BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00003830
         (3253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1395   0.0  
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1389   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1381   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1358   0.0  
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise...  1346   0.0  
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe...  1343   0.0  
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]      1317   0.0  
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1296   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1294   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...  1293   0.0  
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1290   0.0  
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro...  1283   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...  1273   0.0  
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1270   0.0  
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc...  1261   0.0  
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus...  1260   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]             1260   0.0  
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1259   0.0  
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]             1255   0.0  
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part...  1215   0.0  

>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score = 1395 bits (3610), Expect = 0.0
 Identities = 678/1033 (65%), Positives = 835/1033 (80%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            R T TV+VSNIPQSAIA++L  F +S +GKG+VFA +IF+E KNWKSRGHGRVQF+    
Sbjct: 6    RATATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQFETLQD 65

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
            K+  LSLS Q  LLF+G  LS+  SF+DII RP+EPK R ++G   +L  G++V+ D M 
Sbjct: 66   KLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDG---ILHTGLLVKNDVMQ 122

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLT 693
            +LE+W+ VK  +MPE+K LEF+V+H  ECY+LEVQFGDV+E   C L+       A+LL 
Sbjct: 123  VLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSLENQKS---ALLLK 179

Query: 694  LRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEE 873
            L+HAPK+++++SGP VASKF+ DRYHI KED ++LWVRTTDFSN+KSIG  SSLCWE E+
Sbjct: 180  LKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETED 239

Query: 874  GSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVH 1053
            G  + D+ + LP  +KDV++L L++       S+ VP+V   SD ++PYE+LFQLNSLV 
Sbjct: 240  GWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQ 299

Query: 1054 TQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENL 1233
            TQK+SL +V+  L E+LS L++DTA++ILQKMHKL STC+EP +FI+    +   N +N 
Sbjct: 300  TQKISLGAVNPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNNKNQ 359

Query: 1234 TSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDW 1413
             S++   L + + MS HRVLVTPSK +C+GPELE+SNYIVKNFA +ASDFLRVTFV+EDW
Sbjct: 360  LSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDW 419

Query: 1414 GRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVW 1593
            G++   AVSMS++Q IFAKPYRT IY RILS+LR+GIVIG K+F FLAFSASQLRSNSVW
Sbjct: 420  GKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVW 479

Query: 1594 MFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVV 1773
            MFASN+++KAEDIREWMGCFNKIRSISKCAARMGQLFS+S+QT+EV  + ++ +PDIEV 
Sbjct: 480  MFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVT 539

Query: 1774 SDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            SDGV YCFSDGIGKIS AFA+ + +K GL H PSAFQIRYGGYKGVI VDR SFRKL+LR
Sbjct: 540  SDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLR 599

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTLGVED     + D  L+ LG++LT
Sbjct: 600  GSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLT 659

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++VLES GGG++K++L+RMLLQGY P  EPYLS +LQSH ENQ++DLRSR RIF+
Sbjct: 660  TNEAALDVLESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFI 719

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGR+LVGCLDETGIL+YG+VYVR+TM KAE+Q  G Q FF++VDE T+          N
Sbjct: 720  PKGRILVGCLDETGILKYGEVYVRITMTKAELQ-NGQQNFFQKVDETTAVVRGKVVVTKN 778

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGDVRVLEAV++V L+E   VDC++FPQ G+RPHPNECSGGDLDGDLYFI WD++L
Sbjct: 779  PCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESL 838

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +TVTPMDYTGRRPRIMDH+VTLEEIQ+FF DYMISDTLG ISTAHL+HADREPDKAL
Sbjct: 839  IPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKAL 898

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            +SKCL+LA LHSMAVDFAKTGA AEMPR LKPREFPDFMERW+KPMY+S G LGKLYR  
Sbjct: 899  NSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGV 958

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            ++   +  ++   +D    DAYD DL+V+GY++F++TA+THKE YLD M +LLNYYGAE 
Sbjct: 959  IKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEK 1018

Query: 3214 EVEILTGNLQKKS 3252
            EVEILTGNL++KS
Sbjct: 1019 EVEILTGNLRQKS 1031


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1389 bits (3595), Expect = 0.0
 Identities = 681/1036 (65%), Positives = 841/1036 (81%), Gaps = 3/1036 (0%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            R T TV+VSNIPQ+AIA++L  F ES++GKG+VFA +IF+E KNWKSRGHGRVQF+ + +
Sbjct: 6    RVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQS 65

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
            K+++LSLS Q KL+F+G  L ++ SF+DII RP+E   R + G   +L  GI++  D M 
Sbjct: 66   KLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---ILHTGILLENDYME 122

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNH-EGECYKLEVQFGDVLETRGCCLDGDDKKVDAILL 690
            +LE+W+ VK  +MPE+K LEF+V+H +GECY+LEVQFGD++ET  C L+  D+K  A+LL
Sbjct: 123  VLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLE--DEKT-ALLL 179

Query: 691  TLRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIE 870
             L+HAPK+++++SGP VASKF++DRYH+ +ED ++LWVRTTDFS +KSIG  SS CWEIE
Sbjct: 180  KLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIE 239

Query: 871  EGSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLV 1050
            +G  + D+ + LPY + DVM+LVL+E      AS+LVP+ +  SD ++PYE+LFQLNSL+
Sbjct: 240  DGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLI 299

Query: 1051 HTQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGEN 1230
            HT K+SL +V T L E+LS L++DTA++ILQKMHKL STC+EP  FI+    +   N +N
Sbjct: 300  HTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKN 359

Query: 1231 LTSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDED 1410
              S++   L +QN MS HRVLVTPSK +C+GPELE+SNYIVKNFA +ASDFLRVTFV+ED
Sbjct: 360  QPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEED 419

Query: 1411 WGRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSV 1590
            WG++S  A+SMS++Q IFAKPYRT IY RILS+LRDG+VIG K+F FLAFSASQLRSNSV
Sbjct: 420  WGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSV 479

Query: 1591 WMFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEV 1770
            WMFASN+H+KAEDIREWMGCFNKIRS+SKCAARMGQLFS+S QT+EV    ++ +PDIEV
Sbjct: 480  WMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEV 539

Query: 1771 VSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLAL 1950
             SDGV YCFSDGIGKIS AFA  + +K GL + PSAFQIRYGGYKGVI VDR SFRKL+L
Sbjct: 540  TSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSL 599

Query: 1951 RSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRIL 2130
            R SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTLGVED VF  + D  L  LG++L
Sbjct: 600  RGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKML 659

Query: 2131 TKTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIF 2310
            T  EAA++VLES GGG++K++L+RML QGY P  EPYLS +LQSH ENQL+DLRSR RIF
Sbjct: 660  TTNEAALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIF 719

Query: 2311 VPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXX 2490
            + KGRVLVGCLDETGIL YGQVY R+TM KAE+Q    Q FF++VDE T+          
Sbjct: 720  IHKGRVLVGCLDETGILNYGQVYARITMTKAELQ-SAQQSFFQKVDETTAVVRGNVVVTK 778

Query: 2491 NPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDN 2670
            NPCLHPGDVRVLEAV++V L+E   VDC++FPQKG+RPHPNECSGGDLDGDLYFISWD+N
Sbjct: 779  NPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDEN 838

Query: 2671 LIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKA 2850
            LIP +TVTPMDYTGRR RIMDH+VTL+EIQ+FF DYMISDTLG ISTAHL+HADREPDKA
Sbjct: 839  LIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKA 898

Query: 2851 LSSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRA 3030
            L+ KCL+LA LHSMAVDFAKTGA AEMPR LKPREFPDF+ERW+KPMY+S G LGKLYRA
Sbjct: 899  LNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRA 958

Query: 3031 TVQFIHQMKTNADLSDAIPS--DAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYG 3204
             V     +++N+D   ++ +  DAYD  L+ DGY++F++TA+ HKE YLD M +LLNYYG
Sbjct: 959  IVN--SSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYG 1016

Query: 3205 AESEVEILTGNLQKKS 3252
            AE EVEILTGNL++KS
Sbjct: 1017 AEKEVEILTGNLRQKS 1032


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
          Length = 1119

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 674/1033 (65%), Positives = 830/1033 (80%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            R T TV+VSNIPQSAIA++L  F +S +GKG+VFA +I +E KNWKSRGHGRVQF+    
Sbjct: 6    RATATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQFETLQD 65

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
            K+  LSL+ Q  LLF+G  LS+  SF+DII RP+EPK R + G   +L  G++V  D M 
Sbjct: 66   KLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAG---ILHTGLLVEKDVMQ 122

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLT 693
            +LE+W+ VK  +MPE+K LEF+V+H  ECY+LEVQFGDV E   C ++       A+LL 
Sbjct: 123  VLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSVENQKS---ALLLK 179

Query: 694  LRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEE 873
            L+HAPK+++++SGP VASKF+ DRYHI KED ++LW+RTTDFSN+KSIG  SSLCWE E+
Sbjct: 180  LKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWETED 239

Query: 874  GSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVH 1053
            G  + D+++ LP  ++DV++L L++       S+ VP+V   SD ++PYE+LFQLNSLV 
Sbjct: 240  GWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQ 299

Query: 1054 TQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENL 1233
            TQK+SL +++  L E+LS L++DTA++ILQKMHKL S C++P  FI+    +   N +N 
Sbjct: 300  TQKISLGAINPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGKNNKNR 359

Query: 1234 TSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDW 1413
             S++   L + + MS HRVLVTPSK +C+GPELE+SNYIVKNFAS+ASDFLRVTFV+EDW
Sbjct: 360  PSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVEEDW 419

Query: 1414 GRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVW 1593
            G++   AVSMS++Q IFAKPYRT IY RILS+LR+GIVIG K+F FLAFSASQLRSNSVW
Sbjct: 420  GKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVW 479

Query: 1594 MFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVV 1773
            MFASN+++KAEDIREWMGCFNKIRSISKCAARMGQLFS+S+QT+EV  + ++ +PDIEV 
Sbjct: 480  MFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVT 539

Query: 1774 SDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            SDGV YCFSDGIGKIS AFA+ + +K GL H PSAFQIRYGGYKGVI VDR SFRKL+LR
Sbjct: 540  SDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLR 599

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTLGVED  F  + D  L  LG++LT
Sbjct: 600  GSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGKMLT 659

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++VLES GGGE+K++L+RMLLQGY P  EPYLS +LQSH ENQ++DLRSR RIF+
Sbjct: 660  TNEAALDVLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFI 719

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGR+LVGCLDETGIL+YGQVYVR+TM KAE+Q  G Q FF++VDE T+          N
Sbjct: 720  PKGRILVGCLDETGILKYGQVYVRITMTKAELQ-NGQQNFFQKVDETTAVVRGKVVVTKN 778

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGDVRVLEAV++V L+E   VDC++FPQKG+RPHPNECSGGDLDGDLYFI WD++L
Sbjct: 779  PCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESL 838

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +TVTPMDYTGRRPRIMDH+VTLEEIQ+FF DYMISDTLG ISTAHL+HADREPDKAL
Sbjct: 839  IPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKAL 898

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            +SKCL+LA LHSMAVDFAKTGA AEMPR LKPREFPDFMERW+KPMY+S G LGKLYR  
Sbjct: 899  NSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGV 958

