BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00000632
         (1050 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   395   e-107
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   386   e-105
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   386   e-105
ref|XP_002331405.1| predicted protein [Populus trichocarpa]           386   e-105
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   386   e-105
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   382   e-103
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       382   e-103
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        380   e-103
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   379   e-102
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   375   e-101
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]     371   e-100
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   369   1e-99
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   369   1e-99
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus...   369   1e-99
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe...   368   2e-99
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]     367   3e-99
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun...   361   3e-97
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   358   1e-96
gb|AFK45334.1| unknown [Medicago truncatula]                          356   7e-96

>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  395 bits (1015), Expect = e-107
 Identities = 209/352 (59%), Positives = 245/352 (69%), Gaps = 9/352 (2%)
 Frame = +3

Query: 3    VVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGK 182
            +VE   K E  +V   DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTVQGL+E SLG+
Sbjct: 84   IVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGR 143

Query: 183  FVDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAA 362
            FVD            P+EG   VAGRTDKGVTAL+QVCSFYTW+KDVK  DIEDAINGAA
Sbjct: 144  FVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAA 203

Query: 363  PGKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLD-SDVSGDGQC 539
            PGK+R ISVS+VSR FHPNFSAKWRHYFYIFP ND   D+  Q  +N +D   +S + + 
Sbjct: 204  PGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDG--DDGEQISENEMDIQKISFNEKY 261

Query: 540  GE--------HFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMF 695
            GE        + G EN+ + I D D  E  +  KP +F +SRV+QLL+QLEGKLLS+++F
Sbjct: 262  GEQGSECPAQYNGGENTENLIFD-DDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIF 320

Query: 696  ARDTKASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXX 875
            ARDTKASRNIGPPTECFVFHARA EA L  + DG  T+ MC+ELVANRFLRKMVRVLV  
Sbjct: 321  ARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVAT 380

Query: 876  XXXXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                         LLKLMD             DGLCL+DVG+TEF+ + C I
Sbjct: 381  SIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 432


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  386 bits (992), Expect = e-105
 Identities = 203/348 (58%), Positives = 231/348 (66%), Gaps = 13/348 (3%)
 Frame = +3

Query: 30   LVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXX 209
            L  V   D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+SLG+FVD      
Sbjct: 119  LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 178

Query: 210  XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISV 389
                  P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK  +IEDAIN  APGK+R  S+
Sbjct: 179  LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESI 238

Query: 390  SQVSREFHPNFSAKWRHYFYIFPFND-------------ENVDEASQCKKNVLDSDVSGD 530
            S+VSR FHPNFSAKWR Y YIFP ND             EN      C+K          
Sbjct: 239  SEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCEKQ--------R 290

Query: 531  GQCGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTK 710
             +CGE   EEN  + I   D+ E +   KP SF V RVNQLLQQLEGKLLS++MFARDTK
Sbjct: 291  NECGELASEENVENSIIS-DEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTK 349

Query: 711  ASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXX 890
            ASRN+GPPTECF++HARA E  L S       R MCVEL+ANRFLRKMVRVLV       
Sbjct: 350  ASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVATSVREA 409

Query: 891  XXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                    LLKLMD             DGLCLVDVGYTEF+ ++CLIP
Sbjct: 410  AAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 457


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  386 bits (992), Expect = e-105
 Identities = 203/348 (58%), Positives = 231/348 (66%), Gaps = 13/348 (3%)
 Frame = +3

Query: 30   LVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXX 209
            L  V   D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+SLG+FVD      
Sbjct: 110  LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 169

Query: 210  XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISV 389
                  P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK  +IEDAIN  APGK+R  S+
Sbjct: 170  LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESI 229

Query: 390  SQVSREFHPNFSAKWRHYFYIFPFND-------------ENVDEASQCKKNVLDSDVSGD 530
            S+VSR FHPNFSAKWR Y YIFP ND             EN      C+K          
Sbjct: 230  SEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCEKQ--------R 281

