BLASTX nr result
ID: Rauwolfia21_contig00057625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00057625
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 89 2e-17
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera] 86 2e-17
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 87 5e-17
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 86 1e-16
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 85 2e-16
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 85 2e-16
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 80 4e-16
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera] 84 4e-16
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 83 5e-16
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300... 80 5e-16
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 82 8e-16
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 82 8e-16
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe... 78 1e-15
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe... 77 2e-15
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 86 2e-15
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 81 2e-15
gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus pe... 77 2e-15
gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum] 75 5e-15
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe... 76 9e-15
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom... 82 9e-15
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 89.0 bits (219), Expect(2) = 2e-17
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = -3
Query: 188 VPSVNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAA 9
V SV FLG+IVSSKGI+ + TKI+AI +WPT K+ + VRSFH LASFY+RF++DFS++AA
Sbjct: 854 VESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAA 913
Query: 8 PL 3
PL
Sbjct: 914 PL 915
Score = 25.8 bits (55), Expect(2) = 2e-17
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ +F L +LYAN++KC F
Sbjct: 830 HLKEVFLVLRREQLYANLEKCYF 852
>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
Length = 771
Score = 85.5 bits (210), Expect(2) = 2e-17
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+VS+KGI+ + K+KAI EWPT K +++VRSFH LASFY+RF++DFS +AAPL
Sbjct: 301 VVFLGYVVSAKGIEVDEEKVKAIKEWPTPKLITEVRSFHGLASFYRRFVKDFSILAAPL 359
Score = 29.3 bits (64), Expect(2) = 2e-17
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 261 SHMCALFDALLENKLYANMDKCEF 190
+H+ + D L + KLYAN+ KC F
Sbjct: 273 NHLHCVLDVLRKXKLYANLKKCSF 296
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 87.0 bits (214), Expect(2) = 5e-17
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+VS+KGI+ + K+KAI EWPT KS+++VRSFH LASFY RF++DFS++AAPL
Sbjct: 394 VVFLGYVVSAKGIEVDEEKLKAIKEWPTPKSITEVRSFHGLASFYFRFVKDFSTLAAPL 452
Score = 26.2 bits (56), Expect(2) = 5e-17
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 261 SHMCALFDALLENKLYANMDKCEF 190
+H+ + L + KLYAN+ KC F
Sbjct: 366 NHLHCVLAILRKEKLYANLKKCSF 389
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 85.9 bits (211), Expect(2) = 1e-16
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLG+IVSSKG+ + K+KAI EWP K+VS+VRSFH LASFY+RF++DFS++AAPL
Sbjct: 804 VIFLGFIVSSKGVHVDEEKVKAIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPL 862
Score = 25.8 bits (55), Expect(2) = 1e-16
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ A+ L LYAN++KC F
Sbjct: 777 HLKAVLQVLRYENLYANLEKCVF 799
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 85.1 bits (209), Expect(2) = 2e-16
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -3
Query: 188 VPSVNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAA 9
V V FLG++VSS G++ + KIKAI EWP SV++VRSFH LASFY+RF+RDFS++AA
Sbjct: 894 VDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAA 953
