BLASTX nr result
ID: Rauwolfia21_contig00057969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00057969
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS62594.1| hypothetical protein M569_12195, partial [Genlise... 62 8e-08
gb|EXB55387.1| DEAD-box ATP-dependent RNA helicase 35 [Morus not... 62 1e-07
ref|NP_195063.1| putative DEAD-box ATP-dependent RNA helicase 43... 62 1e-07
ref|XP_004303276.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 61 1e-07
ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putativ... 61 2e-07
ref|XP_002333939.1| predicted protein [Populus trichocarpa] 61 2e-07
ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|5... 61 2e-07
ref|XP_006356229.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 2e-07
ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 2e-07
ref|XP_006341396.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 3e-07
ref|XP_004235903.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 3e-07
gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus not... 60 4e-07
ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citr... 60 4e-07
gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus pe... 60 4e-07
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
ref|XP_002465295.1| hypothetical protein SORBIDRAFT_01g035760 [S... 59 9e-07
gb|ACR35233.1| unknown [Zea mays] gi|413955780|gb|AFW88429.1| pu... 59 9e-07
>gb|EPS62594.1| hypothetical protein M569_12195, partial [Genlisea aurea]
Length = 591
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + QIAS + + GS GYRG+
Sbjct: 544 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMQIASSRRDYFGSGGYRGE 590
>gb|EXB55387.1| DEAD-box ATP-dependent RNA helicase 35 [Morus notabilis]
Length = 432
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR NCPK ++ N IAS + + GS GYRG+
Sbjct: 385 ASGVKGCAYCGGLGHRIINCPKLAQQKNSAIASSRRDYFGSGGYRGE 431
>ref|NP_195063.1| putative DEAD-box ATP-dependent RNA helicase 43 [Arabidopsis
thaliana] gi|75337897|sp|Q9SZB4.1|RH43_ARATH RecName:
Full=Putative DEAD-box ATP-dependent RNA helicase 43
gi|4490304|emb|CAB38795.1| putative protein [Arabidopsis
thaliana] gi|7270285|emb|CAB80054.1| putative protein
[Arabidopsis thaliana] gi|332660816|gb|AEE86216.1|
putative DEAD-box ATP-dependent RNA helicase 43
[Arabidopsis thaliana]
Length = 542
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR CPK+E + + I+S K H GS GYRG+
Sbjct: 495 ASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGE 541
>ref|XP_004303276.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Fragaria
vesca subsp. vesca]
Length = 585
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E++ + QI+S + + GS GYRG+
Sbjct: 538 ASGVKGCAYCGGLGHRIKDCPKLEQQKSVQISSTRRDYYGSGGYRGE 584
>ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531759|gb|EEF33579.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 500
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + ++Q+A+ + + GS GYRG+
Sbjct: 453 ASGVKGCAYCGGLGHRIRDCPKLEHQRSQQLANSRRDYFGSGGYRGE 499
>ref|XP_002333939.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + ++Q+A+ + + GS GYRG+
Sbjct: 191 ASGVKGCAYCGGLGHRIRDCPKLEHQRSQQLANSRRDYFGSGGYRGE 237
>ref|XP_002328711.1| predicted protein [Populus trichocarpa]
gi|566168218|ref|XP_006385035.1| DEAD-box protein
abstrakt [Populus trichocarpa]
gi|550341803|gb|ERP62832.1| DEAD-box protein abstrakt
[Populus trichocarpa]
Length = 587
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + ++Q+A+ + + GS GYRG+
Sbjct: 540 ASGVKGCAYCGGLGHRIRDCPKLEHQRSQQLANSRRDYFGSGGYRGE 586
>ref|XP_006356229.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
tuberosum]
Length = 595
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK + + ++QIA+ + + GS GYRG+
Sbjct: 548 ASGVKGCAYCGGLGHRIRDCPKLDHQRSQQIANSRRDYFGSGGYRGE 594
>ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
lycopersicum]
Length = 595
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK + + ++QIA+ + + GS GYRG+
Sbjct: 548 ASGVKGCAYCGGLGHRIRDCPKLDHQRSQQIANSRRDYFGSGGYRGE 594
>ref|XP_006341396.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
tuberosum]
Length = 589
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + QIA+ + + GS GYRG+
Sbjct: 542 ASGVKGCAYCGGLGHRIRDCPKLEHQKSVQIANSRRDYFGSGGYRGE 588
>ref|XP_004235903.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
lycopersicum]
Length = 595
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + QIA+ + + GS GYRG+
Sbjct: 548 ASGVKGCAYCGGLGHRIRDCPKLEHQKSVQIANSRRDYFGSGGYRGE 594
>gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus notabilis]
Length = 587
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK ++ N IAS + + GS GYRG+
Sbjct: 540 ASGVKGCAYCGGLGHRIIDCPKLAQQKNSAIASSRRDYFGSGGYRGE 586
>ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
[Citrus sinensis] gi|568878211|ref|XP_006492097.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
isoform X2 [Citrus sinensis]
gi|568878213|ref|XP_006492098.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 35-like isoform X3 [Citrus
sinensis]
Length = 588
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 541 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 587
>ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citrus clementina]
gi|557529439|gb|ESR40689.1| hypothetical protein
CICLE_v10025231mg [Citrus clementina]
Length = 588
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 541 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 587
>gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus persica]
Length = 587
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 540 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 586
>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
sativus]
Length = 597
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 550 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 596
>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
sativus]
Length = 597
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 550 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 596
>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
vinifera] gi|147861063|emb|CAN78736.1| hypothetical
protein VITISV_003102 [Vitis vinifera]
gi|297743544|emb|CBI36411.3| unnamed protein product
[Vitis vinifera]
Length = 587
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 2 ASGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
ASGVKGC CGGLGHR +CPK E + + IAS + + GS GYRG+
Sbjct: 540 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 586
>ref|XP_002465295.1| hypothetical protein SORBIDRAFT_01g035760 [Sorghum bicolor]
gi|241919149|gb|EER92293.1| hypothetical protein
SORBIDRAFT_01g035760 [Sorghum bicolor]
Length = 618
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +2
Query: 5 SGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
SGVKGC CGGLGHR S+CPK E + + IA K + G GYRG+
Sbjct: 572 SGVKGCAYCGGLGHRVSDCPKLEHQKSMAIAGSRKDYFGGGGYRGE 617
>gb|ACR35233.1| unknown [Zea mays] gi|413955780|gb|AFW88429.1| putative DEAD-box
ATP-dependent RNA helicase family protein [Zea mays]
Length = 618
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +2
Query: 5 SGVKGCPNCGGLGHRTSNCPKWEKEGNRQIASLTKYHLGSRGYRGK 142
SGVKGC CGGLGHR S+CPK E + + IA K + G GYRG+
Sbjct: 572 SGVKGCAYCGGLGHRVSDCPKLEHQKSMAIAGSRKDYFGGGGYRGE 617