BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00003992
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21248.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   232   3e-59
ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citr...   231   1e-58
gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]               230   1e-58
ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609...   229   3e-58
ref|XP_004231740.1| PREDICTED: transcription-repair-coupling fac...   228   8e-58
ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592...   227   1e-57
ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutr...   226   3e-57
ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutr...   226   3e-57
gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus pe...   226   3e-57
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]     226   3e-57
gb|ESW33797.1| hypothetical protein PHAVU_001G099500g [Phaseolus...   224   9e-57
gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fung...   224   9e-57
ref|XP_003624531.1| Transcription-repair-coupling factor [Medica...   224   9e-57
ref|XP_004493106.1| PREDICTED: transcription-repair-coupling fac...   224   1e-56
ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Caps...   224   1e-56
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab...   223   2e-56
ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Popul...   222   3e-56
gb|EXB41421.1| Transcription-repair-coupling factor [Morus notab...   222   4e-56
ref|XP_004306326.1| PREDICTED: transcription-repair-coupling fac...   222   4e-56

>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  232 bits (592), Expect = 3e-59
 Identities = 116/131 (88%), Positives = 124/131 (94%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 90  DQKQAFIDVEEDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 149

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVI+ERFS+Y + KVGLLSRFQT +EKE HL+MIKHGDLDIIVGTHSLLG+RVVY+
Sbjct: 150 KQHFDVITERFSKYPNIKVGLLSRFQTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYS 209

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 210 NLGLLVVDEEQ 220


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  232 bits (592), Expect = 3e-59
 Identities = 116/131 (88%), Positives = 124/131 (94%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 273 DQKQAFIDVEEDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVI+ERFS+Y + KVGLLSRFQT +EKE HL+MIKHGDLDIIVGTHSLLG+RVVY+
Sbjct: 333 KQHFDVITERFSKYPNIKVGLLSRFQTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYS 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citrus clementina]
           gi|557549492|gb|ESR60121.1| hypothetical protein
           CICLE_v10017439mg [Citrus clementina]
          Length = 835

 Score =  231 bits (588), Expect = 1e-58
 Identities = 115/131 (87%), Positives = 122/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQK+A +DVERDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 285 DQKKAFLDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 344

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDV+SERFS+Y   KVGLLSRFQ+K+EKE HL MIKHG L+IIVGTHSLLG RVVYN
Sbjct: 345 KQHFDVVSERFSKYPDIKVGLLSRFQSKAEKEEHLDMIKHGHLNIIVGTHSLLGSRVVYN 404

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 405 NLGLLVVDEEQ 415


>gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]
          Length = 1251

 Score =  230 bits (587), Expect = 1e-58
 Identities = 117/131 (89%), Positives = 122/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAG+QAMVLAPTIVLA
Sbjct: 285 DQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGRQAMVLAPTIVLA 344

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS+Y S KVGLLSRFQTK+EKE HL MIK GDL IIVGTHSLLG RVVYN
Sbjct: 345 KQHFDVISERFSKYPSTKVGLLSRFQTKAEKEEHLNMIKKGDLAIIVGTHSLLGSRVVYN 404

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 405 NLGLLVVDEEQ 415


>ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609921 [Citrus sinensis]
          Length = 835

 Score =  229 bits (584), Expect = 3e-58
 Identities = 115/131 (87%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQK+A +DVERDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 285 DQKKAFIDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 344

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDV+SERFS Y   KVGLLSRFQ+K+EKE HL MIKHG L+IIVGTHSLLG RVVYN
Sbjct: 345 KQHFDVVSERFSMYPDIKVGLLSRFQSKAEKEEHLDMIKHGHLNIIVGTHSLLGSRVVYN 404

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 405 NLGLLVVDEEQ 415


>ref|XP_004231740.1| PREDICTED: transcription-repair-coupling factor-like [Solanum
           lycopersicum]
          Length = 826

 Score =  228 bits (580), Expect = 8e-58
 Identities = 116/131 (88%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA  DVERDLTE ENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 276 DQKQAFSDVERDLTESENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 335

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFSRY + +VGLLSRFQTKSEKE +L MIK G +DIIVGTHSLLG+RV YN
Sbjct: 336 KQHFDVISERFSRYPNIRVGLLSRFQTKSEKEEYLSMIKDGHVDIIVGTHSLLGNRVEYN 395

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 396 NLGLLVVDEEQ 406


>ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592949 [Solanum tuberosum]
          Length = 825

 Score =  227 bits (579), Expect = 1e-57
 Identities = 116/131 (88%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA  DVERDLTE ENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 275 DQKQAFSDVERDLTESENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 334

