BLASTX nr result
ID: Rehmannia23_contig00000696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000696
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 167 2e-39
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 164 1e-38
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 161 9e-38
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana] 158 6e-37
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 157 1e-36
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 157 1e-36
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 157 1e-36
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 157 2e-36
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 156 2e-36
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 155 4e-36
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 155 7e-36
emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera] 154 2e-35
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar... 152 4e-35
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 152 6e-35
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 151 8e-35
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 149 5e-34
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 147 1e-33
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 146 3e-33
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 144 1e-32
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 143 3e-32
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 167 bits (422), Expect = 2e-39
Identities = 87/177 (49%), Positives = 115/177 (64%), Gaps = 14/177 (7%)
Frame = +1
Query: 1 ENEPENEN-----------LHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSE 147
E EPE N L +YQL +DR RR I PARF + +F V +S+ E
Sbjct: 457 EQEPETVNETDPTVESEGSLANYQLAKDRVRRQINPPARFTEESGVAFALVVVESLSLEE 516
Query: 148 PKSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---EC 318
P+SY+EA + K W NA +EEM+SL N TW LV KP N ++ C+WLFK+K+
Sbjct: 517 PESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGV 576
Query: 319 ESVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
E VRFKARLVAKG+TQ+EG+DY EIFAPVVK T++R+++++ + EL+QMDVKTA
Sbjct: 577 EPVRFKARLVAKGYTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTA 633
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 164 bits (414), Expect = 1e-38
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSK 180
+NEP + L Y LVRDR +R ++ P R+ MT+F SV + I + EPK+Y+EA+ S
Sbjct: 723 QNEP-TQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSN 781
Query: 181 NSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ESVRFKARLVA 351
+ W+ A+ EEM+SL N TW LV KP + VV KW+FK K E+ R+KARLVA
Sbjct: 782 EADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVA 841
Query: 352 KGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
KGF+QKEG+DY EIF+PVVK +++R++LA A + EL Q+DVKTA
Sbjct: 842 KGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQLDVKTA 887
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 161 bits (407), Expect = 9e-38
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 5/164 (3%)
Frame = +1
Query: 13 ENE-NLHDYQLVRDRARR-NIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNS 186
ENE +L DY L RD RR NIR P+RF+D ++ + + ++ EPKSYEEALKS
Sbjct: 686 ENEQSLDDYLLARDMKRRSNIRPPSRFEDEDFVAYALATAEDLEEEEPKSYEEALKSSKR 745
Query: 187 ADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKG 357
W NAM EEM+S ++TW L+ KP ++ CKW+FK+K E R+KARLVAKG
Sbjct: 746 KQWENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKG 805
Query: 358 FTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
F+Q+EGIDY E+F+ VVK ++R+ML+L ++EL+QMDVKTA
Sbjct: 806 FSQQEGIDYNEVFSLVVKHVSIRLMLSLMVNMDYELEQMDVKTA 849
>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
Length = 494
Score = 158 bits (400), Expect = 6e-37
Identities = 82/176 (46%), Positives = 114/176 (64%), Gaps = 13/176 (7%)
Frame = +1
Query: 1 ENEPENE----------NLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEP 150
E EPE + +L +YQL RDR RR I PARF + +F +++ EP
Sbjct: 12 EQEPEPQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETLSMEEP 71
Query: 151 KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECE 321
+SY+EA +K W A +EEM+SL N TW+LV KP + ++ C+WLFK+K+ E