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            ++   +  ++   +D    DAYD DL+V+GY++F +TA+THK  YLD M +LLNYYGAE 
Sbjct: 959  MKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEK 1018

Query: 3214 EVEILTGNLQKKS 3252
            EVEILTGNL++KS
Sbjct: 1019 EVEILTGNLRQKS 1031


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1358 bits (3515), Expect = 0.0
 Identities = 673/1028 (65%), Positives = 829/1028 (80%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TVKVSNIP++AIA+EL +FLES LG  T++A+EI TE KNWKSRG GRVQF+   AK  A
Sbjct: 8    TVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFETLQAKRAA 67

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
              LS Q  L+FRG  LSIS +F+DII RP+EP+N+V++G   VL  G +V  DCM +LES
Sbjct: 68   DLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSG---VLHVGFLVEDDCMLVLES 124

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GVK  VMPE+ ++EF+V+ +GE YKLEV F DVLE+  CCL G   KV+A+LL L++A
Sbjct: 125  WEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGG--KVNALLLKLKYA 182

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            PKIF+K +GPN+ASKF+ DRYHISKED ++LW+RTTDFS++KS+G  +S CWEI+EG   
Sbjct: 183  PKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPA 242

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
            LDI+   PYY KD+ EL LE+G  F   S LVP+V   S  ++ YE+LFQLNSLVH QK+
Sbjct: 243  LDIFASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKI 301

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SLA+VDT L EILS+L +DTAI+ILQK+HK  ST Y+P SFI+    I + N +NL  ++
Sbjct: 302  SLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSS 361

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
               LT+ N MSCHRVLVTPSK +C+GPELESSNY+VK++A+YASDF+RV+FV+EDW ++ 
Sbjct: 362  HSRLTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLP 421

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
            + A+SMSI++  FA P+RT+IY RILS+LR+GIVIG K+F+FLAFSASQLRSNSVWMFAS
Sbjct: 422  SNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFAS 481

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND ++ +DIREWMGCF KIRS+SKCAARMGQLFSSS+QTL V  +D++ IPDIEV SDG 
Sbjct: 482  NDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGF 541

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +FAK + +K GL   PSAFQIRYGGYKGVI VDR SFRKL+LRSSML
Sbjct: 542  GYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSML 601

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+S N MLN+TKWSES PCYLNREI++LLSTLGVED  F A+ +EQ+  L ++LT  +A
Sbjct: 602  KFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQA 661

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A++VLES GG + K +L +MLLQGY+P  EPYLS +LQ++ E+QL+D+R+R RIFVPK R
Sbjct: 662  ALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKAR 721

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLH 2505
            VL+GCLDETGIL YGQVYVRVTM KAE +C  NQ FF++VD+ TS          NPCLH
Sbjct: 722  VLIGCLDETGILNYGQVYVRVTMTKAEHKC-RNQSFFQKVDDTTSVVIGKVIVTKNPCLH 780

Query: 2506 PGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPR 2685
            PGD+RVL+AV++V+L+E  LVDC++FPQKG+RPHPNECSGGDLDGD +FI WD+ LIP +
Sbjct: 781  PGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQ 840

Query: 2686 TVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKC 2865
            T  PMDYT RRPRIMDHDVTLEEIQKFF DYMI+DTLG ISTAHL+HADREP+KA S KC
Sbjct: 841  TEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKC 900

Query: 2866 LELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFI 3045
            LELA LHSMAVDFAKTGAPAEMPR LKP+EFPDFMER +KPMY+S+GALGKLYRAT+   
Sbjct: 901  LELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIASR 960

Query: 3046 HQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEI 3225
               K++   S  IP  AYD DL VDG+++FL+ A+ HKE Y ++M TL+N+YGAESE E+
Sbjct: 961  VNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEM 1020

Query: 3226 LTGNLQKK 3249
            LTGNL+ K
Sbjct: 1021 LTGNLRNK 1028


>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
          Length = 1094

 Score = 1346 bits (3484), Expect = 0.0
 Identities = 670/1013 (66%), Positives = 812/1013 (80%), Gaps = 8/1013 (0%)
 Frame = +1

Query: 238  GKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFND 417
            G G+VFAI+IFTE  NWKSRGHGRVQFD+   K +ALSLS +RKL+F+G YL +S SF D
Sbjct: 3    GNGSVFAIDIFTEHVNWKSRGHGRVQFDSPKFKAEALSLSEERKLVFKGHYLCVSHSFED 62

Query: 418  IIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGE 597
            II RP++P+NR+EN  GL LLAGIM++GDCMGILESW+G KLWV+PE+KKL  F+++E E
Sbjct: 63   IITRPVDPENRLENAAGLCLLAGIMLKGDCMGILESWNGCKLWVLPERKKLLLFLDNEEE 122

Query: 598  CYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHAPKIFKKISGPNVASKFTTDRYHIS 777
             YKLE+Q+GD+ ET  CC +GD  +++AILL L+HAPK+F+KISGP+V SKF +DRY+I 
Sbjct: 123  SYKLEIQYGDICETHLCCSNGDGDEINAILLKLKHAPKVFRKISGPDVTSKFASDRYNIC 182

Query: 778  KEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSNLDIYTCLPYYSKDVMELVLEEGVK 957
             +D D++WVRTTDFS  KSIGY S+LC  I +G ++  + T LPY SKD+++L L+E + 
Sbjct: 183  IQDMDFIWVRTTDFSEKKSIGYSSALCLNIPKGLNSPKLCTSLPYMSKDLIKLSLQE-MN 241

Query: 958  FNHASD-LVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLASV-DTGLFEILSSLDMDTAI 1131
             NH  D LVP+  NNS F I YEVLFQ++SLVHTQK+   S  D+ LF ILS LD+DTA+
Sbjct: 242  LNHLRDSLVPVFANNSGFEIAYEVLFQVHSLVHTQKIGFVSAFDSELFGILSRLDVDTAL 301

Query: 1132 LILQKMHKLHSTCYEPKSFIR-----NHTSITSHNGENLTSANSKSLTDQNTMSCHRVLV 1296
            L+L++MHKL STCY PK +I      +  S  S    +++S+    L DQN MSCHR+LV
Sbjct: 302  LVLKEMHKLPSTCYNPKEWITEVGLLSVESRRSKKNVSVSSSMKNGLKDQNVMSCHRILV 361

Query: 1297 TPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRISTTAVSMSIKQDIFAKPY 1476
            TP + +C+GPELE+SNY++KNFASY SDF+RVTFVDEDWGR+   ++S + KQ IFAKPY
Sbjct: 362  TPLRIYCLGPELEASNYVIKNFASYGSDFVRVTFVDEDWGRLPAASISTTTKQGIFAKPY 421

Query: 1477 RTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFASNDHIKAEDIREWMGCFN 1656
            +TDIY RILSVLRDGI IG+KKFEFLAFSASQLRSNSVWMFASND IK+ DIR+WMGCFN
Sbjct: 422  KTDIYYRILSVLRDGIAIGEKKFEFLAFSASQLRSNSVWMFASNDSIKSVDIRDWMGCFN 481

Query: 1657 KIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAK 1836
             IRSISKCAARMGQLFSSS QT+EV P + + IPD+E  SDGVKYCFSDGIGKIS +FA+
Sbjct: 482  SIRSISKCAARMGQLFSSSRQTIEVSPGETELIPDVECFSDGVKYCFSDGIGKISSSFAQ 541

Query: 1837 DIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSES 2016
            +I   LGL H+PSAFQIRYGGYKG++VV+R S  KLALRSSMLKF+SNN MLN+TKWSES
Sbjct: 542  EISSMLGLSHVPSAFQIRYGGYKGIVVVNRHSRYKLALRSSMLKFESNNRMLNVTKWSES 601

Query: 2017 QPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVL 2196
            QPCYLNREII LLSTLGV+D+  L MQ  QL+ LG +L  ++AA++VLES+G GE K +L
Sbjct: 602  QPCYLNREIIVLLSTLGVKDAALLEMQQRQLEFLGSVLVDSQAAMSVLESSGMGESKSIL 661

Query: 2197 IRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQV 2376
             RML  GY P  EPYL  +L+S+LENQ+ADLR+R R+FVPKGRVL+G LDE G LEYGQV
Sbjct: 662  PRMLSLGYKPTEEPYLHMMLRSYLENQIADLRTRCRVFVPKGRVLLGVLDEFGRLEYGQV 721

Query: 2377 YVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQE 2556
            YVRVTMNK+EV  G  Q +FR VD N+S          NPCLHPGDVRVLEAV D +L  
Sbjct: 722  YVRVTMNKSEV--GEKQPYFRSVDGNSSVVVGKVVITKNPCLHPGDVRVLEAVCDPELVS 779

Query: 2557 SNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDH 2736
             NLVDCLVFPQKG RPHPNECSGGDLDGDLYF+SWD +L+PPRTV PMDYTGRRPRIMDH
Sbjct: 780  ENLVDCLVFPQKGHRPHPNECSGGDLDGDLYFVSWDTDLVPPRTVDPMDYTGRRPRIMDH 839

Query: 2737 DVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTG 2916
            DVT++EIQ+FFADYM+SDTLG IS AHL+HADREP+KALSSKCLELA LHS AVD+AK+G
Sbjct: 840  DVTIQEIQRFFADYMVSDTLGAISNAHLVHADREPEKALSSKCLELAALHSTAVDYAKSG 899

Query: 2917 APAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDA 3096
            APA MPRAL PRE+PDFMER  KP Y S G LGKLYRA ++FI Q  +    ++ IPS  
Sbjct: 900  APAAMPRALLPREYPDFMERVGKPTYPSTGPLGKLYRAALRFIGQRNS----ANEIPSRG 955

Query: 3097 -YDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKS 3252
             +D DL+ DG+++FL+TA +H+E+Y + MG LL+YYGAE E EILTGN++ KS
Sbjct: 956  FFDGDLVADGHEAFLETALSHRERYSERMGQLLSYYGAEDEAEILTGNIESKS 1008


>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score = 1343 bits (3476), Expect = 0.0
 Identities = 654/1030 (63%), Positives = 824/1030 (80%), Gaps = 1/1030 (0%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV+VSNIPQ+  A+ELL+FL+S LG  +VFA+EI ++ KNWKSRG GRVQF   +AK +A
Sbjct: 8    TVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQFTTLEAKSEA 67

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
             SLS Q  L+F+   L +S +++DII RP++PK R+    G VL AG MV+GDCM +LES
Sbjct: 68   YSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLN---GTVLHAGFMVKGDCMSMLES 124

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GV+ WVMPE+K++EF+V    ECYKLE+ F +++E+ GC L G+  KV+A+LL L+  
Sbjct: 125  WEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGE--KVNALLLKLKFG 182

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            P+IF+KISGPNVA++F+TDRYH+ K+DFD+LWVRTTDFS++KSIGY +S CWEIEE  S 
Sbjct: 183  PRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSV 242

Query: 886  LDIYTCLPYYS-KDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQK 1062
             D++ C PYY   DV++L+L+ G K+   S+ VP+V   SD ++PYE+LFQLN+LVH+QK
Sbjct: 243  SDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQK 302

Query: 1063 MSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSA 1242
            +SLA+ D+ L E LS L +DT  ++L+K+HK  +TCY+P SF++    +   N ++  S 
Sbjct: 303  ISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRPSP 362

