LIDGL K  + EEA K +++M++KG       +  L   L   GKV  A
Sbjct: 498 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARA 552



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/175 (28%), Positives = 99/175 (56%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L++  ++KG+ I +  Y+ +I GL K G+  +   +FE M  +GC  +   Y A+IDA
Sbjct: 413 MELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 472

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
            AK+G++D A+ LF R++ EG +    T+ ++++ L K  + EEA+++++      +   
Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
           V  + +L  GL   G++  A K+ +++   G   ++  +  +I+ L K  ++ EA
Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEA 586



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/174 (27%), Positives = 84/174 (48%)
 Frame = +1

Query: 7   LYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYA 186
           ++  M++ G+D   + Y+ ++ GL           VFE M      P+   Y  +I  Y 
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264

Query: 187 KNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVV 366
           K G+L  AM  F  ++ +  +PD++TY  ++ +       +  L  +   +   + +   
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324

Query: 367 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            YS +I GL K  +  EA  +FE M +KGC  +   Y  LID+ +KNG ++EA+
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAM 378


>gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  255 bits (651), Expect = 5e-66
 Identities = 119/177 (67%), Positives = 147/177 (83%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+A
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMA 180



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 74  IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDG 133

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 134 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRMEEEEGCDQ 193

Query: 358 NVVLYSSLIDGLGKAGRLE 414
            V  Y+ LI G+ K  R E
Sbjct: 194 TVYTYTILISGMFKDHRNE 212


>gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  254 bits (650), Expect = 6e-66
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 64  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 179



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M ++G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 74  IRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDG 133

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 134 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 193

Query: 358 NVVLYSSLIDGLGKAGRLE 414
            V  Y+ LI G+ K  R E
Sbjct: 194 TVYTYTILISGMFKDHRNE 212


>gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  254 bits (650), Expect = 6e-66
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 62  YAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 177



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           + L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 72  IXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDG 131

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 132 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 191

Query: 358 NVVLYSSLIDGLGKAGR 408
            V  Y+ LI G+ K  R
Sbjct: 192 TVYTYTILISGMFKDHR 208


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score =  254 bits (650), Expect = 6e-66
 Identities = 120/177 (67%), Positives = 145/177 (81%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KGL +P HA+SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 312 VALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 371

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK G ++ A+ L HR+ +EGF PD VTY V+VN LCK+GR+EEA+ +F+ C+ N +A+N
Sbjct: 372 YAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAIN 431

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALA 531
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDA  K+GKVDEALA
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALA 488



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 48/158 (30%), Positives = 83/158 (52%)
 Frame = +1

Query: 55  YSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQ 234
           Y+ +I G CK G++ +       M T+G E +   Y  +I A   + +    + L+  + 
Sbjct: 260 YNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMD 319

Query: 235 NEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLE 414
            +G +     + +++  LCK G+L E    FE   R     NV +Y+ LIDG  K G +E
Sbjct: 320 EKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVE 379

Query: 415 EAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
           +A +L   M+++G   D   Y+V+++ L KNG+V+EA+
Sbjct: 380 DAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAM 417



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G +     YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 382 IRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDG 441

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++  K G+++EAL  F+   +      
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQ 501

Query: 358 NVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEA 525
            V  Y+ LI G+ K  R EEA KL++ M++KG    + C   L   L  +GKV  A
Sbjct: 502 TVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARA 557



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 35/201 (17%)
 Frame = +1

Query: 31   GLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDAYAKNGELDMA 210
            GL I S  YS +I GL K G+  E   +FE M  +GC  +   Y ALIDA+ K+G++D A
Sbjct: 427  GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 486

Query: 211  MGLFHRIQNE-GFEPDEVTYGVIVNSLCKSGRLEEALQWFEY------------------ 333
            + LF R++ E G +    TY ++++ + K  R EEAL+ ++                   
Sbjct: 487  LALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALST 546

Query: 334  --CKRNNVA-----------MNVVLYSS---LIDGLGKAGRLEEAEKLFEEMVEKGCPRD 465
              C    VA           M V+L ++   +I+ L KAGR++EA KL + + E+G    
Sbjct: 547  GLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP 606