Sbjct: 72 QSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE 131
Query: 322 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
VR+KARLVAKG+TQ+EG+DY EIFAPV K T++RI++++ + EL+QMDVKTA
Sbjct: 132 PVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTA 187
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 157 bits (398), Expect = 1e-36
Identities = 82/175 (46%), Positives = 112/175 (64%), Gaps = 13/175 (7%)
Frame = +1
Query: 1 ENEPENE----------NLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEP 150
E EPE + +L +YQLVRDR RR I PARF + +F +++ EP
Sbjct: 687 EQEPEPQVELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVTVETLSMEEP 746
Query: 151 KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECE 321
+SY+EA K W A +EE NSL N TW+LV KP + ++ C+WLFK+K+ E
Sbjct: 747 QSYQEATSDKEWKKWKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE 806
Query: 322 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKT 486
VR+KARLVAKG+TQ+EG+DY EIFAPV K T++RI++++ + EL+QMDVKT
Sbjct: 807 PVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKT 861
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 157 bits (398), Expect = 1e-36
Identities = 82/168 (48%), Positives = 110/168 (65%), Gaps = 5/168 (2%)
Frame = +1
Query: 1 ENEPENEN--LHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALK 174
E +P+ + L +YQL RD ARR+IR P RF M ++ S+ + + +EPK+Y EA+
Sbjct: 407 ETKPQQYDIPLENYQLTRDGARRSIRPPQRFGYNDMVAYSLSIGEELSCAEPKNYLEAIS 466
Query: 175 SKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARL 345
K+S W+ AM EE SL N TW LV KP C VV CKW+FK K E RFKA L
Sbjct: 467 CKDSPKWMTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATL 526
Query: 346 VAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
VAK +TQ+EG+D+ EIF+P+VK T++R++LAL + +N EL QMDV A
Sbjct: 527 VAKAYTQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRA 574
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 157 bits (398), Expect = 1e-36
Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 9/172 (5%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARFDDF------HMTSFVFSVFDSIDNSEPKSYE 162
E +P + + R RR IR+P R+ D + +F +V + I EP+SY+
Sbjct: 859 EEQPVIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYK 918
Query: 163 EALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ESVRF 333
EA++SK+S WL++M++EM SL N TW LVP P VDCKWLFK+K+ E ++
Sbjct: 919 EAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKY 978
Query: 334 KARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
K+RLVAKGF+QKEGIDY E+F+PVVK ++R++LA+ + FN EL Q+DVKTA
Sbjct: 979 KSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTA 1030
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 157 bits (396), Expect = 2e-36
Identities = 78/165 (47%), Positives = 110/165 (66%), Gaps = 3/165 (1%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSK 180
+ P+ L Y+L RDR RRNI P RF + +F V ++ EP+SY+EA++S+
Sbjct: 790 QETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAMESQ 849
Query: 181 NSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECESVRFKARLVA 351
+ W A ++EM+SL N TW LV KP + ++ C+WLFK+K+ E RFKARLVA
Sbjct: 850 DCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVA 909
Query: 352 KGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKT 486
KG+TQ+EG+DY EIFAPVVK ++RI+++L + EL+QMDVKT
Sbjct: 910 KGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKT 954
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 156 bits (395), Expect = 2e-36
Identities = 76/166 (45%), Positives = 111/166 (66%), Gaps = 4/166 (2%)
Frame = +1
Query: 4 NEPENENLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKN 183
+E +L +YQL RDR RR +R P R+ + ++ D + EP ++ EA++S +
Sbjct: 766 SELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVH 825
Query: 184 SADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNE----CESVRFKARLVA 351
WL AM +EM SL N TW L+P P N +++CKW+FK +NE E ++KARLVA
Sbjct: 826 CDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFK-RNEGIPDVEPPKYKARLVA 884
Query: 352 KGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
+GFTQ+EG+D+ EIF+PVVK +++RI+LA+ A + EL+QMDVKTA
Sbjct: 885 RGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTA 930
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 155 bits (393), Expect = 4e-36
