BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00057674
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   114   1e-23
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   113   3e-23
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   110   3e-22
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   110   3e-22
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...   103   2e-20
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]               103   2e-20
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr...   103   3e-20
ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-li...   102   4e-20
ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-li...   102   4e-20
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li...   101   9e-20
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...   100   2e-19
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe...   100   3e-19
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]        98   1e-18
gb|AFK40175.1| unknown [Medicago truncatula]                           98   1e-18
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru...    98   1e-18
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...    97   2e-18
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus...    97   3e-18
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part...    97   3e-18
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr...    96   7e-18
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...    95   1e-17

>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASGF-EEPTDPTIA 57
           VQP KRCS+     QP+ GCRFMYDR E KF+FLE+RI+   T LVASG  EEPTDPT+A
Sbjct: 184 VQPIKRCSLQIISSQPEPGCRFMYDRTENKFNFLESRIKDHTTALVASGLHEEPTDPTVA 243

Query: 56  SQRSIFAVGMICCEEEGQ 3
           SQRS+FAVGMICCEEEG+
Sbjct: 244 SQRSVFAVGMICCEEEGR 261


>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
           lycopersicum]
          Length = 617

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASGF-EEPTDPTIA 57
           VQP KRCS+     +P+ GCRFMYDR E KF+FLE+RI+   T LVASG  EEPTDPT+A
Sbjct: 184 VQPIKRCSLQIISSKPEPGCRFMYDRTENKFNFLESRIKDHTTALVASGLHEEPTDPTVA 243

Query: 56  SQRSIFAVGMICCEEEGQ 3
           SQRS+FAVGMICCEEEG+
Sbjct: 244 SQRSVFAVGMICCEEEGR 261


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQPSKRCS+   G +P  GCRFMYDRIE +F+ LENRI+K  T LVA+G ++EPTDPT+A
Sbjct: 188 VQPSKRCSLLVHGSRPGPGCRFMYDRIEDRFNSLENRIKKHTTALVATGLYKEPTDPTVA 247

Query: 56  SQRSIFAVGMICCEEEGQ 3
           SQ+S+FA GMICC+ EG+
Sbjct: 248 SQKSVFATGMICCDGEGR 265


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/78 (66%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQP K+CS    G  P+ GCRFMYDRIE +F+ L+NRIRK A  LVASG +EEPTDPT+A
Sbjct: 187 VQPRKKCSFVVHGSGPEPGCRFMYDRIEDRFNALDNRIRKHAAALVASGLYEEPTDPTVA 246

Query: 56  SQRSIFAVGMICCEEEGQ 3
           SQR++FAVGMICC+ EG+
Sbjct: 247 SQRNVFAVGMICCDGEGR 264


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
           gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
           B family protein [Populus trichocarpa]
          Length = 618

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 QPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIAS 54
           QP KRCS+      P+ GCRFMYD+IE +F+ LENRIRK A  L ASG +EEP DPT+AS
Sbjct: 187 QPCKRCSLMVHRLGPEPGCRFMYDKIEDRFNALENRIRKHAIALFASGLYEEPMDPTVAS 246

Query: 53  QRSIFAVGMICCEEEGQ 3
           QR+IFAVGMICC+ EG+
Sbjct: 247 QRNIFAVGMICCDGEGR 263


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
 Frame = -1

Query: 233 VQPSKRCS--IHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPT 63
           +QP KRCS  +H+SG +P  GCRFMYDRIE  F+ LENRIRK A  LVASG ++EP DP+
Sbjct: 186 IQPQKRCSLVVHSSGPEP--GCRFMYDRIEDGFNALENRIRKHAAALVASGLYQEPMDPS 243

Query: 62  IASQRSIFAVGMICCEEEG 6
           +ASQRSIFAVGMI C++EG
Sbjct: 244 VASQRSIFAVGMIFCDDEG 262


>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
           gi|557540306|gb|ESR51350.1| hypothetical protein
           CICLE_v10030973mg [Citrus clementina]
          Length = 620

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           V+  K+CS+   G  P+ GCRFMYDR E +F+ LENRIRK A  LV+SG +EEPTDPT+A
Sbjct: 185 VKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244

Query: 56  SQRSIFAVGMICCEEEG 6
           SQR++FAVGMICC+ +G
Sbjct: 245 SQRTLFAVGMICCDGDG 261


>ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Cicer
           arietinum]
          Length = 524

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ  KRCS+   G  PK GCRFMYDR E + + +E+RIRK A  LVASG +EEPTDPT+A
Sbjct: 188 VQTRKRCSLVFHGSGPKPGCRFMYDRTEDRINAIESRIRKHARALVASGLYEEPTDPTVA 247

Query: 56  SQRSIFAVGMICCEEEGQ 3
           S RSIFAVGMICC+ EG+
Sbjct: 248 SPRSIFAVGMICCDGEGR 265


>ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Cicer
           arietinum]
          Length = 616

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ  KRCS+   G  PK GCRFMYDR E + + +E+RIRK A  LVASG +EEPTDPT+A
Sbjct: 188 VQTRKRCSLVFHGSGPKPGCRFMYDRTEDRINAIESRIRKHARALVASGLYEEPTDPTVA 247

Query: 56  SQRSIFAVGMICCEEEGQ 3
           S RSIFAVGMICC+ EG+
Sbjct: 248 SPRSIFAVGMICCDGEGR 265


>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
          Length = 620

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           V+  ++CS+   G  P+ GCRFMYDR E +F+ LENRIRK A  LV+SG +EEPTDPT+A
Sbjct: 185 VKTGEKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244