Query: 531  GQCGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTK 710
             +CGE   EEN  + I   D+ E +   KP SF V RVNQLLQQLEGKLLS++MFARDTK
Sbjct: 282  NECGELASEENVENSIIS-DEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTK 340

Query: 711  ASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXX 890
            ASRN+GPPTECF++HARA E  L S       R MCVEL+ANRFLRKMVRVLV       
Sbjct: 341  ASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVATSVREA 400

Query: 891  XXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                    LLKLMD             DGLCLVDVGYTEF+ ++CLIP
Sbjct: 401  AAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 448


>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
          Length = 428

 Score =  386 bits (992), Expect = e-105
 Identities = 203/348 (58%), Positives = 231/348 (66%), Gaps = 13/348 (3%)
 Frame = +3

Query: 30   LVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXX 209
            L  V   D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+SLG+FVD      
Sbjct: 90   LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 149

Query: 210  XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISV 389
                  P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK  +IEDAIN  APGK+R  S+
Sbjct: 150  LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESI 209

Query: 390  SQVSREFHPNFSAKWRHYFYIFPFND-------------ENVDEASQCKKNVLDSDVSGD 530
            S+VSR FHPNFSAKWR Y YIFP ND             EN      C+K          
Sbjct: 210  SEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCEKQ--------R 261

Query: 531  GQCGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTK 710
             +CGE   EEN  + I   D+ E +   KP SF V RVNQLLQQLEGKLLS++MFARDTK
Sbjct: 262  NECGELASEENVENSIIS-DEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTK 320

Query: 711  ASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXX 890
            ASRN+GPPTECF++HARA E  L S       R MCVEL+ANRFLRKMVRVLV       
Sbjct: 321  ASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVATSVREA 380

Query: 891  XXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                    LLKLMD             DGLCLVDVGYTEF+ ++CLIP
Sbjct: 381  AAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 428


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  386 bits (991), Expect = e-105
 Identities = 202/348 (58%), Positives = 245/348 (70%), Gaps = 6/348 (1%)
 Frame = +3

Query: 9    EDCGKPELVSVPAPDRT----GRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSL 176
            ED  K ELV++P  D++    GRWAR  F I+LSYHG SFDGWQKQP LNTVQGL+ERSL
Sbjct: 92   EDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSL 151

Query: 177  GKFVDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAING 356
            G+FVD            P+E CALVAGRTDKGV+A +QVCSFYTWRKDVK  D++ A++ 
Sbjct: 152  GEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDK 211

Query: 357  AAPGKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLD--SDVSGD 530
            AAPGKIR +S+++VSREFHPNFSAKWRHY YIFP +D  V    Q  +  +D  +DV   
Sbjct: 212  AAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDD--VLGEKQRGQIWIDGSTDVHQQ 269

Query: 531  GQCGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTK 710
             +CG+   ++++ +EI+D +  E   GNKP  FEV +VN+LL QLEGKLLS++MFARDTK
Sbjct: 270  NECGKSDIDKSNVNEIND-ENNELVHGNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTK 328

Query: 711  ASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXX 890
            ASRNIGPPTECFVFHARA E  +   KDG+  +TMC+ELVANRFLRKMVRVLV       
Sbjct: 329  ASRNIGPPTECFVFHARAIETSIPCAKDGSLMKTMCIELVANRFLRKMVRVLVATAIREA 388

Query: 891  XXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                    LLKLMD             DGLCLVDVGYT+++ + CLIP
Sbjct: 389  AAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  385 bits (990), Expect = e-104
 Identities = 202/343 (58%), Positives = 232/343 (67%)
 Frame = +3

Query: 3    VVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGK 182
            +VE   K E  +V   DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTVQGL+E SLG+
Sbjct: 84   IVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGR 143