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 13/176 (7%)
Frame = +1
Query: 1 ENEPENE----------NLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEP 150
E EPE + +L YQL +DR RR I PARF + +F +++ EP
Sbjct: 11 EQEPEPQVELPKTQTTSSLAYYQLAKDRERREIHPPARFTEESGVAFALVTVETLSMEEP 70
Query: 151 KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECE 321
+SY+EA K W A +EEM+SL N TW+LV KP + ++ C+WLFK+K+ E
Sbjct: 71 QSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFKMKSGIPGVE 130
Query: 322 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
VR+KARLVAKG+TQ+EG+DY EIFAPVVK T +RI++++ + EL+QMDVKTA
Sbjct: 131 PVRYKARLVAKGYTQREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQMDVKTA 186
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 155 bits (391), Expect = 7e-36
Identities = 81/176 (46%), Positives = 112/176 (63%), Gaps = 13/176 (7%)
Frame = +1
Query: 1 ENEPENE----------NLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEP 150
E EPE + +L +YQL RDR RR I PARF + +F +++ EP
Sbjct: 787 EQEPETQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETLSMEEP 846
Query: 151 KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECE 321
+SY+EA K W A +EEM+SL N TW+LV KP N ++ C+WLFK+K+ E
Sbjct: 847 QSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVE 906
Query: 322 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
VR+KA+LVAKG+T +EG+DY EIFA VVK T++RI++++ + EL+QMDVKTA
Sbjct: 907 PVRYKAQLVAKGYTHREGVDYQEIFALVVKHTSIRILMSVVVDQDLELEQMDVKTA 962
>emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]
Length = 444
Score = 154 bits (388), Expect = 2e-35
Identities = 82/167 (49%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
Frame = +1
Query: 1 ENEPENEN--LHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALK 174
E EP+ + L +YQL RDRAR++IR RF M + S+ + +EPK+Y E +
Sbjct: 140 EIEPQQYDIPLENYQLTRDRARKSIRPLQRFGYNDMVACSLSIGKELRCAEPKNYLETVS 199
Query: 175 SKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARL 345
K+S W+NAM EE SL N T +LV KP C VV CKW+FK K E RFKARL
Sbjct: 200 CKDSPKWMNAMQEEFESLFQNGTRLLVDKPKGCKVVGCKWVFKKKLGIPGVEPERFKARL 259
Query: 346 VAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKT 486
VAKG+TQ+EG+D+ EIF+P VK T++ ++LAL + +N E++QMDVKT
Sbjct: 260 VAKGYTQREGVDFNEIFSPAVKHTSIGVLLALVSLWNLEIEQMDVKT 306
>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 348
Score = 152 bits (384), Expect = 4e-35
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Frame = +1
Query: 13 ENE-NLHDYQLVRDRARR-NIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNS 186
ENE +L DY L R+R RR NIR P+RF D ++ + + ++ EPKSYEEA+K
Sbjct: 158 ENEQSLDDYLLARERKRRSNIRPPSRFKDGDFVAYALATEEDLEIEEPKSYEEAMKRSKR 217
Query: 187 ADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKG 357
W +AM EEM+S ++TW L+ KP ++ CKW+FK+K E R+K RLVAKG
Sbjct: 218 KQWESAMKEEMDSHQKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGLEKQRYKVRLVAKG 277
Query: 358 FTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
F+Q+EGIDY E+F+ VVK ++R+ML+L ++EL+QMDVKT+
Sbjct: 278 FSQQEGIDYNEVFSLVVKHVSIRLMLSLVVNMDYELEQMDVKTS 321
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 152 bits (383), Expect = 6e-35
Identities = 72/154 (46%), Positives = 105/154 (68%), Gaps = 4/154 (2%)
Frame = +1
Query: 40 LVRDRARR-NIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNSADWLNAMNEE 216
+ +DR RR +R P R+ M + V + +D SEP +Y+EA+ S +S W AM +E
Sbjct: 754 IAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDE 813
Query: 217 MNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKGFTQKEGIDYT 387
M SLH N TW LV +P+ ++ CKW+FK K + E V++KAR+VA+GF Q+EG+DY
Sbjct: 814 MESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYN 873
Query: 388 EIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
EIF+PVV+ T++R++LA+ A N EL+Q+DVKTA
Sbjct: 874 EIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTA 907
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 151 bits (382), Expect = 8e-35
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 5/168 (2%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARF--DDFHMTSFVFSVFDSIDNSEPKSYEEALK 174
E + +++ L +Y L RDR RR IR P RF +D + F ++ + + EP++YEEA++
Sbjct: 772 ETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVYEPETYEEAMR 831
