BLASTX nr result
ID: Rehmannia23_contig00006058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006058
(526 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi... 144 9e-33
ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, put... 144 9e-33
ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citr... 143 2e-32
ref|XP_004245945.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein... 141 1e-31
ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containi... 138 7e-31
gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis] 135 6e-30
emb|CDL67990.1| putative pentatricopeptide repeat-containing pro... 130 2e-28
ref|XP_006368339.1| pentatricopeptide repeat-containing family p... 129 4e-28
ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
gb|ESW30211.1| hypothetical protein PHAVU_002G134100g [Phaseolus... 123 3e-26
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi... 123 3e-26
gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus pe... 122 6e-26
ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera] 114 2e-23
ref|XP_003612704.1| Pentatricopeptide repeat-containing protein ... 106 3e-21
ref|XP_002326752.1| predicted protein [Populus trichocarpa] 103 2e-20
>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
protein product [Vitis vinifera]
Length = 605
Score = 144 bits (364), Expect = 9e-33
Identities = 71/115 (61%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEK--KSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGF 168
M+ SVL+Q L+S+E +SP++ F L KEC+SLLK C NM+EFKQ H +ILKLG
Sbjct: 1 MIRTSVLHQTH-VLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGL 59
Query: 167 FWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
F SFCASNLV+TCALS+WGSMDYACSIF Q+D SF+FNTM+RG+ KD N++E
Sbjct: 60 FGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEE 114
>ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
gi|223541982|gb|EEF43528.1| GTP-binding protein alpha
subunit, gna, putative [Ricinus communis]
Length = 1203
Score = 144 bits (364), Expect = 9e-33
Identities = 67/110 (60%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQE-KKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGFF 165
M+G +VL+Q L ++ +SP++ +K +EC+SLLK C+NM+EF+Q H QILK GFF
Sbjct: 862 MIGTTVLHQIHILLPPEDPSESPEVSLRVKEQECLSLLKRCQNMEEFRQAHAQILKWGFF 921
Query: 164 WSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDF 15
+ FCASNLV+TCALS WGSMDYACSIF QID P SFE+NTMI+GY DF
Sbjct: 922 SNPFCASNLVATCALSHWGSMDYACSIFRQIDQPGSFEYNTMIKGYVSDF 971
>ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citrus clementina]
gi|568834767|ref|XP_006471474.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Citrus sinensis]
gi|557534799|gb|ESR45917.1| hypothetical protein
CICLE_v10000638mg [Citrus clementina]
Length = 605
Score = 143 bits (361), Expect = 2e-32
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 3/116 (2%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEK---KSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLG 171
M SVL+Q L++Q + K P+++ LK +EC+++LKTCKN++EFK+VH +LK G
Sbjct: 1 MTRTSVLHQ--SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWG 58
Query: 170 FFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
FFW+ FCASNLV+TCALS WGSMDYACSIF QID P +F+FN++IRG+ KD +E
Sbjct: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEE 114
>ref|XP_004245945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Solanum lycopersicum]
Length = 605
Score = 142 bits (359), Expect = 4e-32
Identities = 73/115 (63%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQE--KKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGF 168
MV SVL Q FLI +E K+ +++F+LK +E IS++K C NM+E KQVH QILKLGF
Sbjct: 1 MVRTSVLYQTP-FLIPKEYHAKAQELNFSLKEQEWISMIKKCNNMRELKQVHGQILKLGF 59
Query: 167 FWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
SSFCA NL+STCALSEWGSMDYAC IF++ID P SFE+NT+IRGY KD N +E
Sbjct: 60 ICSSFCAGNLLSTCALSEWGSMDYACLIFDEIDDPGSFEYNTVIRGYVKDMNLEE 114
>gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 703
Score = 141 bits (355), Expect = 1e-31
Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Frame = -3
Query: 353 INEIMVGASVLNQPQQF-LISQEKKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILK 177
++ M G SVL Q + F L + +S ++ LK +EC S+LK CKNM+EF+Q H QI+K
