BLASTX nr result
ID: Rehmannia23_contig00004190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00004190
(633 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera] 120 3e-25
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 113 4e-23
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 110 3e-22
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 107 2e-21
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 104 2e-20
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 104 2e-20
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 102 1e-19
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 100 3e-19
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 99 1e-18
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 98 2e-18
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 98 2e-18
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 98 2e-18
ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666... 97 3e-18
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 97 4e-18
gb|AAB82754.1| retrofit [Oryza longistaminata] 97 5e-18
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 96 1e-17
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 96 1e-17
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 95 2e-17
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 94 2e-17
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 94 2e-17
>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
Length = 1099
Score = 120 bits (301), Expect = 3e-25
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTM 181
K DY+F KVFGC+C+ YLRPYN+HKF FRS+KC+F+GYSP HKGYRCL SG+IY+A ++
Sbjct: 464 KLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFLGYSPXHKGYRCLSXSGQIYVAKSI 523
Query: 182 SFNEDEFRYSSLFS 223
+FNE++F YS+L +
Sbjct: 524 TFNENDFPYSTLLT 537
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 113 bits (283), Expect = 4e-23
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTM 181
K DY+F KVFGC+C+PYLR YN+HKF F+S+KC+F+GYSP H GYRC S +IY+A +
Sbjct: 490 KPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFLGYSPAHNGYRCFSSSNRIYVAKLV 549
Query: 182 SFNEDEFRYSSLFS 223
+FNE++F YS+LF+
Sbjct: 550 TFNENDFPYSTLFT 563
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 110 bits (276), Expect = 3e-22
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
D +FLK FGC CFP+LRPYN+HK QFRSSKC+F+GYS HKGY CL P GKIYI+ + F
Sbjct: 88 DSHFLKTFGCTCFPHLRPYNSHKLQFRSSKCLFLGYSSTHKGYLCLHPFGKIYISRNVIF 147
Query: 188 NEDEFRYSSLFSI 226
NE EF YS L +
Sbjct: 148 NEHEFPYSELLGL 160
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Frame = +2
Query: 455 HPMITRSKLGIFKPKTFSAI-------LNTSEPSTVMEALSHPKWKEARDAEYSALIKNH 613
HPMITR+K GIFKPK ++A+ L + EP V + L+ P WK A EY AL++N
Sbjct: 245 HPMITRAKAGIFKPKVYAALKHPLSFSLGSIEPMCVKQVLADPNWKIAMKEEYKALMRND 304
Query: 614 TWDLVP 631
TWDLVP
Sbjct: 305 TWDLVP 310
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 107 bits (268), Expect = 2e-21
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
DY+ L+VFGC+CFP+LRPYN+HK +RS +C+F+GYS HKGY+CL P+G IYI+ + F
Sbjct: 786 DYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTAHKGYKCLAPNGHIYISKDVLF 845
Query: 188 NEDEFRYSSLFSISP 232
E +F YS+LF P
Sbjct: 846 QESKFPYSTLFHTIP 860
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 104 bits (260), Expect = 2e-20
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
DY L+VFGCACFPYLRPYN HK FRS++CVFIGYS HKGY+CL SG++Y+++ + F
Sbjct: 141 DYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSSSHKGYQCLHSSGRVYVSNHVIF 200
Query: 188 NEDEFRYSSLFSISPLSQ 241
+E F Y S S ++Q
Sbjct: 201 DEQSFPYVSGSDFSSIAQ 218
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/60 (63%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Frame = +2
Query: 455 HPMITRSKLGIFKPKTFSAILNT--SEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLV 628
HPMITRSK GIFKPK+F A L SEP++V ALS PKW +A E+ AL NHTWDLV
Sbjct: 297 HPMITRSKAGIFKPKSFLAALLAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNHTWDLV 356
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 104 bits (259), Expect = 2e-20
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
DY+FLKVFGC+CFP LRPYN HK Q+RS +C F+GYS HKGY+C+ +G++YI+ + F
Sbjct: 741 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIF 800
Query: 188 NEDEFRYSSLFSIS 229
NE F YS +S
Sbjct: 801 NETSFPYSKTIQVS 814
Score = 67.8 bits (164), Expect = 3e-09
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +2
Query: 455 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 631
HPMITR+K GI KPK F A + EPS+V AL +WK+A AEY AL +N+TW LVP
Sbjct: 914 HPMITRAKSGIVKPKIFIAAIR--EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVP 970
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 102 bits (253), Expect = 1e-19
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
DY+FLKVFGC+CFP LRPYN HK Q+RS +C F+GYS HKGY+C+ +G++YI+ + F
Sbjct: 323 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMFSNGRVYISRDVIF 382
Query: 188 NEDEFRYSSLFSIS 229
NE F YS S
Sbjct: 383 NETSFSYSKTIQAS 396
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 455 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 631
HPMITR K GI KPK F I+ EPS+V A +WK+ AEY AL +N+TW LVP
Sbjct: 496 HPMITRGKSGIVKPKIF--IVAVREPSSVAAAFQQDEWKKTMVAEYDALQRNNTWSLVP 552
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 100 bits (249), Expect = 3e-19