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFSRY + +VGLLSRFQTKSEKE +L MIK G +DIIVGTHSLLG+RV YN
Sbjct: 335 KQHFDVISERFSRYPNIRVGLLSRFQTKSEKEEYLSMIKDGRVDIIVGTHSLLGNRVEYN 394

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 395 NLGLLVVDEEQ 405


>ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
           gi|567204573|ref|XP_006408577.1| hypothetical protein
           EUTSA_v10020076mg [Eutrema salsugineum]
           gi|557109722|gb|ESQ50029.1| hypothetical protein
           EUTSA_v10020076mg [Eutrema salsugineum]
           gi|557109723|gb|ESQ50030.1| hypothetical protein
           EUTSA_v10020076mg [Eutrema salsugineum]
          Length = 823

 Score =  226 bits (575), Expect = 3e-57
 Identities = 113/131 (86%), Positives = 123/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DV++DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 273 DQKQAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQH+DVISERFS Y   KVGLLSRFQTK+EKE +L+MIK+GDL+IIVGTHSLLG RVVY+
Sbjct: 333 KQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYS 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
           gi|557109721|gb|ESQ50028.1| hypothetical protein
           EUTSA_v10020076mg [Eutrema salsugineum]
          Length = 801

 Score =  226 bits (575), Expect = 3e-57
 Identities = 113/131 (86%), Positives = 123/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DV++DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 273 DQKQAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQH+DVISERFS Y   KVGLLSRFQTK+EKE +L+MIK+GDL+IIVGTHSLLG RVVY+
Sbjct: 333 KQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYS 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus persica]
          Length = 804

 Score =  226 bits (575), Expect = 3e-57
 Identities = 114/131 (87%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DV +DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 254 DQKQAFIDVHKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 313

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVIS+RFS Y + KVGLLSRFQT++EKE HL MIK+G LDIIVGTHSLLG RVVYN
Sbjct: 314 KQHFDVISDRFSVYPNIKVGLLSRFQTRAEKEEHLDMIKNGRLDIIVGTHSLLGSRVVYN 373

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 374 NLGLLVVDEEQ 384


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score =  226 bits (575), Expect = 3e-57
 Identities = 113/131 (86%), Positives = 123/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DV++DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 273 DQKQAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQH+DVISERFS Y   KVGLLSRFQTK+EKE +L+MIK+GDL+IIVGTHSLLG RVVY+
Sbjct: 333 KQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYS 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>gb|ESW33797.1| hypothetical protein PHAVU_001G099500g [Phaseolus vulgaris]
          Length = 530

 Score =  224 bits (571), Expect = 9e-57
 Identities = 114/131 (87%), Positives = 120/131 (91%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVERDLTE+E PMDRLICGDVGFGKTEVA+RAIFCVVSA KQAMVLAPTIVLA
Sbjct: 272 DQKQAFIDVERDLTEQETPMDRLICGDVGFGKTEVAIRAIFCVVSAKKQAMVLAPTIVLA 331

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS Y   KVGLLSRFQTK+EKE +L MIK+G LDIIVGTHSLLGDRV YN
Sbjct: 332 KQHFDVISERFSVYPDIKVGLLSRFQTKAEKEENLDMIKNGSLDIIVGTHSLLGDRVTYN 391

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 392 NLGLLVVDEEQ 402


>gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial
           [Medicago truncatula]
          Length = 494

 Score =  224 bits (571), Expect = 9e-57
 Identities = 113/131 (86%), Positives = 122/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVA+RAI CVV+A KQAMVLAPTIVLA
Sbjct: 106 DQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVLA 165

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS Y   KVGLLSRFQT+SEKE +L+MIK+GDLDIIVGTHSLLG+RVVYN
Sbjct: 166 KQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYN 225

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 226 NLGLLVVDEEQ 236


>ref|XP_003624531.1| Transcription-repair-coupling factor [Medicago truncatula]
           gi|355499546|gb|AES80749.1|
           Transcription-repair-coupling factor [Medicago
           truncatula]
          Length = 503

 Score =  224 bits (571), Expect = 9e-57
 Identities = 113/131 (86%), Positives = 122/131 (93%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVA+RAI CVV+A KQAMVLAPTIVLA
Sbjct: 90  DQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVLA 149

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS Y   KVGLLSRFQT+SEKE +L+MIK+GDLDIIVGTHSLLG+RVVYN
Sbjct: 150 KQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYN 209

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 210 NLGLLVVDEEQ 220


>ref|XP_004493106.1| PREDICTED: transcription-repair-coupling factor-like [Cicer
           arietinum]
          Length = 823