Query: 175 SKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV---RFKARL 345
S W A EEM+S+ N+TW ++ KP V+ CKW+FK K V R+KARL
Sbjct: 832 SPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARL 891
Query: 346 VAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
VAKGF+Q+EGIDY EIF+PVVK ++R +L++ QF+ EL+Q+DVKTA
Sbjct: 892 VAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTA 939
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 149 bits (375), Expect = 5e-34
Identities = 79/166 (47%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSK 180
E+ E+L YQLVRDR RR I+ ++++ +M F + D EPKSY+EAL
Sbjct: 768 EDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSEDD-GKPEPKSYQEALLDP 826
Query: 181 NSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ESVRFKARLVA 351
+ W AM EEM S+ N+TW LV KP ++ C+W+F K E+ RF ARLVA
Sbjct: 827 DWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVA 886
Query: 352 KGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
KGFTQKEG+DY EIF+PVVK ++R +L++ +N EL+QMDVKTA
Sbjct: 887 KGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTA 932
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 147 bits (372), Expect = 1e-33
Identities = 77/166 (46%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 ENEPENENLHDYQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSK 180
E+ N++ Y LVRDR +R IR P RFDD + + + EP++Y +A
Sbjct: 788 EDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTEDGEAVEPENYRKAKLDA 847
Query: 181 NSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ESVRFKARLVA 351
N W AM+EE++S NNTW +V +P N ++ C+W+FK K E RFKARLVA
Sbjct: 848 NFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARLVA 907
Query: 352 KGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
KG+ QKEGIDY EIFAPVVK ++R++L++ AQ + EL+Q+DVKTA
Sbjct: 908 KGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTA 953
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 146 bits (368), Expect = 3e-33
Identities = 73/150 (48%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Frame = +1
Query: 49 DRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNSADWLNAMNEEMNSL 228
D+ +RN R+P + F V SI +P +YE+A++S SA W+ AM EEM SL
Sbjct: 751 DKPKRN-RKPIQRFGFEPEEDVSRAL-SISQGDPTTYEDAIESVESAGWIGAMTEEMESL 808
Query: 229 HVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKGFTQKEGIDYTEIFA 399
H N+ W LVPKP +V CKW+F+ K +E +++ +KARLVAKG++QKEG+DY EIF+
Sbjct: 809 HKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFS 868
Query: 400 PVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
PVVK T++R++L++ AQ++ E++QMDVKTA
Sbjct: 869 PVVKHTSIRLLLSIAAQYDMEIEQMDVKTA 898
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 144 bits (363), Expect = 1e-32
Identities = 75/155 (48%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Frame = +1
Query: 34 YQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNSADWLNAMNE 213
Y LVRDR RR IR P RFDD + + D EP Y+EA++ +N W AMNE
Sbjct: 806 YHLVRDRERREIRAPRRFDDEDYYAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNE 865
Query: 214 EMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV---RFKARLVAKGFTQKEGIDY 384
E+ S N+TW V +P ++ +W++K K V RFKARLVAKG+ Q+EG+DY
Sbjct: 866 EIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDY 925
Query: 385 TEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
EIFAPVVK ++RI+L++ AQ N EL+Q+DVKTA
Sbjct: 926 HEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTA 960
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 143 bits (360), Expect = 3e-32
Identities = 76/155 (49%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Frame = +1
Query: 34 YQLVRDRARRNIRQPARFDDFHMTSFVFSVFDSIDNSEPKSYEEALKSKNSADWLNAMNE 213
YQLVRDR RR IR P RFDD + + EP Y EA +S N W AMNE
Sbjct: 776 YQLVRDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNE 835
Query: 214 EMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKGFTQKEGIDY 384
EM S N+TW +V +P + V+ +W++K K E RFKARLVAKG+ Q++GIDY
Sbjct: 836 EMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDY 895
Query: 385 TEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTA 489
EIFAPVVK ++RI++++ AQ + EL+Q+DVKTA
Sbjct: 896 HEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTA 930