Query: 1243 NSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRI 1422
              K L + N MSCHRVL+TPSK  C+GPELE SNY+VKNFA+YASDF+RVTFVDEDW ++
Sbjct: 363  Y-KRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKL 421

Query: 1423 STTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFA 1602
               A+S SI+Q IFAKP+RT IY R+LS+LRDGIVIG+K+FEFLAFSASQLRS+SVWMF+
Sbjct: 422  PANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFS 481

Query: 1603 SNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDG 1782
            SND++KAEDIREWMGCF+KIRSISKCAARMGQLFSSS QTL V  +D++ IPD+E  SDG
Sbjct: 482  SNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDG 541

Query: 1783 VKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSM 1962
            V YCFSDGIGKIS +FA+ + +K GL   PSAFQIRYGGYKGVI VD +SFRKL+LRSSM
Sbjct: 542  VTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSM 601

Query: 1963 LKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTE 2142
            LKF+S N MLN+TKWS++ PCYLNREII+LLSTLGV+D  F A+Q+EQL+ LG++ T+  
Sbjct: 602  LKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERG 661

Query: 2143 AAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKG 2322
            AA+NV E   G + K  L++MLL GY+P  EPYLS +LQ++ EN L+DL+SR RIFVPKG
Sbjct: 662  AALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPKG 721

Query: 2323 RVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCL 2502
            RVLVGCLDETG L+YGQVYVR+TM KAE +  G+Q FF++VDE T           NPCL
Sbjct: 722  RVLVGCLDETGNLDYGQVYVRITMTKAEQEM-GDQSFFQKVDETTLVVTGKVVVTKNPCL 780

Query: 2503 HPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPP 2682
            HPGDVRVL+AV+DV L+E N+VDCL+FPQKG+RPHPNECSGGDLDGDL+FISWD +L+P 
Sbjct: 781  HPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPS 840

Query: 2683 RTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSK 2862
             TV PMDY+ RRPRIMDH VTLEEIQKFF DYMI+D LG ISTAHL+HAD EPDKAL+ K
Sbjct: 841  HTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPK 900

Query: 2863 CLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQF 3042
            CL+LA+LHSMAVDFAKTGAPAEM R LKP+EFPDFMER +KPMY+S+GALGKLYRA V  
Sbjct: 901  CLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGS 960

Query: 3043 IHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVE 3222
            + Q KTN   S+ I   AYD DL VDG +S L+ A+ H++ Y+++M T++NYYGA +E E
Sbjct: 961  VLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDE 1020

Query: 3223 ILTGNLQKKS 3252
            ILTGNL+ ++
Sbjct: 1021 ILTGNLRNRA 1030


>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score = 1317 bits (3408), Expect = 0.0
 Identities = 650/1029 (63%), Positives = 809/1029 (78%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV+V+NIPQ+AIA +L TFLES LG  +VFA+EI TERKNWKSRG GRVQF +  AK+ A
Sbjct: 9    TVRVTNIPQTAIATDLQTFLESKLGPNSVFAVEISTERKNWKSRGFGRVQFTSLAAKLVA 68

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
             +LS     +FR   L I  + +DI+  P++PK R+E+G   VL AG M+R D M +L+S
Sbjct: 69   QALSLSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDG---VLHAGFMIRDDRMAVLQS 125

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GV+ W MPE+ ++EF+V  + +CYKLEV F DVLET G CLD  D K+ A LL L++ 
Sbjct: 126  WEGVRAWAMPERNRVEFWVWSDEDCYKLEVAFEDVLETVGYCLD--DGKLYAFLLQLKYG 183

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            PKI+K+IS P   SKF  DRYHI KEDF++ WVRTTDF   KSIG+ +SLCW+ +E   +
Sbjct: 184  PKIYKRISRP---SKFVADRYHICKEDFEFHWVRTTDFLESKSIGHSTSLCWDAKEDFLS 240

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
             D +   PYY + + +L+LE+  +F   S+ VP++   +   + YE+LFQLNSLVH QK+
Sbjct: 241  SDTFRSFPYYREGMKDLILEDSDEFCSVSETVPLIKCPAGSNLSYEILFQLNSLVHMQKI 300

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            S AS D  L E   SL++DTA  ++QK+HKL STCY+P S  + +  I   N +N +SA 
Sbjct: 301  SFASADADLIEYFGSLNIDTANAVIQKLHKLKSTCYDPLSLAKTYAHILEKNTKNPSSA- 359

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
             K LT+ + MSCHR L+TPSK +C+GPELE+SNY+VKNFA+YASDFLRVTFV+EDWG++ 
Sbjct: 360  IKRLTENSLMSCHRALITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFVEEDWGKLH 419

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
               VS SI+Q IFAKPYRT IY RILS+LR+GI+IG K++EFLAFSASQLRS++VWMFAS
Sbjct: 420  PHVVSTSIEQGIFAKPYRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRSSAVWMFAS 479

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND++KAEDIREWMGCFNKIRS+SKCAARMGQLFSSS QTL V  +D++ IPD+EV +DG+
Sbjct: 480  NDNVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGI 539

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +FA+ + +K GL   PSAFQIRYGGYKGVI V+R SFRKL+LRSSML
Sbjct: 540  DYCFSDGIGKISSSFARQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSML 599

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+S+N MLN+TKWS S PCYLNREI++LLS+LGV+D  FLA+  EQL  LG++ T  EA
Sbjct: 600  KFESSNRMLNVTKWSGSMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLGKMRTNREA 659

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A+NVLE+  G +   +L++MLLQGY+P  EPYLS ++QS+ ENQL+DL++R RIFVPKG+
Sbjct: 660  ALNVLENLNGSDSSNILVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRCRIFVPKGK 719

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLH 2505
            VL+GCLDETGILEYGQVYVR+TM KAE++  GNQ FFR+VD+ TS          NPCLH
Sbjct: 720  VLIGCLDETGILEYGQVYVRLTMKKAELE-AGNQSFFRKVDDETSIVVGKVVVTKNPCLH 778

Query: 2506 PGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPR 2685
            PGDVRVLEAV+D KL+E  LVDCLVFPQKG+RPHPNECSGGDLDGDL+FISWD NLIPPR
Sbjct: 779  PGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNLIPPR 838

Query: 2686 TVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKC 2865
            T  PMDY GRRPRIMDHDVTLEEIQKFF DYMI+DTLG ISTAHLIHADREP+KA S  C
Sbjct: 839  TTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPEKAFSENC 898

Query: 2866 LELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFI 3045
            L+LA LHSMAVDFAKTGAPAEMPRAL+PR++PDFMER ++PMYVS+GALGKLYRATV+  
Sbjct: 899  LQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRATVESE 958

Query: 3046 HQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEI 3225
             Q  +N   S+     AYD DL V+G++ F+  AE+H++ Y+D+M  ++NYY  ESE E+
Sbjct: 959  SQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELESEDEV 1018

Query: 3226 LTGNLQKKS 3252
            LTGNL+K++
Sbjct: 1019 LTGNLRKRA 1027


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score = 1296 bits (3354), Expect = 0.0
 Identities = 629/1029 (61%), Positives = 799/1029 (77%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV+V+NIP +  A ELL FLES LG  +VFA+EI ++ KNWKSRG+GR+QF     K +A
Sbjct: 11   TVRVTNIPCTITATELLHFLESALGPDSVFAVEIVSDHKNWKSRGYGRIQFTALRHKARA 70

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
             SLS    L F+   L +  + +DII RPL+P++R+ +    VL AG +V  + M +LES
Sbjct: 71   QSLSSSADLFFKSHNLRLFEAHDDIIPRPLDPRHRLNS---TVLHAGFVVNDETMSVLES 127

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GV+ WVMPE+K++EF+V   G+CYK+E+ F +++E+ GCCL GD  KV+A+ L L+  
Sbjct: 128  WEGVRAWVMPERKRVEFWVWRVGDCYKMEIAFENIVESVGCCLGGD--KVNALRLKLKFG 185

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            PKIF+++SGPNVASKF+ DRYH+ KEDFDYLWVR TDFS +KSIG+ ++ CWEI+E  + 
Sbjct: 186  PKIFRQLSGPNVASKFSADRYHVCKEDFDYLWVRCTDFSEMKSIGHSTAFCWEIQEDVAA 245

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
              ++T  P + KDV++L+ E+G      S+ VP+V   +D + PYE+LFQLN LVH QK+
Sbjct: 246  AGVFTTFPSFRKDVVDLMFEDGGDCLLVSETVPLVKCEADMKFPYEILFQLNVLVHAQKI 305

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SLA+V + L E    L MDTA ++L+K+ KL +TCY+P SF++    +   N +   S +
Sbjct: 306  SLAAVGSDLIEFFGGLSMDTANVLLEKLQKLKTTCYDPLSFVKVQLQLLERNSKKRLSPH 365

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
             + L + N MSCHRVL+TPSK +C+GPELE SNY+VKNFA YASDF+RVTFV+EDWG++ 
Sbjct: 366  QR-LMEHNVMSCHRVLITPSKIYCLGPELEKSNYVVKNFAQYASDFMRVTFVEEDWGKLP 424

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
              A+S SI+Q  FAKP+RT IY+RILS+LRDGIVIGDK+FEFLAFSASQLRSNSVWMFAS
Sbjct: 425  VNALSTSIEQGFFAKPFRTGIYQRILSILRDGIVIGDKRFEFLAFSASQLRSNSVWMFAS 484

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND +KAEDIR+WMGCFNKIRS+SKCAARMGQLFSSS QTL V  +D++ IPDIE  +DGV
Sbjct: 485  NDSVKAEDIRDWMGCFNKIRSVSKCAARMGQLFSSSTQTLTVPQKDVELIPDIETTTDGV 544

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +FA+ + +K GL   PSAFQIRYGGYKGVI VDR SFRKL+LRSSML
Sbjct: 545  SYCFSDGIGKISLSFARQVAQKCGLNDTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSML 604

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KFDS+N MLN+TKWS S PC+LNREIITL+STLGVED  F A+Q EQL  LGR+      
Sbjct: 605  KFDSDNRMLNVTKWSSSMPCFLNREIITLMSTLGVEDEAFEALQQEQLDLLGRMRKDRNV 664

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A++ LE   G +   +L+++LLQGY+P  EPYLS +LQ+H E+ LADL+SR R++VPKGR
Sbjct: 665  ALSSLEKLSGADSNNILVKLLLQGYEPNLEPYLSMMLQAHYEHHLADLKSRCRMYVPKGR 724

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLH 2505
            +LVGCLDETG L YGQVY+R+TM KAE +  G+Q FF+RVDE T           NPCLH
Sbjct: 725  ILVGCLDETGTLNYGQVYLRITMTKAEQEM-GHQSFFQRVDEATCIVTGKVVVTKNPCLH 783

Query: 2506 PGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPR 2685
            PGD+RVLEAV+DV L+E N+VDC++FPQKG+RPHPNECSGGDLDGDL+FISWD +LIPP 
Sbjct: 784  PGDIRVLEAVYDVGLEEKNMVDCILFPQKGERPHPNECSGGDLDGDLFFISWDKSLIPPT 843