 Score =  224 bits (570), Expect = 1e-56
 Identities = 115/131 (87%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVALRAI CVVSA KQAMVLAPTIVLA
Sbjct: 273 DQKQAFVDVEKDLTERETPMDRLICGDVGFGKTEVALRAIQCVVSAKKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS Y   KVGLLSRFQT+SEKE +L+MIK GDLDIIVGTHSLLG+RVVYN
Sbjct: 333 KQHFDVISERFSVYPDIKVGLLSRFQTRSEKEGYLEMIKSGDLDIIVGTHSLLGNRVVYN 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Capsella rubella]
           gi|482568952|gb|EOA33141.1| hypothetical protein
           CARUB_v10016483mg [Capsella rubella]
          Length = 828

 Score =  224 bits (570), Expect = 1e-56
 Identities = 113/131 (86%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 278 DQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 337

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQH+DVISERFS Y   KVGLLSRFQTK+EKE +L+MIK G L+IIVGTHSLLG RVVY+
Sbjct: 338 KQHYDVISERFSLYSQIKVGLLSRFQTKAEKEEYLEMIKSGHLNIIVGTHSLLGSRVVYS 397

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 398 NLGLLVVDEEQ 408


>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
           lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
           ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
          Length = 823

 Score =  223 bits (569), Expect = 2e-56
 Identities = 113/131 (86%), Positives = 121/131 (92%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 273 DQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 332

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQH+DVISERFS Y   KVGLLSRFQTK+EKE +L+MIK G L+IIVGTHSLLG RVVY+
Sbjct: 333 KQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKDGHLNIIVGTHSLLGSRVVYS 392

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 393 NLGLLVVDEEQ 403


>ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
           gi|222861200|gb|EEE98742.1| DEAD/DEAH box helicase
           family protein [Populus trichocarpa]
          Length = 817

 Score =  222 bits (566), Expect = 3e-56
 Identities = 111/131 (84%), Positives = 120/131 (91%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQK A +DVERDL +RE PMDRLICGDVGFGKTEVALRAIFC+VSAGKQAMVLAPTIVLA
Sbjct: 267 DQKLAFIDVERDLNQRETPMDRLICGDVGFGKTEVALRAIFCIVSAGKQAMVLAPTIVLA 326

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVISERFS+Y   KV LLSRFQ+K+EKE +L MI+HG LDIIVGTHSLLG+RVVYN
Sbjct: 327 KQHFDVISERFSKYSHIKVALLSRFQSKAEKEMYLNMIEHGHLDIIVGTHSLLGNRVVYN 386

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 387 NLGLLVVDEEQ 397


>gb|EXB41421.1| Transcription-repair-coupling factor [Morus notabilis]
          Length = 816

 Score =  222 bits (565), Expect = 4e-56
 Identities = 111/131 (84%), Positives = 120/131 (91%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DVE+DLTER  PMDRLICGDVGFGKTEVALRAIFCVVSA KQAMVLAPTIVLA
Sbjct: 294 DQKQAFIDVEKDLTERHTPMDRLICGDVGFGKTEVALRAIFCVVSAAKQAMVLAPTIVLA 353

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHFDVIS+RFS Y + +VGLL+RFQT++EKE HL MIK+G LDIIVGTHSLLG RVVYN
Sbjct: 354 KQHFDVISQRFSMYPNIEVGLLTRFQTRAEKEEHLDMIKNGHLDIIVGTHSLLGSRVVYN 413

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 414 NLGLLVVDEEQ 424


>ref|XP_004306326.1| PREDICTED: transcription-repair-coupling factor-like [Fragaria
           vesca subsp. vesca]
          Length = 800

 Score =  222 bits (565), Expect = 4e-56
 Identities = 112/131 (85%), Positives = 120/131 (91%)
 Frame = +2

Query: 11  DQKQAIMDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 190
           DQKQA +DV++DLT RE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA
Sbjct: 250 DQKQAFIDVDKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLA 309

Query: 191 KQHFDVISERFSRYQSFKVGLLSRFQTKSEKETHLQMIKHGDLDIIVGTHSLLGDRVVYN 370
           KQHF+VIS+RFS Y +  VGLLSRFQTKSEK+ HL MIK+G LDIIVGTHSLLG RVVYN
Sbjct: 310 KQHFEVISQRFSIYPNINVGLLSRFQTKSEKDEHLDMIKNGHLDIIVGTHSLLGSRVVYN 369

Query: 371 NLGLLVVDEEQ 403
           NLGLLVVDEEQ
Sbjct: 370 NLGLLVVDEEQ 380