BLASTX nr result
ID: Rehmannia23_contig00003968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00003968 (887 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia... 74 9e-11 gb|ABK28206.1| unknown [Arabidopsis thaliana] 67 1e-08 ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik... 67 1e-08 gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 64 1e-07 gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 63 2e-07 gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 62 2e-07 gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [... 61 6e-07 ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 60 8e-07 ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844... 59 3e-06 ref|XP_003595859.1| Manganese transport protein mntH [Medicago t... 58 5e-06 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 58 5e-06 gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [... 57 7e-06 pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 57 7e-06 gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 57 7e-06 gb|ABA94478.1| retrotransposon protein, putative, unclassified [... 57 9e-06 gb|EEE57924.1| hypothetical protein OsJ_08622 [Oryza sativa Japo... 57 9e-06 gb|EEE52328.1| hypothetical protein OsJ_34356 [Oryza sativa Japo... 57 9e-06 >ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana] gi|9294184|dbj|BAB02086.1| reverse transcriptase-like protein [Arabidopsis thaliana] gi|332643482|gb|AEE77003.1| ribonuclease H-like protein [Arabidopsis thaliana] Length = 343 Score = 73.6 bits (179), Expect = 9e-11 Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 5/170 (2%) Frame = +2 Query: 23 PICGLCSDEDESTQHLFFRCRRAQIIWKLSPV-HWNNSNTFSDFSSWWHYIIQVDKKFLG 199 P C C EDE++QHLFF C AQ +W+ S + H T + ++ Sbjct: 54 PQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQ 113 Query: 200 EDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVD---NAIQEWLEFNKSLSPPDRKTMA 370 L I+ILW LWKSRN +F QK+++ + T+ N +QEW + N + +++ + Sbjct: 114 PQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHS 173 Query: 371 PKVCCPPMLRSPPMEDQVECISL-YTSVCSHRDSNPRFGVLALNTEGSFM 517 + P M R+ I Y +H+ N + G L + G +M Sbjct: 174 SRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYM 223 >gb|ABK28206.1| unknown [Arabidopsis thaliana] Length = 293 Score = 66.6 bits (161), Expect = 1e-08 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 13/247 (5%) Frame = +2 Query: 29 CGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSD---FSSWWHYIIQVDKKFLG 199 C C D E+ HL F+C A+++W +SP+ ++D + +W ++V+ LG Sbjct: 12 CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLG 71 Query: 200 EDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNKSLSPPDRKTMAPKV 379 + L ++LW LWKSRN +F K E + A++++ E++ R+ + K Sbjct: 72 KIG-NLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWS------TRRELEGKA 124 Query: 380 CCPPMLRS------PPMEDQVECISLYTSVCSHRDSNPRFGV--LALNTEGS--FMHAWA 529 P + R+ P V+C + + + NPR G+ + N G +M A A Sbjct: 125 SGPQVERNLSVQWKAPPYQWVKC----NTDATWQLENPRCGIGWILRNESGGVLWMGARA 180 Query: 530 ISREADVQPVEIYLHAICFLLTMAAKFKWSRISXXXXXXXXARKLKSKLSLPPEQATIAE 709 + R +V +E L A+ + + ++F + RI L S P Q + E Sbjct: 181 LPRTKNV--LEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQPAL-E 237 Query: 710 DINLLTH 730 DI L H Sbjct: 238 DIQQLLH 244 >ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] gi|91805481|gb|ABE65469.1| hypothetical protein At2g34320 [Arabidopsis