Query: 8 PL 3
PL
Sbjct: 954 PL 955
Score = 26.2 bits (56), Expect(2) = 2e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ +F+ L +L+AN+ KC F
Sbjct: 870 HLKKVFEVLRNQRLFANLKKCTF 892
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 85.1 bits (209), Expect(2) = 2e-16
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -3
Query: 188 VPSVNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAA 9
V V FLG++VSS G++ + KIKAI EWP SV++VRSFH LASFY+RF+RDFS++AA
Sbjct: 894 VDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAA 953
Query: 8 PL 3
PL
Sbjct: 954 PL 955
Score = 26.2 bits (56), Expect(2) = 2e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ +F+ L +L+AN+ KC F
Sbjct: 870 HLKKVFEVLRNQRLFANLKKCTF 892
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 79.7 bits (195), Expect(2) = 4e-16
Identities = 34/59 (57%), Positives = 47/59 (79%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLG+I+S +GI + K+KAI WP K+++DVRSFH LASFY+RFI+DFS++ AP+
Sbjct: 800 VQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPI 858
Score = 30.4 bits (67), Expect(2) = 4e-16
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ LF+ L E+KLY ++KC F
Sbjct: 773 HLQVLFETLREHKLYGKLEKCSF 795
>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
Length = 1089
Score = 83.6 bits (205), Expect(2) = 4e-16
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+VS KGI+ + K+KAI EWPT KS+ +VRSFH L SFY+RF++DFS++A PL
Sbjct: 640 VVFLGYVVSXKGIEVDEEKVKAIKEWPTPKSIXEVRSFHGLXSFYRRFVKDFSTLAIPL 698
Score = 26.6 bits (57), Expect(2) = 4e-16
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + L + KLYAN+ KC F
Sbjct: 613 HLHCVLTVLRKEKLYANLKKCSF 635
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 82.8 bits (203), Expect(2) = 5e-16
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLG++VS+ G+K + K+KAI EWP+ KSV +VRSFH LA FY+RF++DFS++AAPL
Sbjct: 1108 FLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPL 1164
Score = 26.9 bits (58), Expect(2) = 5e-16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + + L + KLYAN+ KC F
Sbjct: 1079 HLKMVLEVLRKEKLYANLKKCTF 1101
>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
subsp. vesca]
Length = 1034
Score = 80.1 bits (196), Expect(2) = 5e-16
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLGY+VSS+GI + K+KAI EWPT K+V DVRSFH LA+FY+ F+ +FS++ AP+
Sbjct: 861 FLGYVVSSEGINVDQDKVKAIQEWPTPKTVGDVRSFHGLATFYRHFVPNFSAITAPI 917
Score = 29.6 bits (65), Expect(2) = 5e-16
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + + L ENKLY N+ KC F
Sbjct: 832 HLRKVLEVLQENKLYVNLKKCSF 854
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 82.0 bits (201), Expect(2) = 8e-16
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+VS+KGI+ + +K+I EWPT K +++VRSFH LASFY+RF++DFS++ APL
Sbjct: 596 VVFLGYVVSAKGIEVDEENVKSIKEWPTPKLITEVRSFHGLASFYRRFVKDFSTLVAPL 654
Score = 26.9 bits (58), Expect(2) = 8e-16
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 261 SHMCALFDALLENKLYANMDKCEF 190
+H+ + L + KLYAN+ KC F
Sbjct: 568 NHLHCVLXVLRKEKLYANLKKCSF 591
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 81.6 bits (200), Expect(2) = 8e-16
Identities = 35/59 (59%), Positives = 50/59 (84%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLG++VS +G++ + K+KAI EWPT K++S+VR FH LASFY+RF++DFS++AAPL
Sbjct: 77 VVFLGFVVSVEGVRVDVEKVKAIQEWPTPKTLSEVRGFHGLASFYRRFVKDFSTLAAPL 135
Score = 27.3 bits (59), Expect(2) = 8e-16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + L + KLYAN++KC F
Sbjct: 50 HLQFVLSVLRKEKLYANLEKCSF 72
>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 77.8 bits (190), Expect(2) = 1e-15
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLG++V GI+ + KIKAI +WP K+VS+VRSFH LA+FY RF+R FSS+AAP+