Query: 2686 TVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKC 2865
            TV PMDY+ RRPR MDHDVTLEEIQKFF DYMI+D LG ISTAHL+H+D EP+KA+S KC
Sbjct: 844  TVPPMDYSARRPRNMDHDVTLEEIQKFFVDYMINDNLGAISTAHLVHSDHEPEKAMSKKC 903

Query: 2866 LELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFI 3045
            LELA+LHSMAVDFAKTGAPAE+   LKP+EFPDFMER E+PMY+S+GALGKLYRA    +
Sbjct: 904  LELADLHSMAVDFAKTGAPAELSWILKPKEFPDFMERVERPMYISNGALGKLYRAIRSSV 963

Query: 3046 HQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEI 3225
             Q +T    S     +AYD +L V G++SFL+ AE+H+++Y+++M +L+NYY A +E EI
Sbjct: 964  VQEQTIVVWSQQRAEEAYDRELEVQGFESFLEMAESHRDKYIEKMRSLMNYYEATTEDEI 1023

Query: 3226 LTGNLQKKS 3252
            LTGNL+ ++
Sbjct: 1024 LTGNLRNRA 1032


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score = 1294 bits (3349), Expect = 0.0
 Identities = 640/1046 (61%), Positives = 808/1046 (77%), Gaps = 17/1046 (1%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV VSNIPQ+AIA++LL FLES LGK +VFA+EI T+R NWKSRG GRVQF + D K KA
Sbjct: 5    TVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSKA 64

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
             +LS   KL+F    L IS + +DI+ RP++ ++RVE+G   VL  G+M + + + +L++
Sbjct: 65   QNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDG---VLHVGVMCKEERLRVLQT 121

Query: 526  WDGVKLWVMPEKKKLEFFV--NHEGE---------------CYKLEVQFGDVLETRGCCL 654
            ++GV+ W++P++++LEF+V   H GE               C+K+E+ F DVLET G  L
Sbjct: 122  FEGVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSL 181

Query: 655  DGDDKKVDAILLTLRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKS 834
            D +   V+ IL  L++ PKI++K+SGP+VASKF +DRYHI KEDFD+ WVRTTDFS  KS
Sbjct: 182  D-EGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKS 240

Query: 835  IGYLSSLCWEIEEGSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRI 1014
            IG  +S  WEI+ G    DI    P+Y +D  +L+LEEG +F   S++VP+V     F +
Sbjct: 241  IGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNL 300

Query: 1015 PYEVLFQLNSLVHTQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIR 1194
             +EVLFQLNSLVH QK+SL + D  L +IL+ L M+TA+++LQK+HKL S CY+P SF++
Sbjct: 301  SHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKLHKLKSICYDPVSFVK 360

Query: 1195 NHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYA 1374
                +   N +++  ++ K L D N MSC+R LVTP K +C+GPELE+SNY+VKNFA YA
Sbjct: 361  TQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYA 420

Query: 1375 SDFLRVTFVDEDWGRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFL 1554
            SDF+RVTFV+EDW ++   A+S SI++ IFAKPYRT IY RIL++L+DGIVIGDK +EFL
Sbjct: 421  SDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTILQDGIVIGDKHYEFL 480

Query: 1555 AFSASQLRSNSVWMFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVH 1734
            AFSASQLR+NSVWMFASND + AED+REWMGCFNKI S+SKCAARMGQLFSSS QTL V 
Sbjct: 481  AFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSSSKQTLVVP 540

Query: 1735 PRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVI 1914
             +D++ IPD+EV SDG  YCFSDGIGKIS +FA+ + +K GL H PSAFQIRYGGYKGVI
Sbjct: 541  VQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVI 600

Query: 1915 VVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAM 2094
             VDR SFRKL+LR SMLKF+S N MLN+TKWSES PC+LNREII+LLSTLGV+D VF AM
Sbjct: 601  AVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDDVFEAM 660

Query: 2095 QDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLEN 2274
            Q +QL  LG++L   EAA++VL+   G + K +L++MLLQGY+P  EPYLS +L SH EN
Sbjct: 661  QQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHEN 720

Query: 2275 QLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDEN 2454
            QL+DL+SR RI+VPKGR+L+GC DETGIL YGQV+VRVTM + E++   +Q FF RVD+ 
Sbjct: 721  QLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELE-SKDQSFFHRVDDK 779

Query: 2455 TSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDL 2634
            TS          NPCLHPGDVRVLEAV+++KL+E + VDC++FPQKG+RPHPNECSGGDL
Sbjct: 780  TSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDL 839

Query: 2635 DGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTA 2814
            DGD++FISWD++LIP  T  PMDYTGRR RIMDHDVTLEEI KFF DYMI+DTLG ISTA
Sbjct: 840  DGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTA 899

Query: 2815 HLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMY 2994
            HL+HADR+PDKA SSKCL LA LHSMAVDFAKTGAPAEMP ALKP+EFPDFMER +KP Y
Sbjct: 900  HLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRY 959

Query: 2995 VSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLD 3174
            +S G LGKLYRAT+  I Q+++NA  S+ I   +YD DL VDG+++FL  AE+HKE Y +
Sbjct: 960  ISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEE 1019

Query: 3175 EMGTLLNYYGAESEVEILTGNLQKKS 3252
            EM  L+NYYGA +E EILTGNL+ ++
Sbjct: 1020 EMNALMNYYGASTEDEILTGNLRNRA 1045


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 631/1029 (61%), Positives = 804/1029 (78%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            T++VSN+P+SAIAQ+LL FL S LG  +VFAIEIFTERKNWKSRG GRVQF   +AK KA
Sbjct: 8    TLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKA 67

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
            +SLS Q  L+F    L  S   +DI+ RP+   NR ENG   VL  G M++ + M +LES
Sbjct: 68   MSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENG---VLHVGFMLKEERMSVLES 124

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GVK W+MPE++++EF++ HE ECYKLEV F ++LET G CL   ++K++A+LL L++A
Sbjct: 125  WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLNALLLKLKYA 182

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            P+I+KKISG N+AS+F++ RY +  ED+DYLWVRTT+FS ++S+G  +S CWE+EE    
Sbjct: 183  PRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 242

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
             DI++C P+Y +   ++VLE+G +F   S++VP++ +     + YEV +QLNSLVH QK+
Sbjct: 243  SDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKI 302

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SL++ +  L + L +LD+DTA+ +LQ++H+L   CY+P SF++    +   N ++L  ++
Sbjct: 303  SLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSS 362

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
             K L++ N M+C+RVLVTPS+ +C+GPELE+SNY+VKNF+SYASDF+RVTFV+EDW ++ 
Sbjct: 363  QKRLSN-NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLP 421

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
              AV+ SI++ I +KPYRT+IY RI++VLRDGIVIG K+FEFLAFSASQLRSNSVWMFAS
Sbjct: 422  AGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS 481

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            +D++KAE+IR+WMGCF KIRSISKCAARMGQLFSSS QTL V  RD++ IPDIEV +DG+
Sbjct: 482  SDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGI 541

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +FA+ +  K G+ HIPSAFQIRYGGYKGVI VDR SFRKL+LR SML
Sbjct: 542  DYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSML 601

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+S N MLN+TK  +S PCYLNREI TLLSTLGV+D  F A+Q EQL  L R+LT  + 
Sbjct: 602  KFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDV 661

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A+NVLE+  G +   +L++ML  GY+P  EPYLS +LQ+H  N  +DLRSR RIFVPKGR
Sbjct: 662  ALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGR 721

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLH 2505
            +L+GCLDETGIL YGQVY  +T+ K+E+Q   NQ +F  +DE  S          NPCLH
Sbjct: 722  ILLGCLDETGILNYGQVYACITLTKSELQ-SRNQNYFHTIDETKSILLGKVVVTKNPCLH 780

Query: 2506 PGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPR 2685
            PGDVRVLEA++ V+L+E  LVDCL+FPQKG RPH NECSGGDLDGDLYFISWD+NLIPP+
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 2686 TVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKC 2865
            T  PMDYTGRRPRIMDHDV LEEIQKFF DYMI+DTLG ISTAHL+HADREP KALS+KC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900

Query: 2866 LELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFI 3045
            LELA LHSMAVDFAKTGAPAEMPR LKPREFPDFMER++KPMY+S   LGKLYRA V+ I
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960

Query: 3046 HQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEI 3225
             Q ++    S+      YD DL VDG+++FL+ AET+KE Y+++M  L+NYYGAE E EI
Sbjct: 961  EQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020

Query: 3226 LTGNLQKKS 3252
            L G+L+ ++
Sbjct: 1021 LMGDLRSRA 1029


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
          Length = 1122

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 627/1033 (60%), Positives = 807/1033 (78%), Gaps = 2/1033 (0%)
 Frame = +1

Query: 160  TLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKI 339
            T TV+V NIPQSA A++LL FLES +G  +VFA+EIF++  NWKSRG GRVQF+  +AK 
Sbjct: 8    TPTVRVFNIPQSATAKDLLHFLESTVGPSSVFALEIFSDHSNWKSRGSGRVQFETFEAKS 67

Query: 340  KALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGIL 519
            KALSLS   KLLF   +L ++ S +DI+ RP  P NR+ NG    L AG  +  D M ++
Sbjct: 68   KALSLSSNDKLLFNSHFLRLAASSDDIVPRPPLPCNRLHNG---TLHAGFPLGPDRMSVI 124

Query: 520  ESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLR 699
            +SW+GVK WVMPE+ +L+F+V H  +C+KLE+ F ++LE  G   DG   K +A+LL L+
Sbjct: 125  QSWEGVKGWVMPERNRLDFWVTHHDQCFKLEIPFENILECDGFSSDGS--KPNALLLKLK 182

Query: 700  HAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGS 879
            + P+I++++ GPNV++KF  DRY   KEDF ++WVRTTDFS +KSIG+ +S CWEIEE S
Sbjct: 183  YGPRIYQRMEGPNVSAKFKADRYRFCKEDFAFMWVRTTDFSRLKSIGHSTSFCWEIEEES 242

Query: 880  SNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQ 1059
            S+ D++   P Y +++ +L LE+G +F   ++ VP+V    D ++PYE LFQLNSLVHTQ
Sbjct: 243  SDSDVFRSFPLYRENLKDLSLEDGEEFCSPTETVPLVKCRLDTKLPYEALFQLNSLVHTQ 302

Query: 1060 KMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTS 1239
            K+SLASVD  L ++++SLD +T  +I QK+HK+ STCYEP  F++    + S   ++L  
Sbjct: 303  KISLASVDDELIDLIASLDDETKAVIFQKLHKMSSTCYEPLRFVKTQLHVLSIKKKSLRP 362

Query: 1240 ANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGR 1419
            ++ K L D N MSCHR L+TPSK +C+GPELE+SN++VK+FASYASDF+R+TFV+EDW +
Sbjct: 363  SSQKRLADNNIMSCHRALITPSKIYCLGPELETSNHVVKHFASYASDFMRITFVEEDWSK 422

Query: 1420 ISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMF 1599
            +   AVS S+++ IFAKP+RTDIY+R+L++LRDGIVIG K+FEFLAFSASQLRSNSVW+F
Sbjct: 423  LPINAVSTSLQKGIFAKPFRTDIYKRVLTILRDGIVIGSKRFEFLAFSASQLRSNSVWLF 482