Query: 183  FVDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAA 362
            FVD            P+EG   VAGRTDKGVTAL+QVCSFYTW+KDVK  DIEDAINGAA
Sbjct: 144  FVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAA 203

Query: 363  PGKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCG 542
            PGK+R ISVS+VSR FHPNFSAKWRHYFYIFP ND                   GD    
Sbjct: 204  PGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLND-------------------GDD--- 241

Query: 543  EHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRN 722
               GE+ S +E+D    +      KP +F +SRV+QLL+QLEGKLLS+++FARDTKASRN
Sbjct: 242  ---GEQISENEMDIQKISFNENRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRN 298

Query: 723  IGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXX 902
            IGPPTECFVFHARA EA L  + DG  T+ MC+ELVANRFLRKMVRVLV           
Sbjct: 299  IGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGA 358

Query: 903  XXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                LLKLMD             DGLCL+DVG+TEF+ + C I
Sbjct: 359  EQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 401


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  382 bits (982), Expect = e-103
 Identities = 204/349 (58%), Positives = 234/349 (67%), Gaps = 5/349 (1%)
 Frame = +3

Query: 3    VVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGK 182
            + ED  K EL      DR GRWARV F+I LSYHG SFDGWQKQPGLNTVQGL+E+SLGK
Sbjct: 96   IQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGK 155

Query: 183  FVDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAA 362
            FVD            P+EGCA+VAGRTDKGV+AL QVCSFYTWRKDV+  +IEDAIN +A
Sbjct: 156  FVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINSSA 215

Query: 363  PGKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNV--LDSDVSGDGQ 536
            PGKIR ISVS+VSR FHPNFSAKWR Y YIFP ND    E S   +++  L S    D Q
Sbjct: 216  PGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSYEKYDEQ 275

Query: 537  ---CGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDT 707
               C E   EE+  +E+   D+ E     KP  F + RVNQLLQQLEGKLLS+++FARDT
Sbjct: 276  RNGCAELTSEEHV-EELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKLLSYKIFARDT 334

Query: 708  KASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXX 887
            KASRN+GPPTECF++HARA EA L     G   + MCVELVANRFLRKMVRVLV      
Sbjct: 335  KASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMVRVLVATSIRE 394

Query: 888  XXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                     LLKLMD             DGLCL DVGYTEF+ + C++P
Sbjct: 395  AAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIVP 443


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  382 bits (981), Expect = e-103
 Identities = 202/333 (60%), Positives = 236/333 (70%), Gaps = 1/333 (0%)
 Frame = +3

Query: 36   SVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXXXX 215
            S+P   RTGRWAR+TF+I+LSYHG SFDGWQKQPGLNTVQGLIE SLG F+D        
Sbjct: 93   SLPNEQRTGRWARLTFKIILSYHGYSFDGWQKQPGLNTVQGLIENSLGVFIDEKKALQLK 152

Query: 216  XXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISVSQ 395
                P +GCA+VAGRTDKGV+AL QVCSFYTWRK+V+A DI +AIN +APGK+R  SVSQ
Sbjct: 153  EKNLPRDGCAVVAGRTDKGVSALGQVCSFYTWRKEVEAEDIMEAINDSAPGKLRVTSVSQ 212

Query: 396  VSREFHPNFSAKWRHYFYIFPFNDENVD-EASQCKKNVLDSDVSGDGQCGEHFGEENSGD 572
            VSREFHPNFSAKWR Y YIFP N E  D EA + +KN           CG++  ++ SG 
Sbjct: 213  VSREFHPNFSAKWRRYLYIFPLNHEYRDREAFKSEKNDF---------CGDNCLDDQSG- 262

Query: 573  EIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTECFVF 752
                      +TG KP++FEVSRV+QLL  LEGKLLSFRMFARDTKASR+IGPPTECF+F
Sbjct: 263  ---------MQTGCKPLNFEVSRVSQLLLHLEGKLLSFRMFARDTKASRSIGPPTECFIF 313

