BLASTX nr result

ID: Rehmannia23_contig00004845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00004845
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249736.1| PREDICTED: UPF0481 protein At3g47200-like [S...    62   6e-08
ref|XP_006351383.1| PREDICTED: UPF0481 protein At3g47200-like [S...    60   4e-07

>ref|XP_004249736.1| PREDICTED: UPF0481 protein At3g47200-like [Solanum lycopersicum]
           gi|133711801|gb|ABO36619.1| hypothetical protein
           LYC_68t000001 [Solanum lycopersicum]
           gi|133711816|gb|ABO36633.1| hypothetical protein
           SUNLYC_67t000002 [Solanum lycopersicum]
          Length = 486

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
 Frame = -1

Query: 373 EEDQWEALLYKFLSEMNFGDDRLSKIPWDDKEREPLHILEAHRATLTNIGTIKPTANVHH 194
           ++D+ + LL  FL+   FG+         +   EPLH+LEA R  L     +   + V  
Sbjct: 220 DKDEGDELLEMFLNFTLFGEYEQEGEMSHNHVEEPLHLLEAFRTRL-----VSQQSEVRS 274

Query: 193 HRRIFRFQW-GRKKAASQSSV-FETVNSQFRSVTYLKAKSIHFGPS-SNCLTDIRFNSYL 23
             R    QW  RKK+ S   V  ++    FRSVT LKAK I F PS ++ L DI+F S  
Sbjct: 275 FHRTCTPQWLKRKKSISNERVNMKSYIHSFRSVTDLKAKGIQFKPSCTHSLKDIKFKSRY 334

Query: 22  FYGKLQL 2
           FYG+L L
Sbjct: 335 FYGQLVL 341


>ref|XP_006351383.1| PREDICTED: UPF0481 protein At3g47200-like [Solanum tuberosum]
          Length = 486

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
 Frame = -1

Query: 373 EEDQWEALLYKFLSEMNFGD-DRLSKIPWDDKEREPLHILEAHRATLTNIGTIKPTANVH 197
           ++++ + LL  FL+   FG+ ++  ++ ++  E EPLH+LEA R  L     +   + V 
Sbjct: 220 DKNEGDELLEMFLNFTLFGEYEQKGEMSYNHVE-EPLHLLEAFRTRL-----VSQQSEVR 273

Query: 196 HHRRIFRFQW-GRKKAASQSSV-FETVNSQFRSVTYLKAKSIHFGPS-SNCLTDIRFNSY 26
           +  R    QW  RKK+     V  ++    FRSVT LKAK I F PS ++ L DI+F S 
Sbjct: 274 NFHRTCTPQWLKRKKSICNDRVNMKSYIHSFRSVTDLKAKGIQFKPSCTHSLKDIKFKSR 333

Query: 25  LFYGKLQL 2
            FYG+L L
Sbjct: 334 YFYGQLVL 341


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