Query: 1600 ASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSD 1779
            ASND +KAEDIREWMG F  IRS+SKCAARMGQLFSSS QT E+ P+D+D IPDIE+ SD
Sbjct: 483  ASNDKVKAEDIREWMGSFTNIRSVSKCAARMGQLFSSSKQTFEMAPQDVDIIPDIELTSD 542

Query: 1780 GVKYCFSDGIGKISYAFAKDIVRKLGL--PHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            G+ YCFSDGIGKIS +FAK + +KL L    IPSAFQIRYGGYKGVI VDR SFRKL++R
Sbjct: 543  GINYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSAFQIRYGGYKGVIAVDRHSFRKLSMR 602

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
            +SMLKF+S N ML +TKWSES PC+LNREII+LLSTLGV+D   LAMQ+EQLQ LG++LT
Sbjct: 603  NSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEALLAMQEEQLQLLGKMLT 662

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++VLES  G + + +L++ML   Y+P +EPYLS +L++H   QL+DL+SR RIFV
Sbjct: 663  DREAALDVLESLSGADSRSILVKMLNGFYEPNSEPYLSMMLKAHYAYQLSDLKSRCRIFV 722

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGRVL+GCLDETGIL YGQV+VR+T+ K + + G         D++T           N
Sbjct: 723  PKGRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENLQNVDGDDSTRIIVGKVVVTKN 782

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGD+RVL+A+++ +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWD +L
Sbjct: 783  PCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFISWDKDL 842

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IPP+T  PMDYTGRRPRIMDH VTLEEI +FF DYMI+DTLG ISTAHL+HADREP+KA 
Sbjct: 843  IPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREPEKAR 902

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            S KCLELA LHSMAVDFAKTGAPAEMPRALKPREFPDFMER++KPMY+S+G LGKLYRA 
Sbjct: 903  SRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRAL 962

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            V+   Q+++N  LS+    +AYD  L V+G+++FL+TA +HKE Y  +M +L+++Y AE+
Sbjct: 963  VESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAET 1022

Query: 3214 EVEILTGNLQKKS 3252
            E E+LTGNLQ ++
Sbjct: 1023 EDEMLTGNLQNRA 1035


>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 628/1033 (60%), Positives = 801/1033 (77%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            RPTL  +V+N+PQ+AIA++LL FLE  LG  TVFAIEI T+R NWKSRG GRVQF   +A
Sbjct: 13   RPTL--RVTNVPQTAIAKDLLEFLEYKLGTDTVFAIEISTDRNNWKSRGFGRVQFATLEA 70

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
            K KA  LS +  L+F+   L +S +++DII RP+   +R++ G   VL  G MV+ D + 
Sbjct: 71   KSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGG---VLHVGFMVQDDYLR 127

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLT 693
            +LE W+ V+ W+MPE+++LEF++ + GECYKLEV F DVLET GCC +G     +A+LL 
Sbjct: 128  VLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSS--CNALLLR 185

Query: 694  LRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEE 873
            +++AP+I++K+SGPN+ASK   DRYHI KE+FD+LWVRTTDFS  K++G  ++  WEI  
Sbjct: 186  VKYAPRIYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVGQSTAFYWEINA 245

Query: 874  GSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVH 1053
                LD+++C   Y +D+  L L+ G +F+ A ++VP+V   SD ++ YE+LFQLNSLVH
Sbjct: 246  ELLTLDLFSCFSCYREDMKGLTLKGGGEFSSAPEIVPLVKGPSDSKLAYEILFQLNSLVH 305

Query: 1054 TQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENL 1233
            TQK+S+ASVDT L +IL  L ++TA++ILQK HKL STCY P SF++ +  ++  N ++ 
Sbjct: 306  TQKISIASVDTDLIDILRVLAVETAVMILQKFHKLLSTCYNPVSFVKENLPVSERNFQSR 365

Query: 1234 TSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDW 1413
              ++ K L D N MSCHR LVTPSK +C+GPELE+SNY+VKNFA YASDF+RV+FV+EDW
Sbjct: 366  PLSSFKRLIDHNVMSCHRALVTPSKIYCLGPELETSNYVVKNFAEYASDFMRVSFVEEDW 425

Query: 1414 GRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVW 1593
            G++S  A+S S++  IF+KP+RT IY RILSVL+ GIVIGDK+FEFLAFSASQLRSNSVW
Sbjct: 426  GKLSANAISTSVQLGIFSKPFRTKIYHRILSVLQHGIVIGDKRFEFLAFSASQLRSNSVW 485

Query: 1594 MFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVV 1773
            MFASND + AED+REWMGCF KIRS+SKCAARMGQLFSSS+ TL V  +D+  IPDIEV 
Sbjct: 486  MFASNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLFSSSLPTLVVPVQDVKIIPDIEVT 545

Query: 1774 SDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            SDG+ YCFSDGIGKIS  FA+++ +K GL   PSAFQIRYGGYKGV+ VDR SFRK++LR
Sbjct: 546  SDGINYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQIRYGGYKGVVAVDRNSFRKMSLR 605

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SM KF+S   MLN+TKWSES PC+LNREI+TLLSTLG++D  F  +Q EQL  LG++LT
Sbjct: 606  GSMHKFESKIRMLNVTKWSESMPCFLNREIVTLLSTLGIKDEAFETLQQEQLHLLGQMLT 665

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++VL+S  G + + +L++MLLQGY+P  EPYLS +L ++  + L+DL+ R RI+V
Sbjct: 666  NREAALDVLQSLCGADSQNILVKMLLQGYEPNVEPYLSMMLLANHVSLLSDLKCRCRIYV 725

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKG+VLVGCLDET  L YGQVYVR+++ KAE++   +Q FF +VDE T+          N
Sbjct: 726  PKGQVLVGCLDETATLNYGQVYVRLSIKKAELE-HADQNFFHKVDEKTAIVIGKVVVTKN 784

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGDVRVLEAV++ +L++  LVDCLVFPQKG+RPHPNECSGGDLDGD +FISWD +L
Sbjct: 785  PCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDL 844

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +T  PMDYTG RPRIMDH+VTLEEIQKFF DYMI+DTLG ISTAHL+HADREPDKA 
Sbjct: 845  IPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKAR 904

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            S KCLELA LHSMAVDFAKTGAPAEMPR+LKPREFPDFM+R +KPMY S G LGKLYRAT
Sbjct: 905  SEKCLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLYRAT 964

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            +    Q ++    S  +    YD DL V+G+++FL TA+THK+ Y ++M  L+NYY  ES
Sbjct: 965  INSTVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYEVES 1024

Query: 3214 EVEILTGNLQKKS 3252
            E EILTGN++ K+
Sbjct: 1025 EDEILTGNMRNKA 1037


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score = 1273 bits (3295), Expect = 0.0
 Identities = 636/1029 (61%), Positives = 799/1029 (77%), Gaps = 1/1029 (0%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            +V+V+NIPQ+  A+E+L +L + LGK +VFAIEI T RKNW SRG GRVQF + + K +A
Sbjct: 9    SVRVTNIPQTITAKEILQYLVAQLGKDSVFAIEISTVRKNWNSRGFGRVQFSSLEVKHEA 68

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
            LSLS + KL+ +   L +S +++DII RP++ +NR+ENG   VL  G M +   + +LE 
Sbjct: 69   LSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENG---VLYVGFMKKETTLCVLEY 125

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGEC-YKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRH 702
            W+GV+ W MPE++++EF++    E  YKL V+F D+LE  G  LDGD  KV+A++L LR+
Sbjct: 126  WEGVRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGD--KVNAVVLKLRY 183

Query: 703  APKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSS 882
             P+I++KISGP +ASKF+T+RY   KEDFD+LWVRTTD S +KSIG  +S CWEI EG  
Sbjct: 184  GPRIYQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLE 243

Query: 883  NLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQK 1062
              D +   PYY +D+  L LE+G +F  AS+ VP++   SD ++ YEVLFQLNSLVHTQK
Sbjct: 244  ASDTFRNFPYYQEDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQK 302

Query: 1063 MSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSA 1242
            +SLA+VD+ L +IL +L ++TAI+ILQK+HKL  TCY+P SF++          E+L+S 
Sbjct: 303  ISLAAVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQSLR------ESLSSP 356

Query: 1243 NSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRI 1422
              KSLT+ N MSCHR L+TPSK FC+GPE E+SNY+VK+FA YASDF+RVTFV+EDW ++
Sbjct: 357  -PKSLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKL 415

Query: 1423 STTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFA 1602
               A+S SI++ IFAKP+RT IY RILS+LRDG VIG K+FEFLAFSASQLRSNSVWMFA
Sbjct: 416  PANAISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFA 475

Query: 1603 SNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDG 1782
            SN+ +KAEDIR+WMGCF+KIRS+SKCAARMGQLFSSS+QT  V  +D++ IPDIEV +DG
Sbjct: 476  SNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDG 535

Query: 1783 VKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSM 1962
            + YCFSDGIGKIS +FAK +  K GL H PSAFQIRYGGYKGV+ VDR SFRKL+LRSSM
Sbjct: 536  IDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSM 595

Query: 1963 LKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTE 2142
            LKFDS N MLN+TKWSES PCYLNREII+LLSTLGV D +F A+Q +QL  L ++LT  E
Sbjct: 596  LKFDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKE 655

Query: 2143 AAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKG 2322
            +A++VLE+    + K +L++MLLQGY+P  EPYLS +LQ++ EN L +LRSR RIFVPKG
Sbjct: 656  SALDVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKG 715

Query: 2323 RVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCL 2502
            R+L+GCLDE+GIL+YGQVYVR+TM KAE+QC  +Q FFR+VDE+TS          NPCL
Sbjct: 716  RILIGCLDESGILDYGQVYVRITMTKAELQC-CDQSFFRKVDESTSTIIGEVAVTKNPCL 774

Query: 2503 HPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPP 2682
            HPGD+RVLEAV+DV+L+E  LVDC++FPQ G RPHPNECSGGDLDGD +FISWD+ L+P 
Sbjct: 775  HPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPC 834

Query: 2683 RTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSK 2862
             T  PMDY G R RIMDH+VTLEEIQ+FF DYMI+DTLG ISTAHL+HAD EPDKA S K
Sbjct: 835  HTEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEK 894

Query: 2863 CLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQF 3042
            CL+LA LHSMAVDFAKTGAPAEMP  LKPREFPDFMER EK MY+S G LGKLYR     
Sbjct: 895  CLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDS 954

Query: 3043 IHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVE 3222
              Q ++N   S  I    YD DL V G++ FL  A  +KE+Y+++M TL++YYGA++E E
Sbjct: 955  TRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDE 1014

Query: 3223 ILTGNLQKK 3249
            ILTGNL+ +
Sbjct: 1015 ILTGNLRHR 1023


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
            max]
          Length = 1121

 Score = 1270 bits (3287), Expect = 0.0
 Identities = 620/1031 (60%), Positives = 803/1031 (77%), Gaps = 2/1031 (0%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV+VSNIPQSA A++LL FLES +G  TVFA+EIF++  NWKSRG GRVQF+  DA+ +A
Sbjct: 12   TVRVSNIPQSATAKDLLDFLESTVGPSTVFALEIFSDNPNWKSRGFGRVQFETLDARSRA 71