Query: 753  HARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMD 932
            HARAAEAYL  +++ T ++ MCVELVA+RFLRKMVRVLV               LL+LM 
Sbjct: 314  HARAAEAYLPCSEEETKSKIMCVELVADRFLRKMVRVLVATAIREAAAGADEDMLLQLMG 373

Query: 933  XXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                         DGLCLVDVGYTEF++K CLI
Sbjct: 374  ATCRRATAPPAPPDGLCLVDVGYTEFDRKVCLI 406


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  380 bits (975), Expect = e-103
 Identities = 196/327 (59%), Positives = 232/327 (70%)
 Frame = +3

Query: 51   DRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXXXXXXXXP 230
            +R+GRWAR TF+++L YHG SFDGWQKQPGLNTVQGL+ERSLG+FVD            P
Sbjct: 119  ERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLP 178

Query: 231  IEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISVSQVSREF 410
            +E C +VAGRTDKGVTAL+QVCSFYTWRKD+   DIE+AIN AA GK++A SVS+VSR F
Sbjct: 179  LEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVF 238

Query: 411  HPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGEENSGDEIDDYD 590
            HPNFSAKWR Y YIFPFNDE  +E S      L++    +  CGE + +E+ G+ I D D
Sbjct: 239  HPNFSAKWRRYLYIFPFNDEEDEEQSNKNGENLETYEKIESGCGE-WNDESFGNLIID-D 296

Query: 591  QTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTECFVFHARAAE 770
              E  +G KP SF VSRV+QLL+ LEGKLLS++MFARDTKASRN GPPTECF++HARAAE
Sbjct: 297  SEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAE 356

Query: 771  AYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXX 950
            A L ++      + MCVELVANRFLRKMVRVLV               LLKLMD      
Sbjct: 357  ARLPTSDCTEGRKIMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRA 416

Query: 951  XXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                   DGLCLVDVGY+EF+  +CLI
Sbjct: 417  TAPPAPPDGLCLVDVGYSEFKPNNCLI 443


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  379 bits (972), Expect = e-102
 Identities = 198/347 (57%), Positives = 244/347 (70%), Gaps = 5/347 (1%)
 Frame = +3

Query: 9    EDCGKPELVSVPAPDRT----GRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSL 176
            ED  K ELV++P  D++    GRWAR  F I+LSYHG SFDGWQKQP LNTVQGL+ERSL
Sbjct: 92   EDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSL 151

Query: 177  GKFVDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAING 356
            G+FVD            P+E CALVAGRTDKGV+A +QVCSFYTWRKDVK  D++ A++ 
Sbjct: 152  GEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDK 211

Query: 357  AAPGKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDS-DVSGDG 533
            AAPGKIR +S+++VSREFHPNFSAKWRHY YIFP  D+ + E    +  + DS +V    
Sbjct: 212  AAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPI-DDVLGEKQGGQIWIDDSTNVHQQN 270

Query: 534  QCGEHFGEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKA 713
            +C +   ++++ +EI++ +  +   GNKP  FEV +VN+LL QLEGKLLS++MFARDTKA
Sbjct: 271  ECDKSDVDKSNVNEINN-ENDKLVHGNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTKA 329

Query: 714  SRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXX 893
            SRNIGPPTECFVFHARA E  +   KDG+  +TMC+ELVANRFLRKMVRVLV        
Sbjct: 330  SRNIGPPTECFVFHARAIETSIPCAKDGSHMKTMCIELVANRFLRKMVRVLVATAIREAA 389

Query: 894  XXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLIP 1034
                   LLKLMD             DGLCLVDVGYT+++ + CLIP
Sbjct: 390  AGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  375 bits (964), Expect = e-101
 Identities = 196/338 (57%), Positives = 225/338 (66%)
 Frame = +3