thaliana] gi|330253864|gb|AEC08958.1| polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana] Length = 292 Score = 66.6 bits (161), Expect = 1e-08 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 13/247 (5%) Frame = +2 Query: 29 CGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSD---FSSWWHYIIQVDKKFLG 199 C C D E+ HL F+C A+++W +SP+ ++D + +W ++V+ LG Sbjct: 12 CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLG 71 Query: 200 EDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNKSLSPPDRKTMAPKV 379 + L ++LW LWKSRN +F K E + A++++ E++ R+ + K Sbjct: 72 KIG-NLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWS------TRRELEGKA 124 Query: 380 CCPPMLRS------PPMEDQVECISLYTSVCSHRDSNPRFGV--LALNTEGS--FMHAWA 529 P + R+ P V+C + + + NPR G+ + N G +M A A Sbjct: 125 SGPQVERNLSVQWKAPPYQWVKC----NTDATWQLENPRCGIGWILRNESGGVLWMGARA 180 Query: 530 ISREADVQPVEIYLHAICFLLTMAAKFKWSRISXXXXXXXXARKLKSKLSLPPEQATIAE 709 + R +V +E L A+ + + ++F + RI L S P Q + E Sbjct: 181 LPRTKNV--LEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQPAL-E 237 Query: 710 DINLLTH 730 DI L H Sbjct: 238 DIQQLLH 244 >gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1374 Score = 63.5 bits (153), Expect = 1e-07 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 3/237 (1%) Frame = +2 Query: 29 CGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSD--FSSWWHYIIQVDKKFLGE 202 C C E+ HL F+C A++ W +SP+ +++ F + H+++ V K E Sbjct: 1092 CVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFRNM-HHVLSVHKSQPEE 1150 Query: 203 -DRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNKSLSPPDRKTMAPKV 379 D L +ILW LWK+RN +F + T + + A ++ +N P + T + + Sbjct: 1151 SDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRD 1210 Query: 380 CCPPMLRSPPMEDQVECISLYTSVCSHRDSNPRFGVLALNTEGSFMHAWAISREADVQPV 559 C + PP V+C + S N G + N G + + + + Sbjct: 1211 RC--VKWQPPSHGWVKCNT--DGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVL 1266 Query: 560 EIYLHAICFLLTMAAKFKWSRISXXXXXXXXARKLKSKLSLPPEQATIAEDINLLTH 730 E + A+ + + ++F + R+ +++++ +P I + NLL H Sbjct: 1267 ETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPRIQDIRNLLRH 1323 >gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1225 Score = 62.8 bits (151), Expect = 2e-07 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 6/109 (5%) Frame = +2 Query: 26 ICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSDFSSWWHY--IIQVDKKF-L 196 +C C E+ES HL F C ++ IW LSP+ ++ F S ++++ ++ K+F + Sbjct: 963 VCPRCGAEEESINHLLFLCPPSRQIWALSPIP-SSEYIFPRNSLFYNFDFLLSRGKEFDI 1021 Query: 197 GEDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQE---WLEFN 334 ED +++ +ILW++WKSRN +IF + + +D AIQE W + N Sbjct: 1022 AEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQAN 1070 >gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 62.4 bits (150), Expect = 2e-07 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%) Frame = +2 Query: 29 CGLCSDEDESTQHLFFRCRRAQIIWKLSPVH--WNNSNTFSDFSSWWHYIIQVDKKFLGE 202 C C E ES QH+ F C + +W +S +H S +++ +H++I D Sbjct: 932 CQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFECGSVYANLYHFLINRDNLKWPV 991 Query: 203 DRIQLTIYILWWLWKSRNVWIFNQKNMTEKET---VDNAIQEWL-------EFNKSLSPP 352 + + +I+W +WK+RN++ F K T ET V +++W E + Sbjct: 992 ELRRSFPWIIWRIWKNRNLFFFEGKRFTVLETILKVRKDVEDWFAAQVVEKERRAEVGQS 1051 Query: 353 DRKTMAPKVCCPPMLRSPPMEDQVEC 430 D++ +P+ P + PP D V+C Sbjct: 1052 DQQVFSPRNVSPVVRWLPPPTDWVKC 1077 >gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [Prunus persica] Length = 534 Score = 60.8 bits (146), Expect = 6e-07 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%) Frame = +2 Query: 23 PICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWN-NSNTFSDFSSWWHYIIQVDKKFLG 199 P+C +C + ES +HLF C Q++W P+++ N + + S W ++++ + LG Sbjct: 323 PLCPICGEFPESVEHLFLLCNWVQLVWFGGPLNYKINRQSITSMSEWMMQVLKISQS-LG 381 Query: 200 EDR---IQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNKSLSPP 352 DR I +Y W +WKSR +F+ ++ T+ A +FN PP Sbjct: 382 YDRKWLISQIVYTCWSIWKSRCSAVFDDISVCPHRTLLVAKNLINDFNLVRCPP 435 >ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana] gi|3184275|gb|AAC18922.1| putative reverse transcriptase [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase H domain-containing protein [Arabidopsis thaliana] Length = 365 Score = 60.5 bits (145), Expect = 8e-07 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 9/115 (7%) Frame = +2 Query: 23 PICGLCSDEDESTQHLFFRCRRAQIIWKLSPV----HWNNSNTFSDFSSWWHYIIQVDKK 190 PIC C E+E+ H+ F C Q +W+ + + W ++F D + +IQ+ K Sbjct: 73 PICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLN---RLIQLSKT 129 Query: 191 FLGE--DRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQ---EWLEFNKS 340 DR L +I+W LWKSRNV++F QK + IQ EWL N++ Sbjct: 130 QTTNSLDRF-LPFWIMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANET 183 >ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium distachyon] Length = 2492 Score = 58.5 bits (140), Expect = 3e-06 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Frame = +2 Query: 26 ICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSDFS----SWWHYIIQVDKKF 193 +C LC E HL C A+ +W S V W + S +WW II K Sbjct: 2025 LCLLCDQVQEGAAHLMIHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSA 2084 Query: 194 LGEDRIQLTIYILWWLWKSRNVWIFNQKNM 283 + I + I W LWK RN +F QK M Sbjct: 2085 SKDKEIAMAALIAWHLWKERNSRVFQQKEM 2114 >ref|XP_003595859.1| Manganese transport protein mntH [Medicago truncatula] gi|355484907|gb|AES66110.1| Manganese transport protein mntH [Medicago truncatula] Length = 663 Score = 57.8 bits (138), Expect = 5e-06 Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Frame = +2 Query: 23 PICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFSD---FSSW--WHYIIQVDK 187 P+CGLC+ +ES HLF C A +W L + W N + S F W WH +V K Sbjct: 256 PLCGLCTRMEESVLHLFLHCEVASAVW-LKLMRWLNHSFISPPNLFVHWECWHGGERVKK 314 Query: 188 KFLGEDRIQLTIYILWWLWKSRNVWIFNQKN 280 G+ I L +W LWK+RN +FN N Sbjct: 315 VKKGKGIIWLA--TIWALWKTRNDKVFNDAN 343 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 57.8 bits (138), Expect = 5e-06 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Frame = +2 Query: 2 KNCISILPICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWNNSNTFS-DFSSWWHYIIQ 178 K ++I C C +++E+T+HL + C + W +SP+ + N + F W ++ Sbjct: 1083 KRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLD 1142 Query: 179 VDKKFLGEDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNK 337 K + L I W +W RN W+F +K + +E V+ A++ +EF + Sbjct: 1143 THKD---TEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEE 1192 >gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica] Length = 509 Score = 57.4 bits (137), Expect = 7e-06 Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 6/121 (4%) Frame = +2 Query: 2 KNCISILPICGLCSDEDESTQHLFFRCRRAQIIWKLSPVHWN-NSNTFSDFSSWWHYIIQ 178 K IS P+C +C + +ES +HLF C +W SP+++ ++ + + F +W + + Q Sbjct: 270 KRKISQSPMCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRVHNQSITTFDNWLNSMFQ 329 Query: 179 VD-KKFLGEDRIQLTI-YILWWLWKSRNVWIFNQKNMTEKETVDNAIQ---EWLEFNKSL 343 ++ L +R+ I +ILW +WK+R ++ + + + A++ E++E N S Sbjct: 330 LNLTSILDRNRLMTIISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEFIEANVSQ 389 Query: 344 S 346 S Sbjct: 390 S 390 >pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana] Length = 1333 Score = 57.4 bits (137), Expect = 7e-06 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%) Frame = +2 Query: 23 PICGLCSDEDESTQHLFFRCRRAQIIWKLSPV-----HWNNSNTFSDFSSWWHYIIQVDK 187 P C +C +E ES H+ F C A+ +W LS V + NS+ F++ Y++++ Sbjct: 1084 PRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANI----QYLLELKG 1139 Query: 188 KFLGEDRIQLT-IYILWWLWKSRNVWIFNQ---KNMTEKETVDNAIQEWLEFNKSLSPPD 355 K L ++I+ + ++LW LWK+R+ F + E + + +QEW ++ D Sbjct: 1140 KGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEKIRDDVQEWFLAQALVASVD 1199 Query: 356 RKTMAPKVCCPPMLRSPPM 412 CP PP+ Sbjct: 1200 AGETVCSAPCPSSWEPPPL 1218 >gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1138 Score = 57.4 bits (137), Expect = 7e-06 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 8/148 (5%) Frame = +2 Query: 11 ISILPICGLCSDEDESTQHLFFRCRRAQIIWKLSPV-----HWNNSNTFSDFSSWWHYII 175 +SI P C +C DE EST H+ F C A+ +W LS V + N++ F++ ++ Sbjct: 854 MSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGVPTPEFGFQNASIFANI----QFLF 909 Query: 176 QVDKKFLGEDRIQLT-IYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEWLEFNKSLSPP 352 ++ K L D ++ + ++LW LWK+RN F+ ++ ++ LE+ ++ S Sbjct: 910 ELKKMILVPDLVKRSWPWVLWRLWKNRNKLFFDGITFCPLNSIVKIQEDTLEWFQAQSQI 969 Query: 353 DRKTMAPKVCCPPMLRS--PPMEDQVEC 430 P S PP E V+C Sbjct: 970 RVSESEEGQRVIPFTHSWEPPPEGWVKC 997 >gb|ABA94478.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1193 Score = 57.0 bits (136), Expect = 9e-06 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Frame = +2 Query: 17 ILPICGLCSDEDESTQHLFFRCRRAQIIW--KLSPVHWNNSNTFSDFSSWW----HYIIQ 178 + PIC LCS + ES QH+F C +Q +W + + + S SDF+ WW + + Sbjct: 892 LAPICHLCSKDGESYQHIFQACTFSQQVWVQVQARLSLSCSPPSSDFAGWWLAARQTVAK 951 Query: 179 VDKKFLGEDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVD 304 +D+K I + W +WK RN +F N+ ++ Sbjct: 952 IDRKTFDAG----VILVTWLIWKERNARVFEGNNLVGHAAIE 989 >gb|EEE57924.1| hypothetical protein OsJ_08622 [Oryza sativa Japonica Group] Length = 390 Score = 57.0 bits (136), Expect = 9e-06 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%) Frame = +2 Query: 17 ILPICGLCSDEDESTQHLFFRCRRAQIIW--KLSPVHWNNSNTFSDFSSWW----HYIIQ 178 + PIC LCS + ES QH+F C +Q +W + + + S SDF+ WW + + Sbjct: 261 LAPICHLCSKDGESCQHIFQACTFSQQVWVKVQARLSLSCSPPSSDFAGWWLAARQTVAK 320 Query: 179 VDKKFLGEDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVDNAIQEW 322 +D+K I + W +WK RN +F + + +EW Sbjct: 321 IDRKTFDAG----VILVTWLIWKERNARVFEGTASSVTQLCATMCEEW 364 >gb|EEE52328.1| hypothetical protein OsJ_34356 [Oryza sativa Japonica Group] Length = 783 Score = 57.0 bits (136), Expect = 9e-06 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Frame = +2 Query: 17 ILPICGLCSDEDESTQHLFFRCRRAQIIW--KLSPVHWNNSNTFSDFSSWW----HYIIQ 178 + PIC LCS + ES QH+F C +Q +W + + + S SDF+ WW + + Sbjct: 473 LAPICHLCSKDGESYQHIFQACTFSQQVWVQVQARLSLSCSPPSSDFAGWWLAARQTVAK 532 Query: 179 VDKKFLGEDRIQLTIYILWWLWKSRNVWIFNQKNMTEKETVD 304 +D+K I + W +WK RN +F N+ ++ Sbjct: 533 IDRKTFDAG----VILVTWLIWKERNARVFEGNNLVGHAAIE 570