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
            LSLS    LLF   +L +S +  DIIFRP   ++R+ NG   VL AG ++    M +LES
Sbjct: 72   LSLSQLNHLLFHRHFLRLSETDADIIFRP---QHRLHNG---VLYAGFVLSDHRMSVLES 125

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GV  WV+P +K+L+F+V H G+CY+LE  F D+LE+ G CL G+D K++A+LL ++  
Sbjct: 126  WEGVAGWVLPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYCL-GEDAKLNALLLKMKFG 184

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            P+I+KK +G +VA+KF  DRY   KEDF++LWVRTTDFS +KSIG+ +S CWEI E    
Sbjct: 185  PRIYKKKTGADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLA 244

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
            LD++   P Y +++ +L LE+G +F  +++ VP+V   S  ++PYE LFQLNSLVHTQK+
Sbjct: 245  LDVFKSFPLYKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKI 304

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SLASVD  L ++L+ LD +T  +I  K+HK+  TCYEP  F++    + S+  + L  ++
Sbjct: 305  SLASVDDELIDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSS 364

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
             K LTD N MSCHR L+TP+K +C+GPELE+SN++VK+FAS+ASDF+R+TFV+E+W ++ 
Sbjct: 365  QKRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASHASDFMRITFVEENWNKLP 424

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
            T AVS  +++ +F+KP +T+IY+RIL++LRDGIVIG K+FEFLAFSASQLRSNSVW+FAS
Sbjct: 425  TNAVSTGVQKGLFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 484

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND++KA DIREWMGCFN IRS+SKCAARMGQLFSSS+QT EV  +D++ IPD+EV+SDGV
Sbjct: 485  NDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVVSQDVEIIPDVEVISDGV 544

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +FA+ + +KL L H PSAFQIRYGG+KGVI VDR+SFRKL+LRSSML
Sbjct: 545  SYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGFKGVIAVDRRSFRKLSLRSSML 604

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+S N ML +TKWSES PC+LNREII+LLSTLGV+D V LAMQ +QL  LGR+LT ++A
Sbjct: 605  KFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKA 664

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A+ VLES  G + K +L++ML +  +P +EPYLS +L+++   QL+DL+SR RIFVPKGR
Sbjct: 665  ALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGR 724

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRV--DENTSXXXXXXXXXXNPC 2499
            VLVGCLDETG+L YGQV+VR+T+ K   + G      R+V  D+NT           NPC
Sbjct: 725  VLVGCLDETGLLNYGQVFVRITVTKTREKFGDEN--LRKVDGDDNTCIIVGKVVVTKNPC 782

Query: 2500 LHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIP 2679
            LHPGD+RVL+A++  +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWD +LIP
Sbjct: 783  LHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIP 842

Query: 2680 PRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSS 2859
             +T  PMDYTGRRPRIMDH VTLEEIQ+FF DYMI+DTLG ISTAHL+HADRE DKA S 
Sbjct: 843  CQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSR 902

Query: 2860 KCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQ 3039
            KCLELA LHSMAVDFAKTGAPA MPR LKPREFPDFMER +KPMY+S G LGKLYRA ++
Sbjct: 903  KCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIE 962

Query: 3040 FIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEV 3219
               Q++ +   S+    +AYD  L V+G+++FL+TA THKE Y ++M +L+++YGAE+E 
Sbjct: 963  SQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETED 1022

Query: 3220 EILTGNLQKKS 3252
            E+L GNLQ ++
Sbjct: 1023 EMLLGNLQNRA 1033


>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1308

 Score = 1261 bits (3262), Expect = 0.0
 Identities = 606/1033 (58%), Positives = 801/1033 (77%), Gaps = 2/1033 (0%)
 Frame = +1

Query: 160  TLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKI 339
            T TV+V+NIP +A A +LL +LE+ +G+ +VFA+EIF++  NWKSRG GRVQF+  +AK 
Sbjct: 8    TPTVRVTNIPHTATANDLLRYLETTVGRSSVFALEIFSDYTNWKSRGVGRVQFETLEAKS 67

Query: 340  KALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGIL 519
            KAL+L+  +KLL    +L +  S +DII RP  P+NR+ NG    L AG  +  DCM +L
Sbjct: 68   KALTLAENKKLLLSSHFLCLDASSDDIIPRPALPRNRINNG---ALYAGFPIGPDCMSVL 124

Query: 520  ESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLR 699
            +SW+GV+ WVMPE+++L+F+V H  +C+KLE+ F ++LE  G C D +  K +A+LL LR
Sbjct: 125  QSWEGVRGWVMPERQRLDFWVTHGDQCFKLEIPFENILECDGYCSD-EGSKPNALLLKLR 183

Query: 700  HAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGS 879
            + P+I++K++GPNVA+KF  DRY   KE+F+++WVRTTDFS +KSIG+ +S  WEI E S
Sbjct: 184  YGPRIYQKMAGPNVAAKFKDDRYRFCKENFEFMWVRTTDFSTLKSIGHSTSFFWEIVEES 243

Query: 880  SNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQ 1059
             + D++   P Y +++ +L LE+G KF   ++ VP+V    D ++PYE LFQLNSLVHTQ
Sbjct: 244  FDSDVFRSFPLYRENLKDLSLEDGEKFCSPTETVPLVKCRLDSKLPYESLFQLNSLVHTQ 303

Query: 1060 KMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTS 1239
            K+SLASV+  L ++L+SLD +T  +I QK+HK++STCYEP  ++R    + S   +++  
Sbjct: 304  KISLASVNDELIDLLASLDAETKAVIFQKLHKMNSTCYEPLKYVRTQLHVLSIKKKSVLP 363

Query: 1240 ANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGR 1419
            +  K L D N MSCHR L+TPSK +C+GPELE+SN++VK+FA+YASDF+R+TFV+EDW +
Sbjct: 364  SQQKRLVDNNIMSCHRALITPSKIYCLGPELETSNHVVKHFAAYASDFMRITFVEEDWSK 423

Query: 1420 ISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMF 1599
            +   A+S+++K+ +F++P RT+IY+R+L++LRDGI+IG K+FEFLAFSASQLRSNSVW+F
Sbjct: 424  LPNNAISITLKKGMFSRPLRTEIYKRVLNILRDGILIGSKRFEFLAFSASQLRSNSVWLF 483

Query: 1600 ASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSD 1779
            ASND +KA DIREWMG FN IRS+SKCAARMGQLFSSS QT E+ P+D+D IPDIE+ SD
Sbjct: 484  ASNDKVKAADIREWMGSFNNIRSVSKCAARMGQLFSSSRQTFEMAPQDVDLIPDIEITSD 543

Query: 1780 GVKYCFSDGIGKISYAFAKDIVRKLGLP--HIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            G+ YCFSDGIGKIS +FA+ +  KL L    IPSAFQIRYGGYKGVI VDR SF+KL+LR
Sbjct: 544  GIDYCFSDGIGKISQSFARQLAEKLKLDENRIPSAFQIRYGGYKGVIAVDRHSFKKLSLR 603

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SMLKF+S N ML +TKWSES PC+LNREII+LLSTLG++D   LA+Q++QLQ LG++LT
Sbjct: 604  KSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGIKDEALLALQEDQLQLLGKMLT 663

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++VLES  G +   +L++ML + Y+P +EPYLS +L++H   QL+DL+SR RIFV
Sbjct: 664  DKEAALDVLESLNGADSNSILVKMLHRFYEPNSEPYLSMMLKAHYTYQLSDLKSRCRIFV 723

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGRVL+GCLDETG+L YGQV+VR+T+ K + + G         D++T           N
Sbjct: 724  PKGRVLIGCLDETGLLNYGQVFVRITVAKTKEKFGDENLRNVDGDDSTRIIVGKVVVTKN 783

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGD+RVL+AV+  +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWD +L
Sbjct: 784  PCLHPGDIRVLDAVYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDL 843

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +T  PMDYTGRRPRIMDH VTLEEI +FF DYMI+DTLG ISTAHL+HADRE DKA 
Sbjct: 844  IPAQTENPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREHDKAK 903

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            S KCLELA LHSMAVDFAKTGAPAEMPR+LKPREFPDFMER+EKPMY+S G LGKLYRAT
Sbjct: 904  SRKCLELAELHSMAVDFAKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRAT 963

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            +    Q++ +  +S+    +AYD  L VDG++ FL+TA +H++ Y  +M +L+++YGA +
Sbjct: 964  IDSNLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATT 1023

Query: 3214 EVEILTGNLQKKS 3252
            E E+LTGNLQ ++
Sbjct: 1024 EDEMLTGNLQNRA 1036



 Score =  160 bits (405), Expect = 3e-36
 Identities = 80/113 (70%), Positives = 90/113 (79%)
 Frame = +1

Query: 2725 IMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDF 2904
            I+ H  +  +I KFF DYMI DTLG ISTAHL+HAD E +KA S KCLELA LHSMAVDF
Sbjct: 1110 ILLHIKSANKIHKFFVDYMIKDTLGAISTAHLVHADCESNKAKSRKCLELAELHSMAVDF 1169

Query: 2905 AKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTN 3063
            AKTGA AEMPR LKP+EFPDFMER+EKPMYVS G LGKLYRA V+   Q+ +N
Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRALVESTMQLTSN 1222


>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
          Length = 1119

 Score = 1260 bits (3261), Expect = 0.0
 Identities = 616/1029 (59%), Positives = 798/1029 (77%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV V NIP+SA A++LL F+ES +G  TVFA+EIF++  NWKSRG GRVQF+  DAK +A
Sbjct: 11   TVSVFNIPRSATAKDLLHFIESKVGSSTVFALEIFSDNVNWKSRGAGRVQFEALDAKSRA 70

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
            LSLS  ++LL    +L +S +  DIIFRPL   +R++NG   VL AG+M+  D M +LES
Sbjct: 71   LSLSQLQQLLIHSHFLRLSDTSEDIIFRPL---HRLQNG---VLYAGLMLSDDRMSVLES 124

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+GV   V+P+++KL+F V H+G+CY++E+ F D+LE+ G CL G + K++A+LL L+  
Sbjct: 125  WEGVAGLVVPQRRKLDFLVLHDGDCYRVEIFFEDILESHGYCL-GAEGKLNALLLKLKFG 183

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            PKI+KK  GP+VA+KF  DRYH  KED ++LWVRTTDFS +KSIG+ +S CWEI E    
Sbjct: 184  PKIYKKKMGPDVATKFRNDRYHFCKEDSEFLWVRTTDFSALKSIGHSTSFCWEIAEEQLA 243

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
             D++T LP Y +++ +LVLE+G +F  +++ VP+V   S  ++PYE LFQLNSLVHTQK+
Sbjct: 244  SDVFTSLPLYKENLRDLVLEDGEEFCSSTEAVPLVKCASQSKLPYEALFQLNSLVHTQKI 303

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SLASVD  L ++L  LD +   +I QK+H++  TCY+P  F++    + S+   +   ++
Sbjct: 304  SLASVDDELIDLLGGLDEEIRAVIFQKLHQMGFTCYDPLKFVKTQLHVLSNKKRSQPLSS 363

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
             K L D N MSCHR LVTP+K +C+GPELE+SN++VK+FAS ASDF+R+TFV+E+W ++ 
Sbjct: 364  QKRLIDNNIMSCHRALVTPTKIYCLGPELETSNHVVKHFASCASDFMRITFVEENWNKLP 423