Query: 18   GKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXX 197
            G  EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQ ++E SLGKFVD  
Sbjct: 118  GSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEK 177

Query: 198  XXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIR 377
                      PIEGCA+VAGRTDKGVT L+QVCSFYTW+KDVK  DIEDAIN AAPGK+R
Sbjct: 178  KTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINHAAPGKLR 237

Query: 378  AISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGE 557
             ISVS+VSR FHPNFSAKWR Y YIFP  +               +D S D   GE +  
Sbjct: 238  VISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGY------------TDQSSDN--GEFYDS 283

Query: 558  ENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPT 737
                +  D   + E     K  +F +S+VN+LL++LEGKLLS++MFARDTKASRN GPPT
Sbjct: 284  FKYNEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPT 343

Query: 738  ECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXL 917
            ECFV+HARA E  L +T  G  T+ MCVELVANRFLRKMVRVLV               L
Sbjct: 344  ECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDAL 403

Query: 918  LKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            +KLMD             DGLCLVDVGYTEFE + C I
Sbjct: 404  IKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441


>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
          Length = 444

 Score =  371 bits (953), Expect = e-100
 Identities = 192/348 (55%), Positives = 236/348 (67%), Gaps = 6/348 (1%)
 Frame = +3

Query: 6    VEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKF 185
            + D  +   VS    +R+GRW RVTF+I++SY+G +FDGWQKQPGLNTVQ ++ERSLG+F
Sbjct: 97   IHDDSETVEVSDEKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRF 156

Query: 186  VDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAP 365
            VD            P+EGCA+VAGRTDKGV+A+ QVCSFYTWRKDVK  DIEDAIN  AP
Sbjct: 157  VDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAP 216

Query: 366  GKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGE 545
            GK+R +SVS+VSR FHPNFSAKWRHY YIFP +++ +++ S   K  +++ +S DG   E
Sbjct: 217  GKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFIS-DGNYNE 275

Query: 546  H---FGEENSGDEIDDY---DQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDT 707
                + E    + +++    D       NKP  F V RVNQLLQQLE KLLS++MFARDT
Sbjct: 276  QRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDT 335

Query: 708  KASRNIGPPTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXX 887
            KASRNIGPPTECF++HARAAEA +  +  G     MCVELVANRFLRKMVRVLV      
Sbjct: 336  KASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVANRFLRKMVRVLVATSIRE 395

Query: 888  XXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                     LLKLM              DGLCLVDVGYTEF+ ++CL+
Sbjct: 396  AAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 443


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  369 bits (947), Expect = 1e-99
 Identities = 197/340 (57%), Positives = 229/340 (67%), Gaps = 5/340 (1%)
 Frame = +3

Query: 27   ELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXX 206
            EL      D+TGRWAR TF+I+LSY GNSFDGWQKQPGLNTVQGL+ERSLGKFVD     
Sbjct: 102  ELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQ 161

Query: 207  XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAIS 386
                   P+EGCALVAGRTDKGVTAL QVCSFYTWR DVK  DIED+IN AAPGK+R  S
Sbjct: 162  MLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSS 221

Query: 387  VSQVSREFHPNFSAKWRHYFYIFPFND-ENVDEASQCKKNVLDSD----VSGDGQCGEHF 551
            VSQVSR FHPNFSAKWR Y YI P ND EN++  S   +NV + +    V  +   GE  
Sbjct: 222  VSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKC 281

Query: 552  GEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGP 731
             +    + +   +  E  + +KP +F ++RVNQLL++LEGKLLS++MFARDTKASRN GP
Sbjct: 282  VDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGP 341

Query: 732  PTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 911
            PTECFV+HARAAE  L   + G     MCVELVANRFLRKMVRVLV              
Sbjct: 342  PTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGED 401

Query: 912  XLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
             LL+LMD             DGL LVDVGYT+F+ + C I
Sbjct: 402  ALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  369 bits (947), Expect = 1e-99
 Identities = 197/340 (57%), Positives = 229/340 (67%), Gaps = 5/340 (1%)
 Frame = +3