Query: 56  SQRSIFAVGMICCEEEG 6
           SQR++FAVGMICC+ +G
Sbjct: 245 SQRTLFAVGMICCDGDG 261


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
           subsp. vesca]
          Length = 620

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           V+P KRCS+   G  P++ CRFMYDRI  +F+ LENRI K AT LV+SG +EEP DPT++
Sbjct: 188 VKPGKRCSLVVHGSGPEIDCRFMYDRIADRFNALENRILKHATELVSSGQYEEPVDPTVS 247

Query: 56  SQRSIFAVGMICCEEEG 6
           S++SIF VGMICC+ EG
Sbjct: 248 SEKSIFTVGMICCDGEG 264


>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
          Length = 612

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           V+P KRCS+   G  P++GCRFMYDRIE +F+ LENRI K AT LV+SG +EEP DPT++
Sbjct: 187 VKPGKRCSLIVHGSGPEIGCRFMYDRIEDRFNALENRISKYATALVSSGQYEEPLDPTVS 246

Query: 56  SQRSIFAVGMICCEEEG 6
           SQ+ IF VGMI C+ EG
Sbjct: 247 SQKIIFTVGMIYCDGEG 263


>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
          Length = 670

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           +QP +RCS+   G +P  GCRFMYDRIE +F+ LE+RIRK A    +S  +EEP DPT++
Sbjct: 186 IQPGRRCSLIVHGSKPGTGCRFMYDRIEDRFNALESRIRKYAVAFTSSKLYEEPVDPTVS 245

Query: 56  SQRSIFAVGMICCEEEG 6
           SQ+SIF VGMICC+ EG
Sbjct: 246 SQKSIFTVGMICCDGEG 262


>gb|AFK40175.1| unknown [Medicago truncatula]
          Length = 447

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 KRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIASQRS 45
           KRCS+   G  PK GCRFMYDR E K + +ENRI+K A  LVASG +EEPTDP+IAS RS
Sbjct: 190 KRCSLVIHGSGPKPGCRFMYDRTEDKINAIENRIKKHARALVASGLYEEPTDPSIASPRS 249

Query: 44  IFAVGMICCEEEGQ 3
            F++GMICC+ EG+
Sbjct: 250 FFSIGMICCDGEGR 263


>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
           gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
           B [Medicago truncatula]
          Length = 616

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 KRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIASQRS 45
           KRCS+   G  PK GCRFMYDR E K + +ENRI+K A  LVASG +EEPTDP+IAS RS
Sbjct: 190 KRCSLVIHGSGPKPGCRFMYDRTEDKINAIENRIKKHARALVASGLYEEPTDPSIASPRS 249

Query: 44  IFAVGMICCEEEGQ 3
            F++GMICC+ EG+
Sbjct: 250 FFSIGMICCDGEGR 263


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ S+RCS+  +G  P+ GCRFMYDR E +F+ LENRI + A    ASG +EE  DP +A
Sbjct: 187 VQTSQRCSLEVNGSGPEPGCRFMYDRTEDRFNVLENRIVRHADAFAASGLYEEQVDPAVA 246

Query: 56  SQRSIFAVGMICCEEEG 6
           SQRSIFAVGMICC+ EG
Sbjct: 247 SQRSIFAVGMICCDGEG 263


>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
          Length = 625

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/80 (63%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
 Frame = -1

Query: 233 VQPSKRCS--IHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPT 63
           V   +RCS  IH SG +P  GCRFMYDR E + + +ENRIRK     VASG +EEPTDPT
Sbjct: 191 VPQRERCSLVIHGSGLKP--GCRFMYDRTEDRLNAIENRIRKHTRAFVASGLYEEPTDPT 248

Query: 62  IASQRSIFAVGMICCEEEGQ 3
            ASQRSIFAVGMICC+ EG+
Sbjct: 249 SASQRSIFAVGMICCDAEGR 268


>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
           gi|482569343|gb|EOA33531.1| hypothetical protein
           CARUB_v10019947mg, partial [Capsella rubella]
          Length = 639

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ S+RCS+  +G  P+ GCRFMYDR E +F+ LENRI + A    ASG +EE  DP +A
Sbjct: 207 VQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFNALENRIIRHADAFAASGLYEEQVDPAVA 266

Query: 56  SQRSIFAVGMICCEEEG 6
           SQRSIFAVGMICC+ EG
Sbjct: 267 SQRSIFAVGMICCDGEG 283


>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
           gi|557087677|gb|ESQ28529.1| hypothetical protein
           EUTSA_v10018287mg [Eutrema salsugineum]
          Length = 622

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ S RCS+  +G  P+ GCRFMYDR E +F+ LENRI + A    ASG ++E  DP +A
Sbjct: 190 VQTSHRCSLKVNGSGPEAGCRFMYDRTEDRFNALENRIIRHADAFAASGLYDEQVDPAVA 249

Query: 56  SQRSIFAVGMICCEEEG 6
           SQRSIFAVGMICC+ EG
Sbjct: 250 SQRSIFAVGMICCDGEG 266


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
           gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
           thaliana]
          Length = 620

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 VQPSKRCSIHASGCQPKLGCRFMYDRIEAKFSFLENRIRKRATTLVASG-FEEPTDPTIA 57
           VQ S+RCS+  +G  P+ GCRFMYDR E +FS LE RI + A    ASG +EE  DP +A
Sbjct: 188 VQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEEQVDPAVA 247

Query: 56  SQRSIFAVGMICCEEEG 6
           SQRSIFAVGMICC+ EG
Sbjct: 248 SQRSIFAVGMICCDGEG 264