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
              AVS  +++ IF+KP++T+IY+RIL++LRDGIVIG K+FEFLAFSASQLRSNSVW+FAS
Sbjct: 424  NYAVSTGVQKGIFSKPFKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 483

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND++KA DIREWMGCFN IRS+SKCAARMGQLFSSS+QT EV P+D++ IPDIEV SDGV
Sbjct: 484  NDNVKATDIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVAPQDVEVIPDIEVTSDGV 543

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS +F + + +KL L H PSAFQIR+GGYKGVI VDR SFRKL+LR+SML
Sbjct: 544  SYCFSDGIGKISQSFGRQVAQKLKLDHTPSAFQIRFGGYKGVITVDRHSFRKLSLRNSML 603

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+S N ML +TKWSES PC+LNREII+LLSTLGV+D  FLA Q +QL  LGR+LT ++A
Sbjct: 604  KFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEAFLARQQDQLNLLGRMLTDSKA 663

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A++VLE   G + + +L++ML +  +P +EPYLS +L+++   QL+DL+SR RIFVPKGR
Sbjct: 664  ALDVLEGLNGADSRSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRSRIFVPKGR 723

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXNPCLH 2505
            VLVGCLDETG+L YG+V+VRVT+ +   +   N R     D++T           NPCLH
Sbjct: 724  VLVGCLDETGLLNYGEVFVRVTVKRTTEKFDDNLR-KGGDDDSTRIIVGKVVVTKNPCLH 782

Query: 2506 PGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPR 2685
            PGDVRVL+A+++ +L+E  L DCLVFPQ G RPHPNECSGGDLDGDL+FISWD +LIP +
Sbjct: 783  PGDVRVLDAIYNEELEEKGLRDCLVFPQNGHRPHPNECSGGDLDGDLFFISWDKDLIPAQ 842

Query: 2686 TVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSSKC 2865
            T  PMDYTGRRPRIMDH VTLEEIQ FF DYMI+DTLG ISTAHL+HADREPDKA S KC
Sbjct: 843  TEAPMDYTGRRPRIMDHKVTLEEIQHFFVDYMINDTLGAISTAHLVHADREPDKAKSRKC 902

Query: 2866 LELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQFI 3045
            LELA LHSMAVDFAKTGAPA MPR LKPREFPDFMER EKPMY+S G LGKLYRA ++  
Sbjct: 903  LELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLYRAIIESQ 962

Query: 3046 HQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEI 3225
             Q+K +   S+ +  +AYD  L V+G+++FL+TA +HKE Y  +M +L+N+YGAE+E E+
Sbjct: 963  MQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYGAETEDEM 1022

Query: 3226 LTGNLQKKS 3252
            L GNLQ ++
Sbjct: 1023 LLGNLQNRA 1031


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1260 bits (3261), Expect = 0.0
 Identities = 623/1033 (60%), Positives = 784/1033 (75%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            RPTL  ++++IPQ+A+A++LL F ES LG  +VFAIEI T+R NWKSRG GRVQF    A
Sbjct: 8    RPTL--RLTHIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQA 65

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
            K  AL LS    LLF+   L +S +++DII RP+   +R++ G   VL AG M   DC+ 
Sbjct: 66   KSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGG---VLHAGFMSSDDCLR 122

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLT 693
            +LE W+GV+ W+MPE+++LEF+V  +GECYKL+  F D+ ET GCC DG     +A+LL 
Sbjct: 123  VLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGS--ACNALLLR 180

Query: 694  LRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEE 873
            +R+AP+I++K+SGPNVASKF+TDRYHI KE FD+LWVRTTDFS +KSIG  +S  WE   
Sbjct: 181  VRYAPRIYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNA 240

Query: 874  GSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVH 1053
            G S  D+ T LP Y +D+    LE   +F+  S++VP+V   SD ++ YE+LFQLN+LVH
Sbjct: 241  GFSISDMSTYLPCYREDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVH 300

Query: 1054 TQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENL 1233
            TQK+S+A+VDT L  ILS L ++TA++ILQK+  L S CY P SF++    + +     +
Sbjct: 301  TQKISIAAVDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVK--AKLPTGKNYRI 358

Query: 1234 TSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDW 1413
              + S+ L + N MSC R L+TP+K +C+GPELE++NY+VKNF  YASDF+RVTFV+EDW
Sbjct: 359  PLSVSERLKNHNVMSCRRALITPTKIYCLGPELETANYVVKNFVEYASDFMRVTFVEEDW 418

Query: 1414 GRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVW 1593
             ++S  A+S  +   +F++P++T IY RIL VL++GIVIGDK+FEFLAFSASQLRSNSVW
Sbjct: 419  SKLSANAISTGVHLGVFSRPFKTKIYDRILYVLQNGIVIGDKRFEFLAFSASQLRSNSVW 478

Query: 1594 MFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVV 1773
            MFASND +KAEDIREWMGCF KIRSISKCA+RMGQLFSSS+ TL V  +D++ I DIEV 
Sbjct: 479  MFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVK 538

Query: 1774 SDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            +DG+ YCFSDGIGKIS  FA+ +  K GL HIPSAFQIRYGGYKGV+ VDR SF K++LR
Sbjct: 539  TDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLR 598

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SMLKF+S   MLN+TKWSES PC+LNREI+TL STLG++D VF  MQ+EQL  LG++LT
Sbjct: 599  DSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLT 658

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++ L+S GG   K +L+ M LQ Y+P  +PYLS +LQ+H EN L+DL+SR RIFV
Sbjct: 659  NREAALDTLQSLGGVNSKNILVEM-LQFYEPNVQPYLSMMLQAHYENLLSDLKSRCRIFV 717

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGR+L+GCLDETG L YGQVY+ + M KAE++C  +Q +FR+VDE T+          N
Sbjct: 718  PKGRILIGCLDETGTLNYGQVYLCIKMKKAELEC-ADQSYFRKVDEETAIVIGKVVVTKN 776

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGDVRVLEAV++ +L+E  LVDCLVFPQKG+RPHPNECSGGDLDGD +FISWD +L
Sbjct: 777  PCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +T  PMDYTGRRPRIMDH+VTLEEIQKFF DYMI+DTLG ISTAHL+HADREPDKA 
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKAC 896

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            S  CL LA LHSMAVDFAKTGAPAEMPRALKPREFPDFM+R  KPMY S G LGKLYRAT
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            +    Q ++    +  +    YD DL V+G++S +  AETHKE Y + M  L++YY  E 
Sbjct: 957  INSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 3214 EVEILTGNLQKKS 3252
            E EILTGN+  K+
Sbjct: 1017 EDEILTGNIYNKA 1029


>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
          Length = 1120

 Score = 1259 bits (3257), Expect = 0.0
 Identities = 611/1031 (59%), Positives = 799/1031 (77%), Gaps = 2/1031 (0%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TV+VSNIPQSA A++LL FLES LG  TVFA+EIF++  NWKSRG GRVQF+  DA+ +A
Sbjct: 11   TVRVSNIPQSATAKDLLDFLESTLGSSTVFALEIFSDNPNWKSRGFGRVQFETLDARSRA 70

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMGILES 525
            LSLS   +LLF   +L +S + +DIIFRP   ++R++NG   VL AG M+    M +LES
Sbjct: 71   LSLSQLNQLLFNRHFLRLSETDSDIIFRP---QHRLQNG---VLYAGFMLSDHRMSVLES 124

Query: 526  WDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTLRHA 705
            W+G+  WV+P++K+L+F+V H G+CY+LE  F D+LE+ G CL G+D +++A+LL ++  
Sbjct: 125  WEGIAGWVLPQRKRLDFWVWHNGDCYRLEFLFEDILESHGYCL-GEDARLNALLLKMKFG 183

Query: 706  PKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEGSSN 885
            P+I+KK +G +VA+ F  DRY   KEDF++LWVRTTDFS +KSIG+ +S CWEI E    
Sbjct: 184  PRIYKKKTGTDVAANFRGDRYRFLKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLA 243

Query: 886  LDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKM 1065
             D++T  P Y +++ +L LE+  +    ++ VP+V + +  ++PYE +FQLNSLVHTQK+
Sbjct: 244  SDVFTSFPLYKENLRDLALEDREELCSLTEAVPLVKHATQSKLPYEAVFQLNSLVHTQKI 303

Query: 1066 SLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSAN 1245
            SLASVD  L ++L+ LD +T  ++ QK+HK+  TCYEP  F++    + S+  + L  + 
Sbjct: 304  SLASVDDELIDLLADLDEETRAVVFQKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLLQSP 363

Query: 1246 SKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDWGRIS 1425
               LTD N MSCHR L+TP+K +C+GPELE+SN++VK+FAS ASDF+R+TFV+E+W ++ 
Sbjct: 364  QNRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASLASDFMRITFVEENWNKLP 423

Query: 1426 TTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVWMFAS 1605
            T AVS  +++ IF+KP +T+IY+RIL++LRDGIVIG K+FEFLAFSASQLRSNSVW+FAS
Sbjct: 424  TNAVSTGVQKGIFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 483

Query: 1606 NDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVVSDGV 1785
            ND++KA DIREWMGCFN IRS+SKCAARMGQLFSSS+QT EV   D++ IPDIEV SDGV
Sbjct: 484  NDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVASEDVEMIPDIEVTSDGV 543

Query: 1786 KYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALRSSML 1965
             YCFSDGIGKIS  FA+ + +KL L H PSAFQIRYGG+KGVI +DR SFRKL+LRSSML
Sbjct: 544  SYCFSDGIGKISQCFARQVAQKLNLDHTPSAFQIRYGGFKGVIAIDRHSFRKLSLRSSML 603

Query: 1966 KFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILTKTEA 2145
            KF+SNN ML +TKWSES PC+LNREII+LL+TLGV+D V LAMQ +QL  LGR+LT ++A
Sbjct: 604  KFESNNRMLCVTKWSESMPCFLNREIISLLTTLGVKDEVLLAMQQDQLDLLGRMLTDSKA 663

Query: 2146 AVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFVPKGR 2325
            A++VLES  G + K +L++ML +  +P +EPYLS +L+++   QL+DL+SR RIFVPKGR
Sbjct: 664  ALDVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGR 723

Query: 2326 VLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRV--DENTSXXXXXXXXXXNPC 2499
            VLVGCLDETG+L YGQV+VR+T+ K     G      R+V  D++T           NPC
Sbjct: 724  VLVGCLDETGLLNYGQVFVRITVAKTRENFGDEN--LRKVDGDDSTRIIVGKVVVTKNPC 781

Query: 2500 LHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNLIP 2679
            LHPGD+RVL+A++  +L+E+ L DCLVFPQKG RPHPNECSGGDLDGDL+F+SWD +LIP
Sbjct: 782  LHPGDIRVLDAIYSKELEENGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFLSWDKDLIP 841

Query: 2680 PRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKALSS 2859
             +T  PMDYTGRRPRIMDH VTLEEIQ+FF DYMI+DTLG ISTAHL+HADRE DKA S 
Sbjct: 842  CQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSR 901

Query: 2860 KCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRATVQ 3039
            KCLELA LHSMAVDFAKTGAPA MPR LKPREFPDFMER +KPMY+S G LGKLY A ++
Sbjct: 902  KCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYHAIIE 961