Query: 466  SYCYNVLIDALAKNGKVDEAL 528
                 V+I+AL K GK D A+
Sbjct: 607  GRIRTVMINALRKVGKADLAM 627



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 35/174 (20%)
 Frame = +1

Query: 112 VFENMVTEGCEPNVAIYTALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLC 291
           V+  M   G EP +  Y  L++       +D A  +F  +++   +PD VTY  ++   C
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYC 268

Query: 292 KSGRLEEALQWFEYCKRNNVAMNVVLY--------------------------------- 372
           K+G+ ++AL+     +   +  + + Y                                 
Sbjct: 269 KAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPH 328

Query: 373 --SSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
             S +I GL K G+L E   +FE M+ KG   +   Y VLID  AK G V++A+
Sbjct: 329 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAI 382



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/110 (27%), Positives = 58/110 (52%)
 Frame = +1

Query: 166 ALIDAYAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRN 345
           +LI ++ K G ++  + ++ +++  G EP   TY  ++N L  +  ++ A + FE  +  
Sbjct: 192 SLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251

Query: 346 NVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDA 495
            +  +VV Y+++I G  KAG+ ++A +    M  KG   D   Y  +I A
Sbjct: 252 RIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQA 301


>gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  254 bits (649), Expect = 8e-66
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 124 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 179



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 74  IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDG 133

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 134 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 193

Query: 358 NVVLYSSLIDGLGKAGRLE 414
            V  Y+ LI G+ K  R E
Sbjct: 194 TVYTYTILISGMFKDHRNE 212


>gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
           gi|341605767|gb|AEK82986.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
           gi|341605769|gb|AEK82987.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
           gi|341605771|gb|AEK82988.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  254 bits (649), Expect = 8e-66
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 177



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 72  IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDG 131

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 132 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 191

Query: 358 NVVLYSSLIDGLGKAGR 408
            V  Y+ LI G+ K  R
Sbjct: 192 TVYTYTILISGMFKDHR 208


>gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  254 bits (648), Expect = 1e-65
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAM 177



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 72  IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDG 131

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 132 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEEEEGCDQ 191

Query: 358 NVVLYSSLIDGLGKAGR 408
            V  Y+ LI G+ K  R
Sbjct: 192 TVYTYTILISGMFKDHR 208


>gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
           gi|341605729|gb|AEK82967.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  254 bits (648), Expect = 1e-65
 Identities = 118/176 (67%), Positives = 145/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 62  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
              YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 177



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M ++G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 72  IRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDG 131

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 132 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 191

Query: 358 NVVLYSSLIDGLGKAGR 408
            V  Y+ LI G+ K  R
Sbjct: 192 TVYTYTILISGMFKDHR 208


>gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  253 bits (647), Expect = 1e-65
 Identities = 118/176 (67%), Positives = 145/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C  N +A+N
Sbjct: 64  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 123

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 179



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M ++G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 74  IRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDG 133

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 134 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQ 193

Query: 358 NVVLYSSLIDGLGKAGRLE 414
            V  Y+ LI G+ K  R E
Sbjct: 194 TVYTYTILISGMFKDHRNE 212


>gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  253 bits (647), Expect = 1e-65
 Identities = 118/176 (67%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           V LY EM +KG+ +P H +SLVIGGLCKEGK  EGYAVFENM+ +G +PNVAIYT LID 
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYCKRNNVAMN 360
           YAK+G ++ A+ L HR+ +EGF+PD VTY V+VN LCK+GR+EEAL +F+ C+ N +A+N
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 361 VVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEAL 528
            + YSSLIDGLGKAGR++EAE+LFEEM EKGC RDSYCYN LIDAL K+GKVDEA+
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 179



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VKLYNEMQDKGLDIPSHAYSLVIGGLCKEGKSMEGYAVFENMVTEGCEPNVAIYTALIDA 180
           ++L + M D+G       YS+V+ GLCK G+  E    F+     G   N   Y++LID 
Sbjct: 74  IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDG 133

Query: 181 YAKNGELDMAMGLFHRIQNEGFEPDEVTYGVIVNSLCKSGRLEEALQWFEYC-KRNNVAM 357
             K G +D A  LF  +  +G   D   Y  ++++L K G+++EA+  F+   +      
Sbjct: 134 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQ 193

Query: 358 NVVLYSSLIDGLGKAGRLE 414
            V  Y+ LI G+ K  R E
Sbjct: 194 TVYTYTILISGMFKDHRNE 212