BLASTX nr result

ID: Rauwolfia21_contig00057722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00057722
         (288 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251526.1| PREDICTED: TBC1 domain family member 2A-like...    57   3e-06
ref|XP_004251525.1| PREDICTED: TBC1 domain family member 2A-like...    57   3e-06
ref|XP_006357988.1| PREDICTED: TBC1 domain family member 2B-like...    56   6e-06
ref|XP_004243501.1| PREDICTED: TBC1 domain family member 2A-like...    56   6e-06

>ref|XP_004251526.1| PREDICTED: TBC1 domain family member 2A-like isoform 2 [Solanum
           lycopersicum]
          Length = 344

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/78 (46%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
 Frame = -2

Query: 287 ALEFDVSLVCTEWFLCLFSKSLPSEVDLSDF-------------VLIAELKKNIHPLLSM 147
           ALEFDVSLVCTEWFLCLF+KSLPSE  L  +             V +A  K N   LL++
Sbjct: 215 ALEFDVSLVCTEWFLCLFAKSLPSETTLRVWDVLFNEGANLLFHVALAIFKMNEEELLTV 274

Query: 146 *QPWDPLQ-STICTHSTF 96
               D +     CTH  F
Sbjct: 275 HHVGDVIHIIQRCTHQLF 292


>ref|XP_004251525.1| PREDICTED: TBC1 domain family member 2A-like isoform 1 [Solanum
           lycopersicum] gi|565370727|ref|XP_006351970.1|
           PREDICTED: TBC1 domain family member 2B-like [Solanum
           tuberosum]
          Length = 394

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/78 (46%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
 Frame = -2

Query: 287 ALEFDVSLVCTEWFLCLFSKSLPSEVDLSDF-------------VLIAELKKNIHPLLSM 147
           ALEFDVSLVCTEWFLCLF+KSLPSE  L  +             V +A  K N   LL++
Sbjct: 265 ALEFDVSLVCTEWFLCLFAKSLPSETTLRVWDVLFNEGANLLFHVALAIFKMNEEELLTV 324

Query: 146 *QPWDPLQ-STICTHSTF 96
               D +     CTH  F
Sbjct: 325 HHVGDVIHIIQRCTHQLF 342


>ref|XP_006357988.1| PREDICTED: TBC1 domain family member 2B-like [Solanum tuberosum]
          Length = 394

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 287 ALEFDVSLVCTEWFLCLFSKSLPSEVDL 204
           +LEFDVSLVCTEWFLCLFSKSLPSE  L
Sbjct: 265 SLEFDVSLVCTEWFLCLFSKSLPSETTL 292


>ref|XP_004243501.1| PREDICTED: TBC1 domain family member 2A-like [Solanum lycopersicum]
          Length = 394

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 287 ALEFDVSLVCTEWFLCLFSKSLPSEVDL 204
           +LEFDVSLVCTEWFLCLFSKSLPSE  L
Sbjct: 265 SLEFDVSLVCTEWFLCLFSKSLPSETTL 292


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