Query: 3040 FIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEV 3219
               Q++ +   S+    +AYD  L V+G+++FL+TA THKE Y ++M +L+++YGAE+E 
Sbjct: 962  SQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETED 1021

Query: 3220 EILTGNLQKKS 3252
            E+L GN+Q ++
Sbjct: 1022 EMLLGNVQNRA 1032


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1255 bits (3247), Expect = 0.0
 Identities = 621/1033 (60%), Positives = 785/1033 (75%)
 Frame = +1

Query: 154  RPTLTVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADA 333
            RPTL  +++NIPQ+A+A++LL F ES LG  +VFAIEI T+R NWKSRG GRVQF    A
Sbjct: 8    RPTL--RLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQA 65

Query: 334  KIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGDCMG 513
               AL LS    LLF+   L +S +++DII RP+   +R++ G   VL AG M   DC+ 
Sbjct: 66   MSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGG---VLHAGFMSSDDCLR 122

Query: 514  ILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLT 693
            +LE W+GV+ W+MPE+++LEF+V  +GECYKL+  F D+ ET GCC DG     +A+LL 
Sbjct: 123  VLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGS--ACNALLLR 180

Query: 694  LRHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEE 873
            +R+AP+ ++K+SGPNVASKF+TDRYHI KE FD+LWVRTTDFS +KSIG  +S  WE   
Sbjct: 181  VRYAPRTYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNA 240

Query: 874  GSSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVH 1053
            G S  D+ T LP Y +D+    LE   +F+  S++VP+V   SD ++ YE+LFQLN+LVH
Sbjct: 241  GFSISDMSTYLPCYREDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVH 300

Query: 1054 TQKMSLASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENL 1233
            TQK+S+A+VDT L  ILS L ++TA++ILQK+  L S CY P SF++    + +     +
Sbjct: 301  TQKISIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVK--AKLPTGKNFRI 358

Query: 1234 TSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDEDW 1413
              + S+ L + N MSCHR L+TP+K +C+GPELE++NY+VKNFA YASDF+RVTFV+EDW
Sbjct: 359  PLSVSERLKNHNVMSCHRALITPTKIYCLGPELETANYVVKNFAEYASDFMRVTFVEEDW 418

Query: 1414 GRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSVW 1593
             ++S  A+S  +   +F++P++T IY RILS+L++GIVIGDK+F+FLAFSASQLRSNSVW
Sbjct: 419  SKLSANAISTGVHLGVFSRPFKTKIYDRILSILQNGIVIGDKRFKFLAFSASQLRSNSVW 478

Query: 1594 MFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEVV 1773
            MFASND +KAEDIREWMGCF KIRSISKCA+RMGQLFSSS+ TL V  +D++ I DIEV 
Sbjct: 479  MFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVK 538

Query: 1774 SDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLALR 1953
            +DG+ YCFSDGIGKIS  FA+ +  K GL HIPSAFQIRYGGYKGV+ VDR SF K++LR
Sbjct: 539  TDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLR 598

Query: 1954 SSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRILT 2133
             SMLKF+S   MLN+TKWSES PC+LNREI+TL STLG++D VF  MQ+EQL  LG++LT
Sbjct: 599  DSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLT 658

Query: 2134 KTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIFV 2313
              EAA++ L+S GG   K +L+ M LQ  +P  +PYLS +LQ+H EN L+DL+SR RIFV
Sbjct: 659  NREAALDTLQSLGGVNSKNILVEM-LQFDEPNVQPYLSMMLQAHYENLLSDLKSRCRIFV 717

Query: 2314 PKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXXN 2493
            PKGR+L+GCLDETG L YGQVY+ + M KAE++C  +Q +FR+VDE T+          N
Sbjct: 718  PKGRILIGCLDETGTLNYGQVYLCIKMKKAELEC-ADQSYFRKVDEETAIVIGKVVVTKN 776

Query: 2494 PCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDNL 2673
            PCLHPGDVRVLEAV++ +L+E  LVDCLVFP+KG+RPHPNECSGGDLDGD +FISWD +L
Sbjct: 777  PCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 2674 IPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKAL 2853
            IP +T  PMDYTGRRPRIMDH+VTLEEIQKFF DYMI+DTLG ISTAHL+HADREP KA 
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPYKAR 896

Query: 2854 SSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRAT 3033
            S  CL LA LHSMAVDFAKTGAPAEMPRALKPREFPDFM+R  KPMY S G LGKLYRAT
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 3034 VQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAES 3213
            +    Q+++    +  +   AYD DL V+G++S +  AETHKE Y + M  L++YY  E 
Sbjct: 957  INSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 3214 EVEILTGNLQKKS 3252
            E EILTGN+  K+
Sbjct: 1017 EDEILTGNMYNKA 1029


>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
            gi|482555639|gb|EOA19831.1| hypothetical protein
            CARUB_v10000076mg, partial [Capsella rubella]
          Length = 1165

 Score = 1215 bits (3143), Expect = 0.0
 Identities = 589/1033 (57%), Positives = 770/1033 (74%), Gaps = 5/1033 (0%)
 Frame = +1

Query: 166  TVKVSNIPQSAIAQELLTFLESNLGKGTVFAIEIFTERKNWKSRGHGRVQFDNADAKIKA 345
            TVKVSN+PQ+ +A ELL FLE +LG+ TVFAIEI T R+NWK R   RVQF   + K +A
Sbjct: 42   TVKVSNLPQTIVADELLRFLELHLGEDTVFAIEIPTTRENWKPRDFARVQFTTLEVKSRA 101

Query: 346  LSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIMVRGD---CMGI 516
              LS Q KLLF+   L +S +++DII RP++P+ R+++   +VL  G     +   C   
Sbjct: 102  QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDD---VVLTVGFPESSEERFCA-- 156

Query: 517  LESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCCLDGDDKKVDAILLTL 696
            LE W+GV+ W++ EK+++EF+V   G+CY++EV+F D++ET GCC++GD  +++A LL L
Sbjct: 157  LEKWEGVRCWILEEKRRVEFWVWESGDCYRIEVRFEDIVETLGCCVNGDAFEINAFLLKL 216

Query: 697  RHAPKIFKKISGPNVASKFTTDRYHISKEDFDYLWVRTTDFSNVKSIGYLSSLCWEIEEG 876
            ++ PK+FK+++GP++A+KF  +RY   KEDFD++W+RTTDFS  KSIG  +  C E++ G
Sbjct: 217  KYGPKVFKRVTGPHIATKFKPNRYCFCKEDFDFMWIRTTDFSGSKSIGISTCFCLEVDNG 276

Query: 877  SSNLDIYTCLPYYSKDVMELVLEEGVKFNHASDLVPIVTNNS-DFRIPYEVLFQLNSLVH 1053
            S  LDI++C PYY KD + L + +G  F  A  +VP++   S     PYE+LFQLNSLVH
Sbjct: 277  SEMLDIFSCFPYYRKDTLSLTIVDGNAFASACQIVPLLNAGSLGLEFPYEILFQLNSLVH 336

Query: 1054 TQKMSL-ASVDTGLFEILSSLDMDTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGEN 1230
             QK+SL A+ +  L  +   L +DTA++IL+K+H+  S CY+P SF+++         ++
Sbjct: 337  AQKISLFAASNKELINMFRGLSLDTALVILKKLHQQCSICYDPVSFVKSQMQSPIKKMKH 396

Query: 1231 LTSANSKSLTDQNTMSCHRVLVTPSKFFCVGPELESSNYIVKNFASYASDFLRVTFVDED 1410
              ++  K LT+QN MSC R  VTPSK + +GPELE +NY+VKNFA + +DF+R+TFV+ED
Sbjct: 397  SPASAHKRLTEQNIMSCQRAYVTPSKIYLLGPELEKANYVVKNFAEHVTDFMRITFVEED 456

Query: 1411 WGRISTTAVSMSIKQDIFAKPYRTDIYRRILSVLRDGIVIGDKKFEFLAFSASQLRSNSV 1590
            W ++S  A+S++ K   F KP+RT+IY R+LS+L +GI +G K+FEFLAFSASQLR NSV
Sbjct: 457  WSKLSANALSVNSKDGYFVKPFRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSV 516

Query: 1591 WMFASNDHIKAEDIREWMGCFNKIRSISKCAARMGQLFSSSIQTLEVHPRDIDHIPDIEV 1770
            WMFASN  +KAEDIREWMGCF KIRSISKCAARMGQLFS+S QTL V  +D++ IPDIEV
Sbjct: 517  WMFASNKKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLNVRAQDVEQIPDIEV 576

Query: 1771 VSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQIRYGGYKGVIVVDRQSFRKLAL 1950
             +DG  YCFSDGIGKIS AFAK + +K GL ++PSAFQIRYGGYKGVI VDR SFRK++L
Sbjct: 577  TTDGADYCFSDGIGKISLAFAKQVAQKCGLDYVPSAFQIRYGGYKGVIAVDRSSFRKMSL 636

Query: 1951 RSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLGVEDSVFLAMQDEQLQTLGRIL 2130
            R SMLKFDSNN MLN+T+W+ES PC+LNREII LLSTLG+ED+VF AMQ   L  LG +L
Sbjct: 637  RDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAVFEAMQAMHLSMLGNML 696

Query: 2131 TKTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKNEPYLSRVLQSHLENQLADLRSRGRIF 2310
                AA+NVL+   G   K +L+ MLL GY P +EPYLS +L+ H E+QL++L+SR RI 
Sbjct: 697  EDRNAALNVLQKLSGENSKNLLVDMLLHGYAPSSEPYLSMMLRVHHESQLSELKSRCRIL 756

Query: 2311 VPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQCGGNQRFFRRVDENTSXXXXXXXXXX 2490
            VPKGR+L+GC+DE GILEYGQVYVRVT+ KAE++    Q +F+++DE TS          
Sbjct: 757  VPKGRILIGCMDEMGILEYGQVYVRVTLTKAELK-SREQSYFKKIDEETSVVIGKVVVTK 815

Query: 2491 NPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDDN 2670
            NPCLHPGD+RVL+A+++V  +E   +DC++FPQKG+RPHPNECSGGDLDGD +F+SWD+ 
Sbjct: 816  NPCLHPGDIRVLDAIYEVNFEEKGFLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEK 875

Query: 2671 LIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFADYMISDTLGTISTAHLIHADREPDKA 2850
            LIP +   PMDY   RPRIMDHDVTLEEI KFF DYMISDTLG ISTAHLIHADR+P+KA
Sbjct: 876  LIPSQMDPPMDYAASRPRIMDHDVTLEEIHKFFVDYMISDTLGMISTAHLIHADRDPEKA 935

Query: 2851 LSSKCLELANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYVSHGALGKLYRA 3030
             S KCLELANLHS AVDFAKTGAPAEMP ALKPREFPDF+ER+EKP Y+S    GKLYRA
Sbjct: 936  RSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRA 995

Query: 3031 TVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAE 3210
                + Q K  A+  D   + AYD  L   G++SF++TA+ H++ Y +++ +L+ YYGA 
Sbjct: 996  VKSSLAQKKPEAETED---TTAYDSTLEEAGFESFIETAKIHRDMYAEKLTSLMTYYGAV 1052

Query: 3211 SEVEILTGNLQKK 3249
            +E EILTG L+ K
Sbjct: 1053 NEEEILTGILKTK 1065