Query: 27   ELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXX 206
            EL      D+TGRWAR TF+I+LSY GNSFDGWQKQPGLNTVQGL+ERSLGKFVD     
Sbjct: 102  ELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQ 161

Query: 207  XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAIS 386
                   P+EGCALVAGRTDKGVTAL QVCSFYTWR DVK  DIED+IN AAPGK+R  S
Sbjct: 162  MLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSS 221

Query: 387  VSQVSREFHPNFSAKWRHYFYIFPFND-ENVDEASQCKKNVLDSD----VSGDGQCGEHF 551
            VSQVSR FHPNFSAKWR Y YI P ND EN++  S   +NV + +    V  +   GE  
Sbjct: 222  VSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKC 281

Query: 552  GEENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGP 731
             +    + +   +  E  + +KP +F ++RVNQLL++LEGKLLS++MFARDTKASRN GP
Sbjct: 282  VDGIHDNLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGP 341

Query: 732  PTECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 911
            PTECFV+HARAAE  L   + G     MCVELVANRFLRKMVRVLV              
Sbjct: 342  PTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGED 401

Query: 912  XLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
             LL+LMD             DGL LVDVGYT+F+ + C I
Sbjct: 402  ALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  369 bits (946), Expect = 1e-99
 Identities = 197/335 (58%), Positives = 224/335 (66%)
 Frame = +3

Query: 27   ELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXX 206
            EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQG++E SLGKFVD     
Sbjct: 118  ELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVDEKKTQ 177

Query: 207  XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAIS 386
                   PIEGCA+VAGRTDKGVT L+QVCSFYTW+KDVK  DIEDAIN AA GK+R IS
Sbjct: 178  LLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAALGKLRVIS 237

Query: 387  VSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGEENS 566
            VS+VSR FHPNFSAKWRHY YIFP  +   D   Q   N    D+S        + E + 
Sbjct: 238  VSEVSRVFHPNFSAKWRHYLYIFPLTNGYRD---QSNSNGESCDIS-------KYNEMHD 287

Query: 567  GDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTECF 746
                D  +  E     K   F VS+VN LL++LEGKLLS++MFARDTKASRN GPPTECF
Sbjct: 288  SSSKDGIENQE-----KSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKASRNDGPPTECF 342

Query: 747  VFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKL 926
            V+HARA E  L +T  G  T+ MCVELVANRFLRKMVRVLV               L+KL
Sbjct: 343  VYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKL 402

Query: 927  MDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            MD             DGLCLVDVGYTEF+ + C I
Sbjct: 403  MDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437


>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  368 bits (945), Expect = 2e-99
 Identities = 191/339 (56%), Positives = 233/339 (68%), Gaps = 9/339 (2%)
 Frame = +3

Query: 42   PAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXXXXXXX 221
            P+ D+ GRWAR+TF+I++SYHG SFDGWQ+QPGLNTVQ ++E+SLGKFVD          
Sbjct: 74   PSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGKFVDERKAQMLKDK 133

Query: 222  XXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAISVSQVS 401
              P+EG ALVAGRTDKGVTA+ QVCSFYTWRKDVK+ DI DAIN AAPGK+R +SV++VS
Sbjct: 134  GLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAINSAAPGKLRVVSVTEVS 193

Query: 402  REFHPNFSAKWRHYFYIFPFND-ENVDEASQCKKNVLD--------SDVSGDGQCGEHFG 554
            R FHPNF+AKWRHY YIFPFND E++++++Q  +N  +           +G  QC     
Sbjct: 194  RAFHPNFTAKWRHYLYIFPFNDEEDMEQSNQSGENAQNFKSLENYHEHKNGCDQC----N 249

