BLASTX nr result

ID: Rehmannia23_contig00003300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00003300
         (1006 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...    94   6e-17
gb|AFK42470.1| unknown [Lotus japonicus]                               87   1e-14
gb|EOY30217.1| Photosystem I light harvesting complex gene 6 iso...    83   1e-13
gb|EOY30216.1| Photosystem I light harvesting complex gene 6 iso...    83   1e-13
gb|ESW10631.1| hypothetical protein PHAVU_009G225500g [Phaseolus...    82   3e-13
ref|XP_006474703.1| PREDICTED: chlorophyll a-b binding protein, ...    79   2e-12
ref|XP_006474702.1| PREDICTED: chlorophyll a-b binding protein, ...    79   2e-12
ref|XP_006474704.1| PREDICTED: chlorophyll a-b binding protein, ...    77   8e-12
ref|NP_001276216.1| chlorophyll a-b binding protein, chloroplast...    77   8e-12
gb|EMJ03650.1| hypothetical protein PRUPE_ppa010035mg [Prunus pe...    75   3e-11
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...    75   3e-11
gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]       75   3e-11
ref|XP_006452840.1| hypothetical protein CICLE_v10009205mg [Citr...    75   4e-11
ref|XP_006452839.1| hypothetical protein CICLE_v10009205mg [Citr...    75   4e-11
emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]    75   5e-11
ref|XP_006345258.1| PREDICTED: chlorophyll a-b binding protein, ...    74   7e-11
ref|XP_004488100.1| PREDICTED: chlorophyll a-b binding protein 7...    74   7e-11
ref|XP_004488099.1| PREDICTED: chlorophyll a-b binding protein 7...    74   7e-11
ref|XP_004251698.1| PREDICTED: chlorophyll a-b binding protein, ...    74   9e-11
ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, ...    74   9e-11

>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RE+  K  FPRK+ TWLP R  LNATKG SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  REVSSKH-FPRKLTTWLPGRVRLNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 69


>gb|AFK42470.1| unknown [Lotus japonicus]
          Length = 259

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 36/48 (75%), Positives = 40/48 (83%)
 Frame = -2

Query: 729 LFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           +FP + ATWLP+R   NA KG S VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 22  VFPERTATWLPRRIHTNAKKGVSDVCEPLPPDRPLWFPGSSPPEWLDG 69


>gb|EOY30217.1| Photosystem I light harvesting complex gene 6 isoform 2 [Theobroma
           cacao]
          Length = 263

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R+ P K  FP KI T+LP    L ATKG SSVC+PLPPDRPLWFPGS+PPEWLDG
Sbjct: 16  RDRPQKP-FPGKITTFLPGSTHLRATKGVSSVCEPLPPDRPLWFPGSTPPEWLDG 69


>gb|EOY30216.1| Photosystem I light harvesting complex gene 6 isoform 1 [Theobroma
           cacao]
          Length = 259

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R+ P K  FP KI T+LP    L ATKG SSVC+PLPPDRPLWFPGS+PPEWLDG
Sbjct: 16  RDRPQKP-FPGKITTFLPGSTHLRATKGVSSVCEPLPPDRPLWFPGSTPPEWLDG 69


>gb|ESW10631.1| hypothetical protein PHAVU_009G225500g [Phaseolus vulgaris]
          Length = 261

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWL--PKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RE+  K   P +  TWL   +R   NATKG S+VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  REIRQKVNLPERTGTWLGLSRRTTANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDG 72


>ref|XP_006474703.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 271

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRG--VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGR 583
           R++P K  F  KI   L  RG  ++NATKG SSVC+PLPPDRPLWFPGS+PP WLDGR
Sbjct: 19  RDIPQKR-FTEKITKCLVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGSTPPSWLDGR 75


>ref|XP_006474702.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 272

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRG--VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGR 583
           R++P K  F  KI   L  RG  ++NATKG SSVC+PLPPDRPLWFPGS+PP WLDGR
Sbjct: 20  RDIPQKR-FTEKITKCLVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGSTPPSWLDGR 76


