BLASTX nr result
ID: Rehmannia23_contig00003270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00003270
(403 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera] 103 3e-20
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 101 1e-19
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 98 1e-18
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 97 2e-18
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 96 6e-18
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 96 6e-18
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 96 6e-18
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 96 6e-18
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 96 6e-18
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 94 2e-17
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 94 2e-17
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 94 2e-17
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 93 3e-17
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 93 4e-17
emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera] 93 4e-17
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 92 5e-17
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 92 7e-17
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 92 7e-17
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 91 2e-16
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 91 2e-16
>emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]
Length = 1017
Score = 103 bits (256), Expect = 3e-20
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K PE ++ GK ++ +L++FGC +VHQ KL+PRS KC+FLGYPEGVKGYRLW + P
Sbjct: 146 KTPEELWFGKPSNYDHLRIFGCITYVHQSEGKLKPRSIKCIFLGYPEGVKGYRLWYKESP 205
Query: 218 GFKAITSRDVIFNESD 171
G K I SRDV+FNE++
Sbjct: 206 GVKIIISRDVMFNENE 221
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 101 bits (251), Expect = 1e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P+ ++GK D+ +LKVFGC A+VH + DKLEPR+ KC+FLGYP+GVKGY+LW+ +
Sbjct: 601 KTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQG 660
Query: 218 GFKAITSRDVIFNESD 171
K I SRDV FNE D
Sbjct: 661 KGKCIISRDVTFNEQD 676
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/83 (49%), Positives = 61/83 (73%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K PE +++ ++F NLKVFGC A+ HQ+ KL+PR+KKC+F+GYPEGVKGY+LW +
Sbjct: 98 KTPEEVWTDYPLNFENLKVFGCTAYAHQKEGKLDPRAKKCMFVGYPEGVKGYKLWCKYGN 157
Query: 218 GFKAITSRDVIFNESDFPCLSVT 150
K+ SRDV+F E+++ ++T
Sbjct: 158 TSKSFISRDVVFRETEYYMATMT 180
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/97 (47%), Positives = 63/97 (64%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P+ + GK ++ +LKVFGC +VH + DKLEPR+ KC+FLGYP+GVKGY+LW+ +
Sbjct: 209 KTPQEKWIGKAANYQHLKVFGCTTYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQG 268
Query: 218 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVE 108
K I SRDV FNE D + T + S+ +VE
Sbjct: 269 KRKCIISRDVTFNEQDMSKQTPTKYVEGSDQLQFEVE 305
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 678 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 737
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E EN+ +
Sbjct: 738 --KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENVAI 790
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 604 KTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK 663
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E EN+ +
Sbjct: 664 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENVAI 716
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/106 (45%), Positives = 66/106 (62%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K PE ++ GK ++ + ++FGC A+VHQ KLEPRS KC+FLGY EGVKGYRLW +
Sbjct: 313 KTPEELWFGKSSNYEHHRIFGCTAYVHQSEGKLEPRSIKCIFLGYLEGVKGYRLWNKESM 372
Query: 218 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLLGLSHID 81
G K I S DV+FNE++ LS+ + +E K +L H +
Sbjct: 373 GVKIIISHDVVFNENEM--LSMRTNTVGTEGDYEKRSLILYKDHFE 416
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 641 KTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK 700
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E EN+ +
Sbjct: 701 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENVAI 753
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 678 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 737
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E EN+ +
Sbjct: 738 --KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENVAI 790
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 93.6 bits (231), Expect = 2e-17
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 850 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 909
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E E++ +
Sbjct: 910 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKEDVAI 962
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 93.6 bits (231), Expect = 2e-17
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 643 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 702
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E E++ +
Sbjct: 703 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKEDVAI 755
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K E ++SGK ++ +L++FGC +VHQ KL RS KC+FLGYPEGVKGY+LW +
Sbjct: 330 KTLEELWSGKPSNYDHLRIFGCTTYVHQSEGKLVTRSIKCIFLGYPEGVKGYKLWNKESS 389
Query: 218 GFKAITSRDVIFNESD 171
G K I SRDV+FNE++
Sbjct: 390 GVKIIISRDVVFNENE 405
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/117 (41%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++S +++S+L+VFGC A+ H KLEPR+ KC+FLGYP G+KGY+LW
Sbjct: 425 KTPIEVWSDSPVNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGMKGYKLWCPKTK 484
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E EN+ +
Sbjct: 485 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENVAI 537
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 92.8 bits (229), Expect = 4e-17
Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+LKVFGC A+ H KLEPR+ KC+FLGYP GVK Y+LW
Sbjct: 582 KTPIEMWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWCPETQ 641
Query: 218 GFKAITSRDVIFNESDF--PCLSVTVSLPESEPAPNKVEQLLGLSHIDETENL 66
K + SR+VIFNE+ S V + + A +VE L+ H+ E EN+
Sbjct: 642 --KVVISRNVIFNETVMLNDKSSTNVPVKSQQKASVQVEHLISSVHVPEKENI 692
>emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]
Length = 807
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P+ ++GK +D+ LKVF A+VH + DKLEP KC+FLGYP+GVKGY+LW+ +
Sbjct: 388 KTPQEKWTGKVVDYQYLKVFRSTAYVHTKTDKLEPWVVKCIFLGYPKGVKGYKLWIETQG 447
Query: 218 GFKAITSRDVIFNESDFP 165
K I SRDV FNE D P
Sbjct: 448 KGKCIISRDVTFNEQDMP 465
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 92.4 bits (228), Expect = 5e-17
Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+LKVFGC A+ H KLEPR+ KC+FLGYP VKGY+LW
Sbjct: 642 KTPIEVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETK 701
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E E++ +
Sbjct: 702 --KVVISRNVVFHESIMLHDKP--STNVPVESQEKASVQVEHLINSGHAPEKEDVAI 754
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 92.0 bits (227), Expect = 7e-17
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 678 KTPIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 737
Query: 218 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLLGLSHIDETENLHV 60
K + SR+V+F+ES D P S V + E A +VE L+ H E E++ +
Sbjct: 738 --KVVISRNVVFHESVMLYDNP--STNVPVESQEKASVQVEHLISSGHALEKEDVAI 790
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/69 (55%), Positives = 54/69 (78%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P+ ++GK +D+ +LKVFGC A+VH + DKLEPR+ KC+FLGYP+GVKGY+LW++ +
Sbjct: 635 KTPQEKWTGKVVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIKTQG 694
Query: 218 GFKAITSRD 192
K I S+D
Sbjct: 695 KEKCIISKD 703
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 90.9 bits (224), Expect = 2e-16
Identities = 54/115 (46%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 635 KTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 693
Query: 218 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLLGL--SHIDETENLHV 60
G K SR V+FNES + T SLP SE P K Q + + H+D+ + V
Sbjct: 694 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDDTGVQV 742
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 90.9 bits (224), Expect = 2e-16
Identities = 54/115 (46%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = -3
Query: 398 KCPESIFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 219
K P ++SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 635 KTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 693
Query: 218 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLLGL--SHIDETENLHV 60
G K SR V+FNES + T SLP SE P K Q + + H+D+ + V
Sbjct: 694 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDDTGVQV 742