BLASTX nr result
ID: Rehmannia23_contig00001649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00001649
(967 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003623662.1| hypothetical protein MTR_7g074180 [Medicago ... 43 7e-12
ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago ... 42 7e-11
ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding sub... 40 6e-10
ref|XP_003599747.1| hypothetical protein MTR_3g044480 [Medicago ... 41 1e-06
ref|XP_003605116.1| hypothetical protein MTR_4g024160 [Medicago ... 41 1e-06
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula] 42 5e-06
>ref|XP_003623662.1| hypothetical protein MTR_7g074180 [Medicago truncatula]
gi|355498677|gb|AES79880.1| hypothetical protein
MTR_7g074180 [Medicago truncatula]
Length = 326
Score = 42.7 bits (99), Expect(4) = 7e-12
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = -3
Query: 839 GDRIHGTIRKSHIEQFKKLFHEGRVYMIREFIAVNFTDKYKTAAGKYKILFHGKTNVFEM 660
G RIH T RK + +F+ + EG Y + I YK + K+K+ + ++
Sbjct: 51 GGRIHATARKDLVAKFRCMVQEGGTYQLENAIVGFNESHYKATSNKHKLSMMHNSTFTKV 110
Query: 659 FYKAFPKFMYILKEFKEL--ARVENVDEAML 573
A P ++ K F E+ + VE V A++
Sbjct: 111 HSPAIPMNVFEFKPFNEILSSTVEEVSTAVI 141
Score = 40.8 bits (94), Expect(4) = 7e-12
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDHGFE-PIIVILQMCRAKIFRG 179
NNR+ C+LW ++ D I+ + +H + P I+ILQ C+ +++ G
Sbjct: 172 NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLG 214
Score = 27.7 bits (60), Expect(4) = 7e-12
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 480 TDIIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
T +I V+ + E GR R ID+TLEDLE
Sbjct: 138 TAVIGHVIERGDIRETEKDGRKSRVIDLTLEDLE 171
Score = 25.0 bits (53), Expect(4) = 7e-12
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 102 VTNSFHVTKMIVNGDDEEIQELRKR 28
V N+F+ TK+I+NGD ++ +R
Sbjct: 218 VANAFNGTKLILNGDLPDVAAYMRR 242
>ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago truncatula]
gi|355482375|gb|AES63578.1| hypothetical protein
MTR_2g010270 [Medicago truncatula]
Length = 315
Score = 42.0 bits (97), Expect(4) = 7e-11
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = -3
Query: 839 GDRIHGTIRKSHIEQFKKLFHEGRVYMIREFIAVNFTDKYKTAAGKYKILFHGKTNVFEM 660
G RIH T RK + +F+ + EG Y + + YK + K+K+ +N ++
Sbjct: 32 GGRIHATSRKDLVAKFRSMVQEGGTYQLENAMVGFNESPYKVTSHKHKLSMMHNSNFTKV 91
Query: 659 FYKAFPKFMYILKEFKELARVENVDEAMLFGTTLYSI 549
A P ++ K F E+ V+E T++ ++
Sbjct: 92 HSPAIPMNVFEFKPFNEILS-STVEEVSTDKTSILNV 127
Score = 40.4 bits (93), Expect(4) = 7e-11
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDHGFE-PIIVILQMCRAKIFRG 179
NNR+ C+LW ++ D I+ + +H + P I+ILQ C+ +++ G
Sbjct: 162 NNRLHCSLWGEHADKIVTFYGNHDNDTPTILILQFCKTRMYLG 204
Score = 26.2 bits (56), Expect(4) = 7e-11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 474 IIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
+I V+ + E GR R ID+TLEDLE
Sbjct: 130 VIGHVIERGDIRETEKDGRKNRVIDLTLEDLE 161
Score = 24.3 bits (51), Expect(4) = 7e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 102 VTNSFHVTKMIVNGDDEEI 46
V N+F+ TK+I+NGD ++
Sbjct: 208 VANAFNGTKLILNGDFPDV 226
>ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355480294|gb|AES61497.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 524
Score = 40.4 bits (93), Expect(4) = 6e-10
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDH-GFEPIIVILQMCRAKIFRG 179