>ref|XP_006474704.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 265

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRG--VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R++P K  F  KI   L  RG  ++NATKG SSVC+PLPPDRPLWFPGS+PP WLDG
Sbjct: 20  RDIPQKR-FTEKITKCLVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGSTPPSWLDG 75


>ref|NP_001276216.1| chlorophyll a-b binding protein, chloroplastic-like [Glycine max]
           gi|255646839|gb|ACU23891.1| unknown [Glycine max]
          Length = 260

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLP--KRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RE+  K  FP +  T L   +R + NATKG S+VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  REIRQKG-FPERTPTCLSLTRRTIANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDG 71


>gb|EMJ03650.1| hypothetical protein PRUPE_ppa010035mg [Prunus persica]
          Length = 267

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 38/57 (66%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGV--LNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RE+P K   P K+   +  R    LNATKG SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 21  REVPRK-FCPGKLKPCMLGRRTTSLNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 76


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|566176341|ref|XP_006381597.1| chlorophyll A-B binding
           family protein [Populus trichocarpa]
           gi|550336304|gb|ERP59394.1| chlorophyll A-B binding
           family protein [Populus trichocarpa]
          Length = 261

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R+ P KSL   KI      +  +NATKG SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 18  RDKPQKSLLG-KIEKCQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 71


>gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 261

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R+ P KSL   KI      +  +NATKG SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 18  RDKPQKSLLG-KIEKCQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 71


>ref|XP_006452840.1| hypothetical protein CICLE_v10009205mg [Citrus clementina]
           gi|557556066|gb|ESR66080.1| hypothetical protein
           CICLE_v10009205mg [Citrus clementina]
          Length = 264

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRG--VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R++P K  F  KI   L  R   ++NATKG SSVC+PLPPDRPLWFPGS+PP WLDG
Sbjct: 19  RDIPQKC-FTEKITKCLVGRSGVIVNATKGVSSVCEPLPPDRPLWFPGSTPPSWLDG 74


>ref|XP_006452839.1| hypothetical protein CICLE_v10009205mg [Citrus clementina]
           gi|557556065|gb|ESR66079.1| hypothetical protein
           CICLE_v10009205mg [Citrus clementina]
          Length = 265

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRG--VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           R++P K  F  KI   L  R   ++NATKG SSVC+PLPPDRPLWFPGS+PP WLDG
Sbjct: 20  RDIPQKC-FTEKITKCLVGRSGVIVNATKGVSSVCEPLPPDRPLWFPGSTPPSWLDG 75


>emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
          Length = 229

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -2

Query: 684 LNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           LNATKG SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 7   LNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 39


>ref|XP_006345258.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Solanum tuberosum]
          Length = 260

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RELP K+   +     L K+  L A K  SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  RELPTKTFSGKFTTCVLSKKSRLYAGKEVSSVCEPLPPDRPLWFPGSSPPEWLDG 70


>ref|XP_004488100.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           isoform X2 [Cicer arietinum]
          Length = 264

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 3/44 (6%)
 Frame = -2

Query: 708 TWLPKRG---VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           +WL +R    + NATKG S VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 31  SWLSRRRSITIRNATKGVSDVCEPLPPDRPLWFPGSSPPEWLDG 74


>ref|XP_004488099.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           isoform X1 [Cicer arietinum]
          Length = 293

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 3/44 (6%)
 Frame = -2

Query: 708 TWLPKRG---VLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           +WL +R    + NATKG S VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 31  SWLSRRRSITIRNATKGVSDVCEPLPPDRPLWFPGSSPPEWLDG 74


>ref|XP_004251698.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
          Length = 260

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLPKRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RELP K+   +     L ++  L A K  SSVC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  RELPTKTFSGKFTTCMLSRKSRLYAGKEVSSVCEPLPPDRPLWFPGSSPPEWLDG 70


>ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 750 RELPGKSLFPRKIATWLP--KRGVLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDG 586
           RE+  K  FP +  T L   +R V  ATKG S+VC+PLPPDRPLWFPGSSPPEWLDG
Sbjct: 16  REIRQKG-FPDRTPTCLSLTRRTVAYATKGVSAVCEPLPPDRPLWFPGSSPPEWLDG 71


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