Identities = 42/71 (59%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 184
DYN L+VFGCAC+P+LRPYN K QFRS +C F+GYSP HKG++CL PS G++YI+ +
Sbjct: 473 DYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVI 532
Query: 185 FNEDEFRYSSL 217
F+E+ F ++SL
Sbjct: 533 FDENVFPFASL 543
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 99.0 bits (245), Expect = 1e-18
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 187
+Y+FLKVFGC+CFP LRPYN HK Q+ S +C F+GYS HKGY C+ +G++YI+ + F
Sbjct: 562 BYSFLKVFGCSCFPNLRPYNTHKLQYXSEECTFLGYSLKHKGYXCMSSNGRVYISRDVIF 621
Query: 188 NEDEFRYSSLFSI-----SPLSQLLIHLLP 262
NE F YS S +S HL P
Sbjct: 622 NETSFPYSKTIQASSCLPSTVSPFTSHLSP 651
Score = 68.2 bits (165), Expect = 2e-09
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +2
Query: 455 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 631
HPMITR+K GIFKPK F I+ EPS+V AL +WK+A EY AL +N+TW LVP
Sbjct: 715 HPMITRTKSGIFKPKFF--IVAVREPSSVATALQQDEWKKAMVVEYDALQRNNTWSLVP 771
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCL-GPSGKIYIASTMS 184
DY FL+VFGC C+P++RPYNNHK Q+RS KCVF+GYS HKGY CL +G++Y++ +
Sbjct: 702 DYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVV 761
Query: 185 FNEDEFRYSSLFSISP 232
F+E +F ++ S SP
Sbjct: 762 FDETQFPFAQNISSSP 777
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCL-GPSGKIYIASTMS 184
DY FL+VFGC C+P++RPYNNHK Q+RS KCVF+GYS HKGY CL +G++Y++ +
Sbjct: 652 DYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVV 711
Query: 185 FNEDEFRYSSLFSISP 232
F+E +F ++ S SP
Sbjct: 712 FDETQFPFAQNISSSP 727
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 98.2 bits (243), Expect = 2e-18
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIAST 178
K DYN L+VFGCAC+P LRPYN HK QFRS+ C F+GYS HKG++CL PS G++YI+
Sbjct: 671 KPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRD 730
Query: 179 MSFNEDEFRYSSL 217
+ F+E +F ++ L
Sbjct: 731 VVFDETQFPFTKL 743
>ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
Length = 651
Score = 97.4 bits (241), Expect = 3e-18
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCL-GPSGKIYIASTMS 184
DYNFL+ FGCAC+P L PYNN KFQ+RS +C+F+GYS H+GY+CL SG+IYI+ +
Sbjct: 561 DYNFLRAFGCACYPLLTPYNNPKFQYRSKECIFMGYSTSHRGYKCLDNKSGRIYISKDVL 620
Query: 185 FNEDEFRY 208
FNE F Y
Sbjct: 621 FNEKHFPY 628
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 97.1 bits (240), Expect = 4e-18
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 184
DY+ L+VFGCAC+P+LRPYN HK QFRS +C F+GYS HKG++CL PS G++YI+ +
Sbjct: 675 DYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVI 734
Query: 185 FNEDEFRYSSL 217
F+E F ++ L
Sbjct: 735 FDETNFPFAKL 745
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 96.7 bits (239), Expect = 5e-18
Identities = 42/75 (56%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKIYIAST 178
K DY+ L+VFGCAC+P+LRPYN HK QFRS +CVF+G+S HKG++CL SG++YI+
Sbjct: 673 KPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRD 732
Query: 179 MSFNEDEFRYSSLFS 223
+ F+E+ F +S+L S
Sbjct: 733 VVFDENVFPFSTLHS 747
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 95.5 bits (236), Expect = 1e-17
Identities = 39/73 (53%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 184
DY+ L++FGC C+P LRPYN+HK QFRS +CVF+GYS HKG++CL S G++Y++ ++
Sbjct: 522 DYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVT 581
Query: 185 FNEDEFRYSSLFS 223
F+E+ F ++SL S
Sbjct: 582 FDENFFPFASLHS 594
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 95.5 bits (236), Expect = 1e-17
Identities = 39/73 (53%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 184
DY+ L++FGC C+P LRPYN+HK QFRS +CVF+GYS HKG++CL S G++Y++ ++
Sbjct: 522 DYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVT 581
Query: 185 FNEDEFRYSSLFS 223
F+E+ F ++SL S
Sbjct: 582 FDENFFPFASLHS 594
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 94.7 bits (234), Expect = 2e-17
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKIYIAST 178
K DY L+VFGCAC+P+LRPYN HK QFRS +CVF+G+S HKG++CL SG++YI+
Sbjct: 673 KPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRD 732
Query: 179 MSFNEDEFRYSSLFS 223
+ F+E+ F +S+L S
Sbjct: 733 VVFDENIFPFSTLHS 747
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 94.4 bits (233), Expect = 2e-17
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 184
DY+ L++FGCAC+P LRPYN HK QFRS++CVF+GYS HKG++CL S G+IYI+ +
Sbjct: 675 DYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVV 734
Query: 185 FNEDEFRYSSL 217
F+E F ++SL
Sbjct: 735 FDEHVFPFASL 745
Score = 57.4 bits (137), Expect = 3e-06
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 8/63 (12%)
Frame = +2
Query: 467 TRSKLGIFKPKTFS--------AILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWD 622
TR + GI KPK F+ A +EPS+V EAL+ P+W+ A +AE+ AL KN+TW
Sbjct: 896 TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955
Query: 623 LVP 631
LVP
Sbjct: 956 LVP 958
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 94.4 bits (233), Expect = 2e-17
Identities = 41/73 (56%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 KFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIAST 178
K DY+ L++FGCAC+P LRPYNNHK QFRS +CVF+G+S HKG++CL S G+IYI+
Sbjct: 667 KPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRD 726
Query: 179 MSFNEDEFRYSSL 217
+ F+E+ F ++ L
Sbjct: 727 VVFDENIFPFTEL 739