BLASTX nr result
ID: Rehmannia22_contig00021399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00021399
(432 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ... 112 5e-23
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 112 5e-23
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 111 1e-22
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 109 3e-22
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 107 2e-21
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 106 3e-21
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 105 5e-21
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 105 5e-21
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 104 1e-20
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ... 104 1e-20
ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495... 97 2e-18
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik... 97 2e-18
gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus... 96 4e-18
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A... 96 7e-18
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu... 95 9e-18
ref|XP_002304218.1| predicted protein [Populus trichocarpa] 95 9e-18
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis] 95 1e-17
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ... 95 1e-17
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ... 95 1e-17
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ... 95 1e-17
>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 914
Score = 112 bits (280), Expect = 5e-23
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVAVSELPHARIYP+R +VL SKALDDPKR VRQEAVRCRQAWASIA+RS
Sbjct: 852 VRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRS 911
Query: 185 LHF 193
LHF
Sbjct: 912 LHF 914
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 1147
Score = 112 bits (280), Expect = 5e-23
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVAVSELPHARIYP+R +VL SKALDDPKR VRQEAVRCRQAWASIA+RS
Sbjct: 1085 VRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRS 1144
Query: 185 LHF 193
LHF
Sbjct: 1145 LHF 1147
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 111 bits (277), Expect = 1e-22
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+S LPHARIYP+RT+VLR+ KALDDPKR VR EAVRCRQAWASIA+RS
Sbjct: 1084 VRETAIQCLVAMSRLPHARIYPMRTQVLRSVQKALDDPKRAVRHEAVRCRQAWASIASRS 1143
Query: 185 LHF 193
LHF
Sbjct: 1144 LHF 1146
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 109 bits (273), Expect = 3e-22
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
+RETA+QCLVA+SELPH RIYP+R +VL+A SKALDDPKR VRQEAVRCRQAWASIA+RS
Sbjct: 1112 IRETAVQCLVAMSELPHTRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRS 1171
Query: 185 LHF 193
LH+
Sbjct: 1172 LHY 1174
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 107 bits (266), Expect = 2e-21
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+S L +AR+YP+RT+VL+A +KALDDPKR VRQEAVRCRQAWASIA+RS
Sbjct: 1087 VRETAIQCLVAISGLSYARVYPMRTQVLQAIAKALDDPKRAVRQEAVRCRQAWASIASRS 1146
Query: 185 LHF 193
LHF
Sbjct: 1147 LHF 1149
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 106 bits (265), Expect = 3e-21
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+S+LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS A+RS
Sbjct: 1093 VRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDPKRAVRQEAVRCRQAWASTASRS 1152
Query: 185 LHF 193
L+F
Sbjct: 1153 LYF 1155
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 105 bits (263), Expect = 5e-21
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+S LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS A+RS
Sbjct: 1089 VRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWASTASRS 1148
Query: 185 LHF 193
L+F
Sbjct: 1149 LYF 1151
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 105 bits (263), Expect = 5e-21
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+S LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS A+RS
Sbjct: 1093 VRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWASTASRS 1152
Query: 185 LHF 193
L+F
Sbjct: 1153 LYF 1155
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
tuberosum]
Length = 1170
Score = 104 bits (259), Expect = 1e-20
Identities = 49/63 (77%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
+RETAIQCL A+SELPHARIYP+RT+VL+A +KALDDPKR VR EAV+CR AWASIA+RS
Sbjct: 1108 IRETAIQCLGAMSELPHARIYPMRTQVLQAITKALDDPKRAVRLEAVKCRLAWASIASRS 1167
Query: 185 LHF 193
+HF
Sbjct: 1168 IHF 1170
>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
lycopersicum]
Length = 1153
Score = 104 bits (259), Expect = 1e-20
Identities = 48/63 (76%), Positives = 58/63 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
+RETAIQC A+SELPHARIYP+RT+VL+A +KALDDPKR+VR EAV+CR AWASIA+RS
Sbjct: 1091 IRETAIQCFGAMSELPHARIYPMRTQVLQAITKALDDPKRVVRLEAVKCRLAWASIASRS 1150
Query: 185 LHF 193
+HF
Sbjct: 1151 IHF 1153
>ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495813 [Cicer arietinum]
Length = 1138
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/64 (78%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI-ATR 181
VRETAIQCLVA+S LPHARIYPLRT+VLRA K LDD KR VR+EAV+CRQAWASI ++R
Sbjct: 1075 VRETAIQCLVALSMLPHARIYPLRTQVLRAIPKCLDDTKRSVRREAVKCRQAWASITSSR 1134
Query: 182 SLHF 193
SL F
Sbjct: 1135 SLRF 1138
>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
excision repair protein-like protein [Medicago
truncatula]
Length = 1140
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/64 (78%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIA-TR 181
VRETAIQCLVA+SELPH RIYPLRT+VL+A K LDD KR VR EAV+CRQAWASIA +R
Sbjct: 1077 VRETAIQCLVALSELPHVRIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASSR 1136
Query: 182 SLHF 193
SL F
Sbjct: 1137 SLRF 1140
>gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
Length = 1145
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA+SELPH+RIYP+RT+VL+A SK LDD +R+VR EAV+CRQ WAS+++R
Sbjct: 1084 VRETAIQCLVALSELPHSRIYPMRTQVLQAISKCLDDTRRVVRYEAVKCRQTWASMSSRG 1143
Query: 185 L 187
L
Sbjct: 1144 L 1144
>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
gi|548857353|gb|ERN15159.1| hypothetical protein
AMTR_s00056p00136660 [Amborella trichopoda]
Length = 1160
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 184
VRETAIQCLVA++ LPHARIYP+R +VL SKALDD KR VRQEAVRC WAS+A+RS
Sbjct: 1098 VRETAIQCLVAMAALPHARIYPMRLQVLETVSKALDDQKRSVRQEAVRCHHVWASMASRS 1157
Query: 185 LHF 193
L F
Sbjct: 1158 LRF 1160
>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
gi|550342418|gb|ERP63247.1| hypothetical protein
POPTR_0003s04720g [Populus trichocarpa]
Length = 913
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 172
VRET IQCLVA+SELPH RIYP+R +VL+A SKALDDPKR VRQEAVRCRQAW+ I
Sbjct: 858 VRETTIQCLVAMSELPHTRIYPMRIQVLQAVSKALDDPKRAVRQEAVRCRQAWSVI 913
>ref|XP_002304218.1| predicted protein [Populus trichocarpa]
Length = 93
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 172
VRET IQCLVA+SELPH RIYP+R +VL+A SKALDDPKR VRQEAVRCRQAW+ I
Sbjct: 38 VRETTIQCLVAMSELPHTRIYPMRIQVLQAVSKALDDPKRAVRQEAVRCRQAWSVI 93
>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
Length = 1210
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWA 166
VRET IQCLVA+S+LPH RIYP+RTKVL+A SKALDDPKR VRQEAVRC+QAW+
Sbjct: 1122 VRETTIQCLVAMSKLPHTRIYPMRTKVLQAMSKALDDPKRAVRQEAVRCQQAWS 1175
>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X4 [Glycine max]
Length = 1095
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 172
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1040 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1095
>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Glycine max]
Length = 1102
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 172
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1047 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1102
>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Glycine max]
Length = 1133
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 5 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 172
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1078 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1133