Sbjct: 95 VDNRMPGTSVLQQTKFFSLPADPPQSLELSLRLKEQECFSILKRCKNMEEFRQAHAQIVK 154
Query: 176 LGFFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
GFFW+SFCASNLV+ CALS+ GSMDYACSIF+QID P +FEFNTMIR + KD +E
Sbjct: 155 WGFFWNSFCASNLVAACALSDGGSMDYACSIFQQIDEPGTFEFNTMIRAHVKDMTFEE 212
>ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Solanum tuberosum]
Length = 605
Score = 138 bits (348), Expect = 7e-31
Identities = 71/115 (61%), Positives = 88/115 (76%), Gaps = 2/115 (1%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQE--KKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGF 168
MV SVL Q FLI +E K+ + +F+LK +E IS++K C +M+E KQVH QILKLGF
Sbjct: 1 MVRTSVLYQTP-FLIPKEYHAKAQEFNFSLKEQEWISMIKKCNSMRELKQVHGQILKLGF 59
Query: 167 FWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
SSFC+ NL+STCALSEWGSMDYAC IF++ID P SFE+NT+IRGY KD N +E
Sbjct: 60 ICSSFCSGNLLSTCALSEWGSMDYACLIFDEIDDPRSFEYNTVIRGYVKDMNLEE 114
>gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis]
Length = 605
Score = 135 bits (340), Expect = 6e-30
Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEK-KSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGFF 165
M G SVLNQ L ++E +SP+ +LK +EC+SLLK CK+++E KQ+H QILK+G
Sbjct: 1 MTGTSVLNQTHLLLPAKEPIQSPEFHLSLKEQECLSLLKRCKSVRELKQIHVQILKIGLL 60
Query: 164 WSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
SFCA NLV+TCALS+WGSMDYACSIF + P +F FNTM+RG+ KD N
Sbjct: 61 GDSFCAGNLVATCALSDWGSMDYACSIFRHVKEPQTFLFNTMMRGHVKDGN 111
>emb|CDL67990.1| putative pentatricopeptide repeat-containing protein At1g31920,
partial [Olea europaea]
Length = 199
Score = 130 bits (326), Expect = 2e-28
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = -3
Query: 233 LKTCKNMKEFKQVHCQILKLGFFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSF 54
LK CKNM+EFKQ+H QI+K GF WSSFC+SNL++TCALSEWGSMDYACSIF QI+ P SF
Sbjct: 3 LKKCKNMQEFKQIHGQIIKFGFLWSSFCSSNLLATCALSEWGSMDYACSIFHQIEDPGSF 62
Query: 53 EFNTMIRGYTKDFNSKE 3
EFNTMIRG+ KD N E
Sbjct: 63 EFNTMIRGHNKDVNFAE 79
>ref|XP_006368339.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550346246|gb|ERP64908.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 602
Score = 129 bits (324), Expect = 4e-28
Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEK--KSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGF 168
M+G VL Q +FL E ++ + LK +EC+SL+K CKNM+EFKQVH Q+LK
Sbjct: 1 MIGTPVL-QKIRFLSLPEAPTQTTGLSLKLKEQECLSLMKRCKNMEEFKQVHAQVLK--- 56
Query: 167 FW-SSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
W +SFCASNLV+TCALS+WGSMDYACSIF QID P +FEFNTMIRGY N
Sbjct: 57 -WENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMN 108
>ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 129 bits (324), Expect = 4e-28
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEKKSPDIDFNLKGKE--CISLLKTCKNMKEFKQVHCQILKLGF 168
M+G SVLN L S++ + NLK KE + L+K CK+++EFKQVH QILK G
Sbjct: 1 MMGTSVLNYNHHLLPSKDLPQSSSELNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGL 60
Query: 167 FWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
F SFC+S++++TCALS+W SMDYACSIF+Q+D P++F+FNTMIRGY + N
Sbjct: 61 FLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMN 112
>gb|ESW30211.1| hypothetical protein PHAVU_002G134100g [Phaseolus vulgaris]
Length = 605
Score = 123 bits (308), Expect = 3e-26
Identities = 67/113 (59%), Positives = 78/113 (69%), Gaps = 3/113 (2%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEKKSP-DIDFNLKGKE--CISLLKTCKNMKEFKQVHCQILKLG 171
M G SVL Q L+S P + + N K E +SLLK CK+M+EFKQVH QILKLG
Sbjct: 1 MSGTSVLCQSH--LLSLPNNPPQNSELNAKFNEQGWLSLLKRCKSMEEFKQVHAQILKLG 58
Query: 170 FFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
F SFC SNLV+TCALS WGSM+YACSIF QI+ P SFE+NTMIRG + N
Sbjct: 59 LFLDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNNMN 111
>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 123 bits (308), Expect = 3e-26
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = -3
Query: 266 FNLKGKECISLLKTCKNMKEFKQVHCQILKLGFFWSSFCASNLVSTCALSEWGSMDYACS 87
FN++G +SLLK CK+M+EFKQVH ILKLG F+ SFC SNLV+TCALS WGSM+YACS
Sbjct: 29 FNVQG---LSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACS 85
Query: 86 IFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
IF QI+ P SFE+NTMIRG N +E
Sbjct: 86 IFRQIEEPGSFEYNTMIRGNVNSMNLEE 113
>gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus persica]
Length = 602
Score = 122 bits (305), Expect = 6e-26
Identities = 63/111 (56%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = -3
Query: 341 MVGASVLNQPQQFLISQEKKS-PDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGFF 165
M GA VLNQ FL S+ P+ K +E +SLLK C+NM+E KQVH ILKLG F
Sbjct: 1 MTGAPVLNQTHLFLPSKTPLGCPETSSRSKEQESLSLLKRCRNMEELKQVHAHILKLGHF 60
Query: 164 WSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
SFCA NLV+T ALS WGSMD+ACSIF+QI+ P +F NTMI+G+ K N
Sbjct: 61 CDSFCAGNLVATSALSAWGSMDHACSIFQQINEPGTFVCNTMIKGHVKAMN 111
>ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 121 bits (303), Expect = 1e-25
Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Frame = -3
Query: 341 MVGASVLNQPQQF-LISQEKKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGFF 165
M G SVL Q L + +S +++ + +SLLK CK+M+EFKQVH ILKLG F
Sbjct: 1 MSGTSVLCQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLF 60
Query: 164 WSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
+ SFC SNLV++CALS WGSM+YACSIF QI+ P SFE+NTMIRG + +E
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEE 114
>ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 119 bits (298), Expect = 4e-25
Identities = 60/114 (52%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Frame = -3
Query: 341 MVGASVLNQPQQF-LISQEKKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGFF 165
M G SVL Q L + +S +++ + +SLLK CK+M+EFK+VH ILKLG F
Sbjct: 1 MSGTSVLCQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLF 60
Query: 164 WSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
+ SFC SNLV++CALS WGSM+YACSIF QI+ P SFE+NTMIRG + +E
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEE 114
>ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cicer arietinum]
Length = 606
Score = 119 bits (297), Expect = 5e-25
Identities = 62/116 (53%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Frame = -3
Query: 341 MVGASVLNQPQQFLI---SQEKKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLG 171
M G + LNQ L+ S + FN KG C LLK C NM+EFKQVH LK G
Sbjct: 1 MTGTTALNQTHFLLLTNNSHQSFELSKSFNEKGWLC--LLKRCNNMEEFKQVHAYFLKCG 58
Query: 170 FFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFNSKE 3
F+ SFC SNLV+TCAL++WGSMDYACSIF QI+ P SF++NTMIRG + E
Sbjct: 59 IFFDSFCGSNLVATCALTKWGSMDYACSIFTQIEEPCSFDYNTMIRGNVNNMKLDE 114
>ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Fragaria vesca subsp. vesca]
Length = 606
Score = 119 bits (297), Expect = 5e-25
Identities = 62/112 (55%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = -3
Query: 341 MVGASVLNQPQQFL--ISQEKKSPDIDFNLKGKECISLLKTCKNMKEFKQVHCQILKLGF 168
M G +VLN L + S ++ F LK +E +SLLK CKN++EFKQVH ILKLG
Sbjct: 1 MTGTTVLNLQTHLLLPVKDPPGSQELSFRLKEQESLSLLKRCKNLEEFKQVHSHILKLGV 60
Query: 167 FWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMIRGYTKDFN 12
SF A NLV+T LS WGSMDYACSIFEQI+ P SF NTMI+G+ K N
Sbjct: 61 SCDSFVAGNLVATNVLSAWGSMDYACSIFEQIEEPGSFVCNTMIKGHVKALN 112
>emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 114 bits (284), Expect = 2e-23
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = -3
Query: 215 MKEFKQVHCQILKLGFFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTMI 36
M+EFKQ H +ILK G F SFCASNLV+TCALS+WGSMDYACSIF Q+D P SF+FNTM+
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60
Query: 35 RGYTKDFNSKE 3
RG+ KD N++E
Sbjct: 61 RGHVKDMNTEE 71
>ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 572
Score = 106 bits (265), Expect = 3e-21
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -3
Query: 218 NMKEFKQVHCQILKLGFFWSSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTM 39
+M+EFKQVH +LK G F+ +FC SNLV+TCAL++WGSMDYACSIF QID PSSF++NTM
Sbjct: 10 HMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTM 69
Query: 38 IRGYTKDFNSKE 3
IRG D +E
Sbjct: 70 IRGNVNDMKLEE 81
>ref|XP_002326752.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 103 bits (257), Expect = 2e-20
Identities = 50/69 (72%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 215 MKEFKQVHCQILKLGFFW-SSFCASNLVSTCALSEWGSMDYACSIFEQIDYPSSFEFNTM 39
M+EFKQVH Q+LK W +SFCASNLV+TCALS+WGSMDYACSIF QID P +FEFNTM
Sbjct: 1 MEEFKQVHAQVLK----WENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTM 56
Query: 38 IRGYTKDFN 12
IRGY N
Sbjct: 57 IRGYVNVMN 65