Query: 555  EENSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPP 734
            E N G+ +   +  E     KP  F VSRVNQLLQ+LEGKLLS++MFARDTK SRN GPP
Sbjct: 250  EANVGNLV--INDNEDLETLKPREFTVSRVNQLLQKLEGKLLSYKMFARDTKPSRNEGPP 307

Query: 735  TECFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXX 914
            TECF++HARA E+ L  ++     R MC+ELVANRFLR+MVRVLV               
Sbjct: 308  TECFLYHARAKESKLPCSEHEKGRRVMCIELVANRFLRRMVRVLVATSIREAAAGADEDA 367

Query: 915  LLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            LLKLMD             DGLCLVDVGY EF+ + CLI
Sbjct: 368  LLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406


>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
          Length = 446

 Score =  367 bits (943), Expect = 3e-99
 Identities = 194/350 (55%), Positives = 237/350 (67%), Gaps = 8/350 (2%)
 Frame = +3

Query: 6    VEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKF 185
            + D  +   VS    +R+GRW RVTF+I++SY+G +FDGWQKQPGLNTVQ ++ERSLG+F
Sbjct: 97   IHDDSETVEVSDEKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRF 156

Query: 186  VDXXXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAP 365
            VD            P+EGCA+VAGRTDKGV+A+ QVCSFYTWRKDVK  DIEDAIN  AP
Sbjct: 157  VDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAP 216

Query: 366  GKIRAISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGE 545
            GK+R +SVS+VSR FHPNFSAKWRHY YIFP +++ +++ S   K  +++ +S DG   E
Sbjct: 217  GKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFIS-DGNYNE 275

Query: 546  H---FGEENSGDEIDDY---DQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDT 707
                + E    + +++    D       NKP  F V RVNQLLQQLE KLLS++MFARDT
Sbjct: 276  QRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDT 335

Query: 708  KASRNIGPPTECFVFHARAAEAYL-LSTKD-GTSTRTMCVELVANRFLRKMVRVLVXXXX 881
            KASRNIGPPTECF++HARAAEA +  S  D G     MCVELVANRFLRKMVRVLV    
Sbjct: 336  KASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLVATSI 395

Query: 882  XXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
                       LLKLM              DGLCLVDVGYTEF+ ++CL+
Sbjct: 396  REAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 445


>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
            gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase A
            [Medicago truncatula]
          Length = 400

 Score =  361 bits (926), Expect = 3e-97
 Identities = 191/335 (57%), Positives = 222/335 (66%)
 Frame = +3

Query: 27   ELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXX 206
            E  S  + DR+G+WAR  F+ILLSYHG SFDGWQKQP LNTVQ ++E SLGKFVD     
Sbjct: 77   EFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNLNTVQSVVEVSLGKFVDENKTQ 136

Query: 207  XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAIS 386
                   PI+GCA VAGRTDKGVTAL+QVCSFYTW+KD+K  +IEDAIN AAPGK+R +S
Sbjct: 137  LLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDIKPREIEDAINDAAPGKLRVVS 196

Query: 387  VSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGEENS 566
            V +VSR FHPNFSAKWR Y YIFP  D    + S            G+G+  + F     
Sbjct: 197  VYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQS-----------GGNGESCDSFIYNEI 245

Query: 567  GDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTECF 746
             D  D  D+ E+   NK   F V +VN+LLQ+LEGK+LS++MFARDTKASRN GPPTECF
Sbjct: 246  CDS-DSKDELEKE--NKSYVFGVRKVNRLLQKLEGKMLSYKMFARDTKASRNDGPPTECF 302

Query: 747  VFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKL 926
            V HARA EA L  T++G  TR MC+ELVANRFLRKMVRVLV               LLKL
Sbjct: 303  VHHARAMEAKLPITENGEETRVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLKL 362

Query: 927  MDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            MD             DGLCLVDVGY EFE++ C I
Sbjct: 363  MDATCRRATAPPAPPDGLCLVDVGYAEFEREKCFI 397