Sbjct: 832 FLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYMRFVRHFSSIAAPI 888
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + D L ENKLY N+ KC F
Sbjct: 803 HLRQVLDVLRENKLYVNLKKCTF 825
>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 77.4 bits (189), Expect(2) = 2e-15
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLG++V GI+ + KIKAI +WPT K VS+VRSFH LA+FY+RF+R FSS+ AP+
Sbjct: 814 FLGFVVGENGIQVDDEKIKAILDWPTPKIVSEVRSFHGLATFYRRFVRHFSSITAPI 870
Score = 30.4 bits (67), Expect(2) = 2e-15
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + D L ENKLY N+ KC F
Sbjct: 785 HLRQVLDVLRENKLYMNLKKCTF 807
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 85.9 bits (211), Expect(2) = 2e-15
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+VS KGI+ + K+KAI EWPT S+++VRSFH LASFY+RF++DFS++AAPL
Sbjct: 711 VVFLGYVVSXKGIEVDEEKVKAIKEWPTPXSITEVRSFHGLASFYRRFVKDFSTLAAPL 769
Score = 21.9 bits (45), Expect(2) = 2e-15
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 261 SHMCALFDALLENKLYANMDKCEF 190
+H+ + L + KLYAN+ K F
Sbjct: 683 NHLHCVLAXLRKEKLYANLKKFSF 706
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 80.9 bits (198), Expect(2) = 2e-15
Identities = 35/62 (56%), Positives = 51/62 (82%)
Frame = -3
Query: 188 VPSVNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAA 9
V V FLG++VS++G++ + +K++AI +WPT +V+ VRSFH LASFY+RF++DFSS AA
Sbjct: 72 VDKVVFLGFVVSAQGVEVDESKVEAIRDWPTPTTVTQVRSFHGLASFYRRFVKDFSSKAA 131
Query: 8 PL 3
PL
Sbjct: 132 PL 133
Score = 26.9 bits (58), Expect(2) = 2e-15
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + +AL KLYAN KC F
Sbjct: 48 HLRQVLEALRAEKLYANFKKCAF 70
>gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
Length = 1384
Score = 76.6 bits (187), Expect(2) = 2e-15
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLG++V GI+ + KIKAI +WP K+VS+VRSFH LA+FY+RF+R FSS+ AP+
Sbjct: 749 FLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPI 805
Score = 30.8 bits (68), Expect(2) = 2e-15
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + D L ENKLY N+ KC F
Sbjct: 720 HLRQVLDVLRENKLYVNLKKCTF 742
>gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum]
Length = 276
Score = 75.1 bits (183), Expect(2) = 5e-15
Identities = 33/59 (55%), Positives = 46/59 (77%)
Frame = -3
Query: 179 VNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
V FLGY+V+ +GI+ + KI AI WPT ++++ VRSF LA FY+RF+RDFS++AAPL
Sbjct: 117 VAFLGYVVTPQGIEVDGAKIDAIRSWPTPQTITQVRSFLGLAGFYRRFVRDFSTIAAPL 175
Score = 31.2 bits (69), Expect(2) = 5e-15
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ A+FDAL LYAN++KC F
Sbjct: 90 HLRAVFDALRAASLYANLEKCIF 112
>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 76.3 bits (186), Expect(2) = 9e-15
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = -3
Query: 173 FLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAPL 3
FLG++V GI+ + KIKAI +WP K+VS+VRSFH LA+FY+RF+R FSS+ AP+
Sbjct: 824 FLGFVVGEHGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPI 880
Score = 29.3 bits (64), Expect(2) = 9e-15
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + D L ENKL+ N+ KC F
Sbjct: 795 HLRQVLDVLRENKLFVNLKKCTF 817
>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1452
Score = 81.6 bits (200), Expect(2) = 9e-15
Identities = 36/61 (59%), Positives = 50/61 (81%)
Frame = -3
Query: 185 PSVNFLGYIVSSKGIKANSTKIKAINEWPTRKSVSDVRSFHDLASFYQRFIRDFSSVAAP 6
P V FLG+IVS++G+K + KI+AI+EWP S+ +VRSFH LASFY+RFIR+FSS+ +P
Sbjct: 735 PEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSP 794
Query: 5 L 3
+
Sbjct: 795 I 795
Score = 23.9 bits (50), Expect(2) = 9e-15
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 258 HMCALFDALLENKLYANMDKCEF 190
H+ + + L + +LY N+ KC F
Sbjct: 710 HLRQVLEVLQKEQLYINLKKCSF 732