NNR+ C+LW ++ D I+ + +H P+++ILQ C+ + + G
Sbjct: 172 NNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTRKYLG 214
Score = 37.4 bits (85), Expect(4) = 6e-10
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = -3
Query: 839 GDRIHGTIRKSHIEQFKKLFHEGRVYMIREFIAVNFTDKYKTAAGKYKILFHGKTNVFEM 660
G RIH T+RK + +F+ + EG Y + I YK + K+K+ ++ +
Sbjct: 51 GGRIHATVRKDLVARFRSMVEEGATYELHNAIVAINEGPYKITSHKHKLGMLHNSSFTKK 110
Query: 659 FYKAFPKFMYILKEFKELARVENVDE 582
P ++ F E+ NV+E
Sbjct: 111 DLPTIPINVFDFMSFNEILS-SNVEE 135
Score = 26.6 bits (57), Expect(4) = 6e-10
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 477 DIIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
D+I V+ + E GR + ID+TL+DLE
Sbjct: 139 DVIGHVIERGDVKETENEGRKSKVIDLTLQDLE 171
Score = 25.0 bits (53), Expect(4) = 6e-10
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 102 VTNSFHVTKMIVNGDDEEI 46
+ N+F+ TK+I+NGD E+
Sbjct: 218 IVNAFYGTKLILNGDLPEV 236
>ref|XP_003599747.1| hypothetical protein MTR_3g044480 [Medicago truncatula]
gi|355488795|gb|AES69998.1| hypothetical protein
MTR_3g044480 [Medicago truncatula]
Length = 248
Score = 40.8 bits (94), Expect(3) = 1e-06
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDHGFE-PIIVILQMCRAKIF 185
NNR+ C+LW ++ D I+ + ++H + P I+ILQ C+ +++
Sbjct: 128 NNRLHCSLWGEHADKIVSFFDNHDNDTPTILILQFCKTRMY 168
Score = 32.3 bits (72), Expect(3) = 1e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 480 TDIIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
TD+I+ V+ + E GR R ID+TLEDLE
Sbjct: 94 TDVIDHVIERGDIRETEKDGRKSRVIDLTLEDLE 127
Score = 26.2 bits (56), Expect(3) = 1e-06
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 117 IDEVKVTNSFHVTKMIVNGD 58
+D + V N+F+ TK+I+NGD
Sbjct: 169 LDAMGVANAFNGTKLILNGD 188
>ref|XP_003605116.1| hypothetical protein MTR_4g024160 [Medicago truncatula]
gi|355506171|gb|AES87313.1| hypothetical protein
MTR_4g024160 [Medicago truncatula]
Length = 234
Score = 40.8 bits (94), Expect(3) = 1e-06
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDHGFE-PIIVILQMCRAKIF 185
NNR+ C+LW ++ D I+ + ++H + P I+ILQ C+ +++
Sbjct: 128 NNRLHCSLWGEHADKIVSFFDNHDNDTPTILILQFCKTRMY 168
Score = 32.3 bits (72), Expect(3) = 1e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 480 TDIIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
TD+I+ V+ + E GR R ID+TLEDLE
Sbjct: 94 TDVIDHVIERGDIRETEKDGRKSRVIDLTLEDLE 127
Score = 26.2 bits (56), Expect(3) = 1e-06
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 117 IDEVKVTNSFHVTKMIVNGD 58
+D + V N+F+ TK+I+NGD
Sbjct: 169 LDAMGVANAFNGTKLILNGD 188
>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
Length = 327
Score = 42.4 bits (98), Expect(3) = 5e-06
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -1
Query: 304 NNRITCTLWEDYVDTILPYLEDHGFE-PIIVILQMCRAKIFRG 179
NNR+ C+LW ++VD I+ + +H + P I+ILQ C+ +++ G
Sbjct: 173 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 215
Score = 30.8 bits (68), Expect(3) = 5e-06
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 480 TDIIEKVVSMQCAQTKEIGGRTIRFIDITLEDLE 379
TD+I V+ + E GR R ID+TLEDLE
Sbjct: 139 TDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLE 172
Score = 23.9 bits (50), Expect(3) = 5e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 102 VTNSFHVTKMIVNGD 58
V N+F+ TK+I+NGD
Sbjct: 219 VANAFNGTKLILNGD 233