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  358 bits (920), Expect = 1e-96
 Identities = 191/337 (56%), Positives = 217/337 (64%)
 Frame = +3

Query: 21   KPELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXX 200
            K EL    + DR GRWAR+ F+I+LSYHG SFDGWQKQP LNTVQ ++E SLGKFVD   
Sbjct: 98   KTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEASLGKFVDEMK 157

Query: 201  XXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRA 380
                     PIEGCA VAGRTDKGVTAL+QVCSFYTW+KD+   DIEDAIN  APGK+R 
Sbjct: 158  TQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAINDGAPGKLRV 217

Query: 381  ISVSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGEE 560
            ISV +VSR FHPNFSAKWR Y YIFP  DE             D D SG  +  E     
Sbjct: 218  ISVHEVSRAFHPNFSAKWRRYLYIFPLTDEG------------DKDQSGSNE--ESCDRF 263

Query: 561  NSGDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTE 740
               +  D   + E     K   F V +VN+LLQ+LEGKLLS++MFARDTKASRN GPPTE
Sbjct: 264  IYNEVCDSVSKDELENEMKSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKASRNDGPPTE 323

Query: 741  CFVFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLL 920
            CFV+HARA EA L +T +G   R MC+ELVANRFLRKMVRVLV               LL
Sbjct: 324  CFVYHARAMEARLPTTDNG-EARVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALL 382

Query: 921  KLMDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            +LMD             DGLCLVDVGY EF++K C I
Sbjct: 383  RLMDATCRRATAPPAPPDGLCLVDVGYAEFDQKKCFI 419


>gb|AFK45334.1| unknown [Medicago truncatula]
          Length = 400

 Score =  356 bits (914), Expect = 7e-96
 Identities = 190/335 (56%), Positives = 221/335 (65%)
 Frame = +3

Query: 27   ELVSVPAPDRTGRWARVTFRILLSYHGNSFDGWQKQPGLNTVQGLIERSLGKFVDXXXXX 206
            E  S  + DR+G+WAR  F+ILLSYHG SFDGWQKQP LNTVQ ++E SLGKFVD     
Sbjct: 77   EFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNLNTVQSVVEVSLGKFVDENKTQ 136

Query: 207  XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKAMDIEDAINGAAPGKIRAIS 386
                   PI+GCA VAGRTDKGVTAL+QVCSFYTW+KD+K  +IEDAIN AAPGK+R +S
Sbjct: 137  LLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDIKPREIEDAINDAAPGKLRVVS 196

Query: 387  VSQVSREFHPNFSAKWRHYFYIFPFNDENVDEASQCKKNVLDSDVSGDGQCGEHFGEENS 566
            V +VSR FHPNFSAKWR Y YIFP  D    + S            G+G+  + F     
Sbjct: 197  VYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQS-----------GGNGESCDSFIYNEI 245

Query: 567  GDEIDDYDQTEQRTGNKPISFEVSRVNQLLQQLEGKLLSFRMFARDTKASRNIGPPTECF 746
             D  D  D+ E+   NK   F V +VN+LLQ+LEGK+LS++MFARDTKASRN GPPTECF
Sbjct: 246  CDS-DSKDELEKE--NKSYVFGVRKVNRLLQKLEGKMLSYKMFARDTKASRNDGPPTECF 302

Query: 747  VFHARAAEAYLLSTKDGTSTRTMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKL 926
            V HARA EA L  T++G  TR MC+ELVANRFLRKMVRVLV               LLKL
Sbjct: 303  VHHARAMEAKLPITENGEETRVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLKL 362

Query: 927  MDXXXXXXXXXXXXXDGLCLVDVGYTEFEKKSCLI 1031
            MD             DGL LVDVGY EFE++ C I
Sbjct: 363  MDATCRRATAPPAPPDGLGLVDVGYAEFEREKCFI 397